RNA–Protein interactions for RNA: ENST00000394961.6

SMARCAD1-203, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2

Gene SMARCAD1, Length 3,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-203ENST00000394961 NT5C1AQ9BXI3 368 aa6.56□□□□□ -1.36
SMARCAD1-203ENST00000394961 GMIPQ9P107 970 aa6.56□□□□□ -1.36
SMARCAD1-203ENST00000394961 ADAMTS1Q9UHI8 967 aa6.56□□□□□ -1.36
SMARCAD1-203ENST00000394961 MYOFQ9NZM1 2061 aa6.56□□□□□ -1.36
SMARCAD1-203ENST00000394961 TAF4O00268 1085 aa6.56□□□□□ -1.36
SMARCAD1-203ENST00000394961 XPO1O14980 1071 aaKnown RBP6.56□□□□□ -1.36
SMARCAD1-203ENST00000394961 AP1G2O75843 785 aa6.56□□□□□ -1.36
SMARCAD1-203ENST00000394961 RPL13P26373 211 aaKnown RBP6.56□□□□□ -1.36
SMARCAD1-203ENST00000394961 VAMP7P51809 220 aa6.56□□□□□ -1.36
SMARCAD1-203ENST00000394961 KMT5BQ4FZB7 885 aa6.56□□□□□ -1.36
SMARCAD1-203ENST00000394961 WDR45BQ5MNZ6 344 aa6.56□□□□□ -1.36
SMARCAD1-203ENST00000394961 USP30Q70CQ3 517 aa6.56□□□□□ -1.36
SMARCAD1-203ENST00000394961 SV2AQ7L0J3 742 aa6.56□□□□□ -1.36
SMARCAD1-203ENST00000394961 SCD5Q86SK9 330 aa6.56□□□□□ -1.36
SMARCAD1-203ENST00000394961 CEP57L1Q8IYX8 460 aa6.56□□□□□ -1.36
SMARCAD1-203ENST00000394961 ALLCQ8N6M5 410 aa6.56□□□□□ -1.36
SMARCAD1-203ENST00000394961 TXNDC5Q8NBS9 432 aaKnown RBP6.56□□□□□ -1.36
SMARCAD1-203ENST00000394961 IPO4Q8TEX9 1081 aaKnown RBP6.56□□□□□ -1.36
SMARCAD1-203ENST00000394961 KRT82Q9NSB4 513 aa6.56□□□□□ -1.36
SMARCAD1-203ENST00000394961 WSB2Q9NYS7 404 aaPredicted RBP6.56□□□□□ -1.36
SMARCAD1-203ENST00000394961 A0A1B0GTW7 788 aa6.56□□□□□ -1.36
SMARCAD1-203ENST00000394961 STC2O76061 302 aa6.56□□□□□ -1.36
SMARCAD1-203ENST00000394961 PAEPP09466 180 aa6.56□□□□□ -1.36
SMARCAD1-203ENST00000394961 RALAP11233 206 aa6.56□□□□□ -1.36
SMARCAD1-203ENST00000394961 NCAM1P13591 858 aa6.56□□□□□ -1.36
SMARCAD1-203ENST00000394961 ENGP17813 658 aa6.56□□□□□ -1.36
SMARCAD1-203ENST00000394961 HOXC13P31276 330 aa6.56□□□□□ -1.36
SMARCAD1-203ENST00000394961 NDST1P52848 882 aa6.56□□□□□ -1.36
SMARCAD1-203ENST00000394961 CUL4BQ13620 913 aa6.56□□□□□ -1.36
SMARCAD1-203ENST00000394961 ZSCAN30Q86W11 494 aa6.56□□□□□ -1.36
SMARCAD1-203ENST00000394961 BBS7Q8IWZ6 715 aa6.56□□□□□ -1.36
SMARCAD1-203ENST00000394961 GOLGA1Q92805 767 aa6.56□□□□□ -1.36
SMARCAD1-203ENST00000394961 TIGD1Q96MW7 591 aa6.56□□□□□ -1.36
SMARCAD1-203ENST00000394961 SRRTQ9BXP5 876 aaKnown RBP6.56□□□□□ -1.36
SMARCAD1-203ENST00000394961 TMEM245Q9H330 911 aa6.56□□□□□ -1.36
SMARCAD1-203ENST00000394961 C4orf47A7E2U8 309 aa6.55□□□□□ -1.36
SMARCAD1-203ENST00000394961 TLR5O60602 858 aa6.55□□□□□ -1.36
SMARCAD1-203ENST00000394961 EXOC3O60645 756 aa6.55□□□□□ -1.36
SMARCAD1-203ENST00000394961 HLA-DRAP01903 254 aa6.55□□□□□ -1.36
SMARCAD1-203ENST00000394961 C1SP09871 688 aa6.55□□□□□ -1.36
SMARCAD1-203ENST00000394961 SETSIPP0DME0 302 aa6.55□□□□□ -1.36
SMARCAD1-203ENST00000394961 MFAP3P55082 362 aa6.55□□□□□ -1.36
SMARCAD1-203ENST00000394961 MARSP56192 900 aaKnown RBP6.55□□□□□ -1.36
SMARCAD1-203ENST00000394961 CCDC142Q17RM4 750 aa6.55□□□□□ -1.36
SMARCAD1-203ENST00000394961 SH3PXD2AQ5TCZ1 1133 aa6.55□□□□□ -1.36
SMARCAD1-203ENST00000394961 NAIF1Q69YI7 327 aaPredicted RBP6.55□□□□□ -1.36
SMARCAD1-203ENST00000394961 HEATR6Q6AI08 1181 aaKnown RBP6.55□□□□□ -1.36
SMARCAD1-203ENST00000394961 SDE2Q6IQ49 451 aa6.55□□□□□ -1.36
SMARCAD1-203ENST00000394961 ZNF513Q8N8E2 541 aaPredicted RBP6.55□□□□□ -1.36
SMARCAD1-203ENST00000394961 ANKRD52Q8NB46 1076 aa6.55□□□□□ -1.36
SMARCAD1-203ENST00000394961 TTC17Q96AE7 1141 aa6.55□□□□□ -1.36
SMARCAD1-203ENST00000394961 DHX58Q96C10 678 aa6.55□□□□□ -1.36
SMARCAD1-203ENST00000394961 TRIM62Q9BVG3 475 aa6.55□□□□□ -1.36
SMARCAD1-203ENST00000394961 EXOC1Q9NV70 894 aa6.55□□□□□ -1.36
SMARCAD1-203ENST00000394961 FRMD4BQ9Y2L6 1034 aa6.55□□□□□ -1.36
SMARCAD1-203ENST00000394961 TCRBV21S2A2A0A5A6 115 aa6.55□□□□□ -1.36
SMARCAD1-203ENST00000394961 POLR2DO15514 142 aaKnown RBP6.55□□□□□ -1.36
SMARCAD1-203ENST00000394961 PCDHGA12O60330 932 aa6.55□□□□□ -1.36
SMARCAD1-203ENST00000394961 OPHN1O60890 802 aa6.55□□□□□ -1.36
SMARCAD1-203ENST00000394961 CD6P30203 668 aa6.55□□□□□ -1.36
SMARCAD1-203ENST00000394961 PSMC2P35998 433 aaKnown RBP6.55□□□□□ -1.36
SMARCAD1-203ENST00000394961 COPAP53621 1224 aa6.55□□□□□ -1.36
SMARCAD1-203ENST00000394961 SFSWAPQ12872 951 aaKnown RBP6.55□□□□□ -1.36
SMARCAD1-203ENST00000394961 EIF4EBP2Q13542 120 aaPredicted RBP6.55□□□□□ -1.36
SMARCAD1-203ENST00000394961 SYCP2LQ5T4T6 812 aa6.55□□□□□ -1.36
SMARCAD1-203ENST00000394961 ACBD5Q5T8D3 534 aaPredicted RBP6.55□□□□□ -1.36
SMARCAD1-203ENST00000394961 SLC41A1Q8IVJ1 513 aa6.55□□□□□ -1.36
SMARCAD1-203ENST00000394961 UCMAQ8WVF2 138 aa6.55□□□□□ -1.36
SMARCAD1-203ENST00000394961 CCDC47Q96A33 483 aaKnown RBP6.55□□□□□ -1.36
SMARCAD1-203ENST00000394961 MMS19Q96T76 1030 aa6.55□□□□□ -1.36
SMARCAD1-203ENST00000394961 CCSER2Q9H7U1 834 aa6.55□□□□□ -1.36
SMARCAD1-203ENST00000394961 OSER1Q9NX31 292 aa6.55□□□□□ -1.36
SMARCAD1-203ENST00000394961 METTL12A8MUP2 240 aa6.55□□□□□ -1.36
SMARCAD1-203ENST00000394961 CER1O95813 267 aa6.55□□□□□ -1.36
SMARCAD1-203ENST00000394961 ASLP04424 464 aa6.55□□□□□ -1.36
SMARCAD1-203ENST00000394961 PDGFRBP09619 1106 aa6.55□□□□□ -1.36
SMARCAD1-203ENST00000394961 HOXB2P14652 356 aa6.55□□□□□ -1.36
SMARCAD1-203ENST00000394961 NDUFV2P19404 249 aa6.55□□□□□ -1.36
SMARCAD1-203ENST00000394961 RDXP35241 583 aaKnown RBP6.55□□□□□ -1.36
SMARCAD1-203ENST00000394961 DGKGP49619 791 aa6.55□□□□□ -1.36
SMARCAD1-203ENST00000394961 STK4Q13043 487 aa6.55□□□□□ -1.36
SMARCAD1-203ENST00000394961 KRT39Q6A163 491 aa6.55□□□□□ -1.36
SMARCAD1-203ENST00000394961 CCNI2Q6ZMN8 369 aaPredicted RBP6.55□□□□□ -1.36
SMARCAD1-203ENST00000394961 TTC8Q8TAM2 541 aa6.55□□□□□ -1.36
SMARCAD1-203ENST00000394961 STK32AQ8WU08 396 aa6.55□□□□□ -1.36
SMARCAD1-203ENST00000394961 MRGPRX1Q96LB2 322 aa6.55□□□□□ -1.36
SMARCAD1-203ENST00000394961 FAM81BQ96LP2 452 aa6.55□□□□□ -1.36
SMARCAD1-203ENST00000394961 CDC6Q99741 560 aa6.55□□□□□ -1.36
SMARCAD1-203ENST00000394961 KDM4CQ9H3R0 1056 aa6.55□□□□□ -1.36
SMARCAD1-203ENST00000394961 RETREG1Q9H6L5 497 aa6.55□□□□□ -1.36
SMARCAD1-203ENST00000394961 APOBEC3GQ9HC16 384 aaKnown RBP6.55□□□□□ -1.36
SMARCAD1-203ENST00000394961 CALCOCO1Q9P1Z2 691 aa6.55□□□□□ -1.36
SMARCAD1-203ENST00000394961 PCDHGA1Q9Y5H4 931 aa6.55□□□□□ -1.36
SMARCAD1-203ENST00000394961 TK2O00142 265 aa6.54□□□□□ -1.36
SMARCAD1-203ENST00000394961 KRT37O76014 449 aa6.54□□□□□ -1.36
SMARCAD1-203ENST00000394961 RARGP13631 454 aa6.54□□□□□ -1.36
SMARCAD1-203ENST00000394961 TYRP14679 529 aa6.54□□□□□ -1.36
SMARCAD1-203ENST00000394961 TBXAS1P24557 533 aaPredicted RBP6.54□□□□□ -1.36
SMARCAD1-203ENST00000394961 NOVA1P51513 510 aaKnown RBP6.54□□□□□ -1.36
SMARCAD1-203ENST00000394961 CREB5Q02930 508 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms