RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 SYDE1Q6ZW31 735 aaPredicted RBP12.59□□□□□ -0.39
SIN3A-202ENST00000394947 LRRC49Q8IUZ0 686 aa12.59□□□□□ -0.39
SIN3A-202ENST00000394947 GRIP2Q9C0E4 1043 aa12.59□□□□□ -0.39
SIN3A-202ENST00000394947 CLPBQ9H078 707 aa12.59□□□□□ -0.39
SIN3A-202ENST00000394947 RBM7Q9Y580 266 aaKnown RBP12.59□□□□□ -0.39
SIN3A-202ENST00000394947 SH3D21A4FU49 640 aa12.59□□□□□ -0.39
SIN3A-202ENST00000394947 SCNN1BP51168 640 aa12.59□□□□□ -0.39
SIN3A-202ENST00000394947 PLK1P53350 603 aa12.59□□□□□ -0.39
SIN3A-202ENST00000394947 GNASQ5JWF2 1037 aa12.59□□□□□ -0.39
SIN3A-202ENST00000394947 CYP20A1Q6UW02 462 aa12.59□□□□□ -0.39
SIN3A-202ENST00000394947 ZBTB49Q6ZSB9 765 aa12.59□□□□□ -0.39
SIN3A-202ENST00000394947 CDK20Q8IZL9 346 aa12.59□□□□□ -0.39
SIN3A-202ENST00000394947 ATP6V0D2Q8N8Y2 350 aa12.59□□□□□ -0.39
SIN3A-202ENST00000394947 TP53INP1Q96A56 240 aa12.59□□□□□ -0.39
SIN3A-202ENST00000394947 MTMR12Q9C0I1 747 aa12.59□□□□□ -0.39
SIN3A-202ENST00000394947 LIMD1Q9UGP4 676 aa12.59□□□□□ -0.39
SIN3A-202ENST00000394947 MAFFQ9ULX9 164 aa12.59□□□□□ -0.39
SIN3A-202ENST00000394947 COG5Q9UP83 839 aa12.59□□□□□ -0.39
SIN3A-202ENST00000394947 SNTNA6NMZ2 147 aa12.59□□□□□ -0.39
SIN3A-202ENST00000394947 EFNA5P52803 228 aa12.59□□□□□ -0.39
SIN3A-202ENST00000394947 ACOX1Q15067 660 aa12.59□□□□□ -0.39
SIN3A-202ENST00000394947 TSHZ1Q6ZSZ6 1077 aa12.59□□□□□ -0.39
SIN3A-202ENST00000394947 LPCAT1Q8NF37 534 aa12.59□□□□□ -0.39
SIN3A-202ENST00000394947 FAM220BPB1ANY3 271 aa12.59□□□□□ -0.39
SIN3A-202ENST00000394947 TAL1P17542 331 aaPredicted RBP12.59□□□□□ -0.39
SIN3A-202ENST00000394947 NPEPPSP55786 919 aa12.59□□□□□ -0.39
SIN3A-202ENST00000394947 BRSK2Q8IWQ3 736 aa12.59□□□□□ -0.39
SIN3A-202ENST00000394947 EPB41L4AQ9HCS5 686 aaPredicted RBP12.59□□□□□ -0.39
SIN3A-202ENST00000394947 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.59□□□□□ -0.39
SIN3A-202ENST00000394947 AP4S1Q9Y587 144 aa12.59□□□□□ -0.39
SIN3A-202ENST00000394947 CENPXA8MT69 81 aa12.58□□□□□ -0.4
SIN3A-202ENST00000394947 RBMXL2O75526 392 aaKnown RBP12.58□□□□□ -0.4
SIN3A-202ENST00000394947 GCLCP48506 637 aaPredicted RBP12.58□□□□□ -0.4
SIN3A-202ENST00000394947 NDUFAF6Q330K2 333 aa12.58□□□□□ -0.4
SIN3A-202ENST00000394947 ARMC3Q5W041 872 aa12.58□□□□□ -0.4
SIN3A-202ENST00000394947 NAPEPLDQ6IQ20 393 aa12.58□□□□□ -0.4
SIN3A-202ENST00000394947 DEFB107AQ8IZN7 70 aa12.58□□□□□ -0.4
SIN3A-202ENST00000394947 EDEM1Q92611 657 aa12.58□□□□□ -0.4
SIN3A-202ENST00000394947 ATXN3LQ9H3M9 355 aa12.58□□□□□ -0.4
SIN3A-202ENST00000394947 MRGBPQ9NV56 204 aa12.58□□□□□ -0.4
SIN3A-202ENST00000394947 ZNF518AQ6AHZ1 1483 aa12.58□□□□□ -0.4
SIN3A-202ENST00000394947 BIRC5O15392 142 aa12.58□□□□□ -0.4
SIN3A-202ENST00000394947 GH1P01241 217 aa12.58□□□□□ -0.4
SIN3A-202ENST00000394947 NRF1Q16656 503 aa12.58□□□□□ -0.4
SIN3A-202ENST00000394947 TTLL9Q3SXZ7 439 aa12.58□□□□□ -0.4
SIN3A-202ENST00000394947 SEL1L3Q68CR1 1132 aa12.58□□□□□ -0.4
SIN3A-202ENST00000394947 GPRC5CQ9NQ84 441 aa12.58□□□□□ -0.4
SIN3A-202ENST00000394947 FAM86B1E9PN63 330 aa12.58□□□□□ -0.4
SIN3A-202ENST00000394947 CLPTM1O96005 669 aa12.58□□□□□ -0.4
SIN3A-202ENST00000394947 NQO1P15559 274 aaKnown RBP12.58□□□□□ -0.4
SIN3A-202ENST00000394947 SLC11A2P49281 568 aa12.58□□□□□ -0.4
SIN3A-202ENST00000394947 CCNI2Q6ZMN8 369 aaPredicted RBP12.58□□□□□ -0.4
SIN3A-202ENST00000394947 MARK2Q7KZI7 788 aaKnown RBP12.58□□□□□ -0.4
SIN3A-202ENST00000394947 SIRT2Q8IXJ6 389 aa12.58□□□□□ -0.4
SIN3A-202ENST00000394947 ULK2Q8IYT8 1036 aa12.58□□□□□ -0.4
SIN3A-202ENST00000394947 FAM129BQ96TA1 746 aa12.58□□□□□ -0.4
SIN3A-202ENST00000394947 ELOVL6Q9H5J4 265 aa12.58□□□□□ -0.4
SIN3A-202ENST00000394947 ERAP1Q9NZ08 941 aa12.58□□□□□ -0.4
SIN3A-202ENST00000394947 EPHA7Q15375 998 aa12.58□□□□□ -0.4
SIN3A-202ENST00000394947 CBWD3Q5JTY5 395 aa12.58□□□□□ -0.4
SIN3A-202ENST00000394947 CBWD5Q5RIA9 395 aa12.58□□□□□ -0.4
SIN3A-202ENST00000394947 HLA-DQA1Q5Y7H0 255 aa12.58□□□□□ -0.4
SIN3A-202ENST00000394947 C16orf46Q6P387 395 aa12.58□□□□□ -0.4
SIN3A-202ENST00000394947 POU5F2Q8N7G0 328 aa12.58□□□□□ -0.4
SIN3A-202ENST00000394947 TARS2Q9BW92 718 aaKnown RBP12.58□□□□□ -0.4
SIN3A-202ENST00000394947 NUP160Q12769 1436 aa12.58□□□□□ -0.4
SIN3A-202ENST00000394947 EFCAB10A6NFE3 127 aa12.58□□□□□ -0.4
SIN3A-202ENST00000394947 CD4P01730 458 aa12.58□□□□□ -0.4
SIN3A-202ENST00000394947 PAICSP22234 425 aaKnown RBP12.58□□□□□ -0.4
SIN3A-202ENST00000394947 RASA2Q15283 850 aa12.58□□□□□ -0.4
SIN3A-202ENST00000394947 CLVS1Q8IUQ0 354 aaPredicted RBP12.58□□□□□ -0.4
SIN3A-202ENST00000394947 DCP1BQ8IZD4 617 aaKnown RBP12.58□□□□□ -0.4
SIN3A-202ENST00000394947 ZNF579Q8NAF0 562 aaKnown RBP12.58□□□□□ -0.4
SIN3A-202ENST00000394947 FNDC5Q8NAU1 212 aa12.58□□□□□ -0.4
SIN3A-202ENST00000394947 BBS4Q96RK4 519 aa12.58□□□□□ -0.4
SIN3A-202ENST00000394947 YME1L1Q96TA2 773 aa12.58□□□□□ -0.4
SIN3A-202ENST00000394947 SMPD4Q9NXE4 827 aa12.58□□□□□ -0.4
SIN3A-202ENST00000394947 ALG6Q9Y672 507 aa12.58□□□□□ -0.4
SIN3A-202ENST00000394947 SLC12A8A0AV02 714 aa12.57□□□□□ -0.4
SIN3A-202ENST00000394947 BCL10O95999 233 aa12.57□□□□□ -0.4
SIN3A-202ENST00000394947 AKR1D1P51857 326 aa12.57□□□□□ -0.4
SIN3A-202ENST00000394947 MARSP56192 900 aaKnown RBP12.57□□□□□ -0.4
SIN3A-202ENST00000394947 CYB5D1Q6P9G0 228 aa12.57□□□□□ -0.4
SIN3A-202ENST00000394947 NEK7Q8TDX7 302 aa12.57□□□□□ -0.4
SIN3A-202ENST00000394947 RNF145Q96MT1 663 aa12.57□□□□□ -0.4
SIN3A-202ENST00000394947 KIF2CQ99661 725 aa12.57□□□□□ -0.4
SIN3A-202ENST00000394947 POLE3Q9NRF9 147 aa12.57□□□□□ -0.4
SIN3A-202ENST00000394947 EHD3Q9NZN3 535 aa12.57□□□□□ -0.4
SIN3A-202ENST00000394947 LNPEPQ9UIQ6 1025 aa12.57□□□□□ -0.4
SIN3A-202ENST00000394947 TBX22Q9Y458 520 aa12.57□□□□□ -0.4
SIN3A-202ENST00000394947 VCLP18206 1134 aa12.57□□□□□ -0.4
SIN3A-202ENST00000394947 MSH3P20585 1137 aa12.57□□□□□ -0.4
SIN3A-202ENST00000394947 SERPINB8P50452 374 aa12.57□□□□□ -0.4
SIN3A-202ENST00000394947 SERPINH1P50454 418 aaKnown RBP12.57□□□□□ -0.4
SIN3A-202ENST00000394947 STXBP1P61764 594 aaKnown RBP12.57□□□□□ -0.4
SIN3A-202ENST00000394947 NOA1Q8NC60 698 aaKnown RBP12.57□□□□□ -0.4
SIN3A-202ENST00000394947 CEP44Q9C0F1 390 aa12.57□□□□□ -0.4
SIN3A-202ENST00000394947 ACTR8Q9H981 624 aa12.57□□□□□ -0.4
SIN3A-202ENST00000394947 GPAMQ9HCL2 828 aa12.57□□□□□ -0.4
SIN3A-202ENST00000394947 MCUBQ9NWR8 336 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms