RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.44■□□□□ 0.54
SNRPA1-202ENST00000394082 OSER1Q9NX31 292 aa18.44■□□□□ 0.54
SNRPA1-202ENST00000394082 CLIC5Q9NZA1 410 aa18.44■□□□□ 0.54
SNRPA1-202ENST00000394082 DNMT3LQ9UJW3 386 aa18.44■□□□□ 0.54
SNRPA1-202ENST00000394082 USP3Q9Y6I4 520 aa18.44■□□□□ 0.54
SNRPA1-202ENST00000394082 ASPMQ8IZT6 3477 aa18.43■□□□□ 0.54
SNRPA1-202ENST00000394082 MYH10P35580 1976 aa18.43■□□□□ 0.54
SNRPA1-202ENST00000394082 CHD6Q8TD26 2715 aa18.43■□□□□ 0.54
SNRPA1-202ENST00000394082 CILPO75339 1184 aa18.43■□□□□ 0.54
SNRPA1-202ENST00000394082 TBX18O95935 607 aa18.43■□□□□ 0.54
SNRPA1-202ENST00000394082 IRF1P10914 325 aa18.43■□□□□ 0.54
SNRPA1-202ENST00000394082 RPL13P26373 211 aaKnown RBP18.43■□□□□ 0.54
SNRPA1-202ENST00000394082 GTF2H1P32780 548 aa18.43■□□□□ 0.54
SNRPA1-202ENST00000394082 KIF11P52732 1056 aa18.43■□□□□ 0.54
SNRPA1-202ENST00000394082 ZNF132P52740 706 aa18.43■□□□□ 0.54
SNRPA1-202ENST00000394082 ZNF252P-AS1Q0IIN9 211 aa18.43■□□□□ 0.54
SNRPA1-202ENST00000394082 DUOXA1Q1HG43 343 aa18.43■□□□□ 0.54
SNRPA1-202ENST00000394082 SPOPLQ6IQ16 392 aa18.43■□□□□ 0.54
SNRPA1-202ENST00000394082 Q6ZNB5 142 aa18.43■□□□□ 0.54
SNRPA1-202ENST00000394082 GPRIN1Q7Z2K8 1008 aa18.43■□□□□ 0.54
SNRPA1-202ENST00000394082 FRMD1Q8N878 549 aa18.43■□□□□ 0.54
SNRPA1-202ENST00000394082 ELMO3Q96BJ8 720 aa18.43■□□□□ 0.54
SNRPA1-202ENST00000394082 NIF3L1Q9GZT8 377 aa18.43■□□□□ 0.54
SNRPA1-202ENST00000394082 FBXO10Q9UK96 956 aa18.43■□□□□ 0.54
SNRPA1-202ENST00000394082 ZNF510Q9Y2H8 683 aa18.43■□□□□ 0.54
SNRPA1-202ENST00000394082 A0A1B0GVL5 298 aa18.42■□□□□ 0.54
SNRPA1-202ENST00000394082 NEDD8-MDP1E9PL57 170 aa18.42■□□□□ 0.54
SNRPA1-202ENST00000394082 GIPC1O14908 333 aa18.42■□□□□ 0.54
SNRPA1-202ENST00000394082 NPC1O15118 1278 aa18.42■□□□□ 0.54
SNRPA1-202ENST00000394082 CYP26A1O43174 497 aa18.42■□□□□ 0.54
SNRPA1-202ENST00000394082 RARGP13631 454 aa18.42■□□□□ 0.54
SNRPA1-202ENST00000394082 ENGP17813 658 aa18.42■□□□□ 0.54
SNRPA1-202ENST00000394082 ACO1P21399 889 aaKnown RBP18.42■□□□□ 0.54
SNRPA1-202ENST00000394082 NR2F2P24468 414 aa18.42■□□□□ 0.54
SNRPA1-202ENST00000394082 ADORA2BP29275 332 aa18.42■□□□□ 0.54
SNRPA1-202ENST00000394082 ORC1Q13415 861 aa18.42■□□□□ 0.54
SNRPA1-202ENST00000394082 MIB1Q86YT6 1006 aa18.42■□□□□ 0.54
SNRPA1-202ENST00000394082 CHPFQ8IZ52 775 aa18.42■□□□□ 0.54
SNRPA1-202ENST00000394082 GUF1Q8N442 669 aaKnown RBP18.42■□□□□ 0.54
SNRPA1-202ENST00000394082 TAS1R2Q8TE23 839 aa18.42■□□□□ 0.54
SNRPA1-202ENST00000394082 TWNKQ96RR1 684 aa18.42■□□□□ 0.54
SNRPA1-202ENST00000394082 DUSP16Q9BY84 665 aa18.42■□□□□ 0.54
SNRPA1-202ENST00000394082 UBXN6Q9BZV1 441 aa18.42■□□□□ 0.54
SNRPA1-202ENST00000394082 SLC32A1Q9H598 525 aa18.42■□□□□ 0.54
SNRPA1-202ENST00000394082 NMUR1Q9HB89 426 aa18.42■□□□□ 0.54
SNRPA1-202ENST00000394082 APOBEC3GQ9HC16 384 aaKnown RBP18.42■□□□□ 0.54
SNRPA1-202ENST00000394082 ZDHHC4Q9NPG8 344 aa18.42■□□□□ 0.54
SNRPA1-202ENST00000394082 CALCOCO1Q9P1Z2 691 aa18.42■□□□□ 0.54
SNRPA1-202ENST00000394082 CIZ1Q9ULV3 898 aaPredicted RBP18.42■□□□□ 0.54
SNRPA1-202ENST00000394082 SLC6A14Q9UN76 642 aa18.42■□□□□ 0.54
SNRPA1-202ENST00000394082 PI4KAP42356 2102 aa18.41■□□□□ 0.54
SNRPA1-202ENST00000394082 TRIM24O15164 1050 aa18.41■□□□□ 0.54
SNRPA1-202ENST00000394082 SERPINF2P08697 491 aa18.41■□□□□ 0.54
SNRPA1-202ENST00000394082 CISD3P0C7P0 127 aa18.41■□□□□ 0.54
SNRPA1-202ENST00000394082 KRT13P13646 458 aa18.41■□□□□ 0.54
SNRPA1-202ENST00000394082 ITPKAP23677 461 aa18.41■□□□□ 0.54
SNRPA1-202ENST00000394082 PSMC2P35998 433 aaKnown RBP18.41■□□□□ 0.54
SNRPA1-202ENST00000394082 SYKP43405 635 aa18.41■□□□□ 0.54
SNRPA1-202ENST00000394082 DGKGP49619 791 aa18.41■□□□□ 0.54
SNRPA1-202ENST00000394082 RPL6Q02878 288 aaKnown RBP18.41■□□□□ 0.54
SNRPA1-202ENST00000394082 PPP3CAQ08209 521 aa18.41■□□□□ 0.54
SNRPA1-202ENST00000394082 SEMA3BQ13214 749 aa18.41■□□□□ 0.54
SNRPA1-202ENST00000394082 E2F5Q15329 346 aa18.41■□□□□ 0.54
SNRPA1-202ENST00000394082 EGFLAMQ63HQ2 1017 aa18.41■□□□□ 0.54
SNRPA1-202ENST00000394082 METTL3Q86U44 580 aaKnown RBP18.41■□□□□ 0.54
SNRPA1-202ENST00000394082 CCDC150Q8NCX0 1101 aa18.41■□□□□ 0.54
SNRPA1-202ENST00000394082 IPO4Q8TEX9 1081 aaKnown RBP18.41■□□□□ 0.54
SNRPA1-202ENST00000394082 CAPN10Q9HC96 672 aa18.41■□□□□ 0.54
SNRPA1-202ENST00000394082 TMEM8AQ9HCN3 771 aa18.41■□□□□ 0.54
SNRPA1-202ENST00000394082 SLC27A6Q9Y2P4 619 aa18.41■□□□□ 0.54
SNRPA1-202ENST00000394082 ASCC3Q8N3C0 2202 aaKnown RBP18.41■□□□□ 0.54
SNRPA1-202ENST00000394082 ZZEF1O43149 2961 aa18.4■□□□□ 0.54
SNRPA1-202ENST00000394082 IGHV1OR15-9A0A0B4J2B8 117 aa18.4■□□□□ 0.54
SNRPA1-202ENST00000394082 A0A1W2PQH9 124 aa18.4■□□□□ 0.54
SNRPA1-202ENST00000394082 PRRT4C9JH25 899 aa18.4■□□□□ 0.54
SNRPA1-202ENST00000394082 STC2O76061 302 aa18.4■□□□□ 0.54
SNRPA1-202ENST00000394082 RALAP11233 206 aa18.4■□□□□ 0.54
SNRPA1-202ENST00000394082 CHKAP35790 457 aa18.4■□□□□ 0.54
SNRPA1-202ENST00000394082 GCLMP48507 274 aa18.4■□□□□ 0.54
SNRPA1-202ENST00000394082 COG7P83436 770 aa18.4■□□□□ 0.54
SNRPA1-202ENST00000394082 ZNF33AQ06730 810 aa18.4■□□□□ 0.54
SNRPA1-202ENST00000394082 DPYDQ12882 1025 aa18.4■□□□□ 0.54
SNRPA1-202ENST00000394082 ARMCX6Q7L4S7 300 aa18.4■□□□□ 0.54
SNRPA1-202ENST00000394082 PIP4P1Q86T03 277 aa18.4■□□□□ 0.54
SNRPA1-202ENST00000394082 FAM186BQ8IYM0 893 aa18.4■□□□□ 0.54
SNRPA1-202ENST00000394082 KDF1Q8NAX2 398 aaPredicted RBP18.4■□□□□ 0.54
SNRPA1-202ENST00000394082 SPATA32Q96LK8 384 aa18.4■□□□□ 0.54
SNRPA1-202ENST00000394082 DCLK3Q9C098 648 aa18.4■□□□□ 0.54
SNRPA1-202ENST00000394082 A0A1W2PQD8 194 aa18.39■□□□□ 0.53
SNRPA1-202ENST00000394082 TMEM8BA6NDV4 472 aa18.39■□□□□ 0.53
SNRPA1-202ENST00000394082 PENKP01210 267 aaPredicted RBP18.39■□□□□ 0.53
SNRPA1-202ENST00000394082 NDUFV2P19404 249 aa18.39■□□□□ 0.53
SNRPA1-202ENST00000394082 KRT85P78386 507 aa18.39■□□□□ 0.53
SNRPA1-202ENST00000394082 GFPT1Q06210 699 aaPredicted RBP18.39■□□□□ 0.53
SNRPA1-202ENST00000394082 ENPP2Q13822 863 aa18.39■□□□□ 0.53
SNRPA1-202ENST00000394082 EDRF1Q3B7T1 1238 aa18.39■□□□□ 0.53
SNRPA1-202ENST00000394082 ZCWPW2Q504Y3 356 aa18.39■□□□□ 0.53
SNRPA1-202ENST00000394082 C10orf120Q5SQS8 335 aa18.39■□□□□ 0.53
SNRPA1-202ENST00000394082 KRT39Q6A163 491 aa18.39■□□□□ 0.53
SNRPA1-202ENST00000394082 UNQ6494/PRO21346Q6UXR6 183 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms