RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 KRT10P13645 584 aa7.26□□□□□ -1.25
RTN4-205ENST00000394609 IL1R2P27930 398 aa7.26□□□□□ -1.25
RTN4-205ENST00000394609 SLC8A1P32418 973 aa7.26□□□□□ -1.25
RTN4-205ENST00000394609 ELF1P32519 619 aa7.26□□□□□ -1.25
RTN4-205ENST00000394609 NDUFV1P49821 464 aa7.26□□□□□ -1.25
RTN4-205ENST00000394609 MAP3K7CLP57077 242 aa7.26□□□□□ -1.25
RTN4-205ENST00000394609 ATP11AP98196 1134 aa7.26□□□□□ -1.25
RTN4-205ENST00000394609 FOXK2Q01167 660 aa7.26□□□□□ -1.25
RTN4-205ENST00000394609 LMNB2Q03252 620 aa7.26□□□□□ -1.25
RTN4-205ENST00000394609 CDO1Q16878 200 aa7.26□□□□□ -1.25
RTN4-205ENST00000394609 C15orf59Q2T9L4 293 aaPredicted RBP7.26□□□□□ -1.25
RTN4-205ENST00000394609 KAZNQ674X7 775 aa7.26□□□□□ -1.25
RTN4-205ENST00000394609 ANKRD33Q7Z3H0 272 aa7.26□□□□□ -1.25
RTN4-205ENST00000394609 PIGZQ86VD9 579 aa7.26□□□□□ -1.25
RTN4-205ENST00000394609 METTL23Q86XA0 190 aa7.26□□□□□ -1.25
RTN4-205ENST00000394609 ABI1Q8IZP0 508 aa7.26□□□□□ -1.25
RTN4-205ENST00000394609 DNAJC5GQ8N7S2 189 aa7.26□□□□□ -1.25
RTN4-205ENST00000394609 URGCPQ8TCY9 931 aa7.26□□□□□ -1.25
RTN4-205ENST00000394609 STK32AQ8WU08 396 aa7.26□□□□□ -1.25
RTN4-205ENST00000394609 C1orf54Q8WWF1 131 aa7.26□□□□□ -1.25
RTN4-205ENST00000394609 RAPGEF5Q92565 580 aa7.26□□□□□ -1.25
RTN4-205ENST00000394609 SEPT8Q92599 483 aa7.26□□□□□ -1.25
RTN4-205ENST00000394609 MAGOHBQ96A72 148 aaKnown RBP7.26□□□□□ -1.25
RTN4-205ENST00000394609 ZNF333Q96JL9 665 aa7.26□□□□□ -1.25
RTN4-205ENST00000394609 CFAP57Q96MR6 1250 aa7.26□□□□□ -1.25
RTN4-205ENST00000394609 TMEM209Q96SK2 561 aa7.26□□□□□ -1.25
RTN4-205ENST00000394609 KCNK16Q96T55 309 aa7.26□□□□□ -1.25
RTN4-205ENST00000394609 FAM118BQ9BPY3 351 aa7.26□□□□□ -1.25
RTN4-205ENST00000394609 DUSP16Q9BY84 665 aa7.26□□□□□ -1.25
RTN4-205ENST00000394609 SEZ6LQ9BYH1 1024 aa7.26□□□□□ -1.25
RTN4-205ENST00000394609 RHOBTB2Q9BYZ6 727 aa7.26□□□□□ -1.25
RTN4-205ENST00000394609 DNAI2Q9GZS0 605 aa7.26□□□□□ -1.25
RTN4-205ENST00000394609 TMPRSS4Q9NRS4 437 aa7.26□□□□□ -1.25
RTN4-205ENST00000394609 KRT82Q9NSB4 513 aa7.26□□□□□ -1.25
RTN4-205ENST00000394609 TMEM161AQ9NX61 479 aa7.26□□□□□ -1.25
RTN4-205ENST00000394609 RALGAPA2Q2PPJ7 1873 aa7.25□□□□□ -1.25
RTN4-205ENST00000394609 LRRD1A4D1F6 860 aa7.25□□□□□ -1.25
RTN4-205ENST00000394609 C2CD4BA6NLJ0 364 aa7.25□□□□□ -1.25
RTN4-205ENST00000394609 CCDC188H7C350 402 aa7.25□□□□□ -1.25
RTN4-205ENST00000394609 INPPL1O15357 1258 aa7.25□□□□□ -1.25
RTN4-205ENST00000394609 FAM107AO95990 144 aa7.25□□□□□ -1.25
RTN4-205ENST00000394609 KRT1P04264 644 aa7.25□□□□□ -1.25
RTN4-205ENST00000394609 FAM163BP0C2L3 166 aa7.25□□□□□ -1.25
RTN4-205ENST00000394609 FAM200BP0CF97 657 aa7.25□□□□□ -1.25
RTN4-205ENST00000394609 NPR3P17342 541 aa7.25□□□□□ -1.25
RTN4-205ENST00000394609 GPD1P21695 349 aa7.25□□□□□ -1.25
RTN4-205ENST00000394609 MIPP30301 263 aa7.25□□□□□ -1.25
RTN4-205ENST00000394609 KCNJ1P48048 391 aa7.25□□□□□ -1.25
RTN4-205ENST00000394609 CARSP49589 748 aaKnown RBP7.25□□□□□ -1.25
RTN4-205ENST00000394609 ZNF143P52747 638 aaPredicted RBP7.25□□□□□ -1.25
RTN4-205ENST00000394609 LBX1P52954 281 aa7.25□□□□□ -1.25
RTN4-205ENST00000394609 CACNA2D1P54289 1103 aa7.25□□□□□ -1.25
RTN4-205ENST00000394609 BCAR1P56945 870 aa7.25□□□□□ -1.25
RTN4-205ENST00000394609 SLC8A3P57103 927 aa7.25□□□□□ -1.25
RTN4-205ENST00000394609 C1QTNF8P60827 252 aa7.25□□□□□ -1.25
RTN4-205ENST00000394609 SLC6A3Q01959 620 aa7.25□□□□□ -1.25
RTN4-205ENST00000394609 SRSF11Q05519 484 aaKnown RBP7.25□□□□□ -1.25
RTN4-205ENST00000394609 ADCY2Q08462 1091 aa7.25□□□□□ -1.25
RTN4-205ENST00000394609 DSC1Q08554 894 aa7.25□□□□□ -1.25
RTN4-205ENST00000394609 ADIGQ0VDE8 80 aa7.25□□□□□ -1.25
RTN4-205ENST00000394609 SNX1Q13596 522 aa7.25□□□□□ -1.25
RTN4-205ENST00000394609 SIX1Q15475 284 aaPredicted RBP7.25□□□□□ -1.25
RTN4-205ENST00000394609 CCDC14Q49A88 953 aa7.25□□□□□ -1.25
RTN4-205ENST00000394609 ODF2Q5BJF6 829 aa7.25□□□□□ -1.25
RTN4-205ENST00000394609 TTC27Q6P3X3 843 aa7.25□□□□□ -1.25
RTN4-205ENST00000394609 C6orf89Q6UWU4 347 aa7.25□□□□□ -1.25
RTN4-205ENST00000394609 MFSD7Q6UXD7 560 aa7.25□□□□□ -1.25
RTN4-205ENST00000394609 CTU1Q7Z7A3 348 aaKnown RBP7.25□□□□□ -1.25
RTN4-205ENST00000394609 DDX42Q86XP3 938 aaKnown RBP eCLIP7.25□□□□□ -1.258e-7■■□□□ 11.5
RTN4-205ENST00000394609 COLGALT2Q8IYK4 626 aa7.25□□□□□ -1.25
RTN4-205ENST00000394609 KATNAL2Q8IYT4 538 aa7.25□□□□□ -1.25
RTN4-205ENST00000394609 NIPA2Q8N8Q9 360 aa7.25□□□□□ -1.25
RTN4-205ENST00000394609 OR10T2Q8NGX3 314 aa7.25□□□□□ -1.25
RTN4-205ENST00000394609 FNIP1Q8TF40 1166 aa7.25□□□□□ -1.25
RTN4-205ENST00000394609 ATG4AQ8WYN0 398 aa7.25□□□□□ -1.25
RTN4-205ENST00000394609 MIEF2Q96C03 454 aa7.25□□□□□ -1.25
RTN4-205ENST00000394609 UROC1Q96N76 676 aa7.25□□□□□ -1.25
RTN4-205ENST00000394609 FAM193BQ96PV7 902 aaPredicted RBP7.25□□□□□ -1.25
RTN4-205ENST00000394609 PLVAPQ9BX97 442 aa7.25□□□□□ -1.25
RTN4-205ENST00000394609 OSBPL8Q9BZF1 889 aa7.25□□□□□ -1.25
RTN4-205ENST00000394609 TRIM31Q9BZY9 425 aa7.25□□□□□ -1.25
RTN4-205ENST00000394609 BATF3Q9NR55 127 aa7.25□□□□□ -1.25
RTN4-205ENST00000394609 ENAMQ9NRM1 1142 aa7.25□□□□□ -1.25
RTN4-205ENST00000394609 KLC4Q9NSK0 619 aa7.25□□□□□ -1.25
RTN4-205ENST00000394609 TMEM30AQ9NV96 361 aa7.25□□□□□ -1.25
RTN4-205ENST00000394609 CDH9Q9ULB4 789 aa7.25□□□□□ -1.25
RTN4-205ENST00000394609 MTUS1Q9ULD2 1270 aa7.25□□□□□ -1.25
RTN4-205ENST00000394609 LRFN2Q9ULH4 789 aa7.25□□□□□ -1.25
RTN4-205ENST00000394609 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.25□□□□□ -1.25
RTN4-205ENST00000394609 CAPN7Q9Y6W3 813 aa7.25□□□□□ -1.25
RTN4-205ENST00000394609 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.24□□□□□ -1.25
RTN4-205ENST00000394609 M0QZQ0 153 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 FSCN2O14926 492 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 XPO1O14980 1071 aaKnown RBP7.24□□□□□ -1.25
RTN4-205ENST00000394609 LILRA1O75019 489 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 PHF2O75151 1096 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 TADA2AO75478 443 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 RNF8O76064 485 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 TFE3P19532 575 aaPredicted RBP7.24□□□□□ -1.25
RTN4-205ENST00000394609 PCSK1P29120 753 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms