RNA–Protein interactions for RNA: ENST00000393301.4

CTSC-202, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 598 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-202ENST00000393301 PIK3CAP42336 1068 aa13.02□□□□□ -0.33
CTSC-202ENST00000393301 KIF11P52732 1056 aa13.02□□□□□ -0.33
CTSC-202ENST00000393301 MARSP56192 900 aaKnown RBP13.02□□□□□ -0.33
CTSC-202ENST00000393301 FKBP3Q00688 224 aaKnown RBP13.02□□□□□ -0.33
CTSC-202ENST00000393301 CREB5Q02930 508 aa13.02□□□□□ -0.33
CTSC-202ENST00000393301 PPP3CAQ08209 521 aa13.02□□□□□ -0.33
CTSC-202ENST00000393301 IFRD2Q12894 506 aaPredicted RBP13.02□□□□□ -0.33
CTSC-202ENST00000393301 BYSLQ13895 437 aaKnown RBP13.02□□□□□ -0.33
CTSC-202ENST00000393301 CCDC6Q16204 474 aa13.02□□□□□ -0.33
CTSC-202ENST00000393301 CCDC183Q5T5S1 534 aa13.02□□□□□ -0.33
CTSC-202ENST00000393301 N4BP2L1Q5TBK1 243 aaPredicted RBP13.02□□□□□ -0.33
CTSC-202ENST00000393301 TCEAL6Q6IPX3 200 aa13.02□□□□□ -0.33
CTSC-202ENST00000393301 SPOPLQ6IQ16 392 aa13.02□□□□□ -0.33
CTSC-202ENST00000393301 NUDT18Q6ZVK8 323 aa13.02□□□□□ -0.33
CTSC-202ENST00000393301 GPRIN1Q7Z2K8 1008 aa13.02□□□□□ -0.33
CTSC-202ENST00000393301 TMEM25Q86YD3 366 aa13.02□□□□□ -0.33
CTSC-202ENST00000393301 CCDC33Q8N5R6 958 aa13.02□□□□□ -0.33
CTSC-202ENST00000393301 C12orf29Q8N999 325 aa13.02□□□□□ -0.33
CTSC-202ENST00000393301 TTC16Q8NEE8 873 aa13.02□□□□□ -0.33
CTSC-202ENST00000393301 TAS1R2Q8TE23 839 aa13.02□□□□□ -0.33
CTSC-202ENST00000393301 TCEAL3Q969E4 200 aa13.02□□□□□ -0.33
CTSC-202ENST00000393301 SPACA7Q96KW9 195 aa13.02□□□□□ -0.33
CTSC-202ENST00000393301 CEP63Q96MT8 703 aa13.02□□□□□ -0.33
CTSC-202ENST00000393301 TPSD1Q9BZJ3 242 aa13.02□□□□□ -0.33
CTSC-202ENST00000393301 UBXN6Q9BZV1 441 aa13.02□□□□□ -0.33
CTSC-202ENST00000393301 IMPG2Q9BZV3 1241 aa13.02□□□□□ -0.33
CTSC-202ENST00000393301 SMOC1Q9H4F8 434 aa13.02□□□□□ -0.33
CTSC-202ENST00000393301 TMEM8AQ9HCN3 771 aa13.02□□□□□ -0.33
CTSC-202ENST00000393301 OSER1Q9NX31 292 aa13.02□□□□□ -0.33
CTSC-202ENST00000393301 CLIC5Q9NZA1 410 aa13.02□□□□□ -0.33
CTSC-202ENST00000393301 DEC1Q9P2X7 70 aa13.02□□□□□ -0.33
CTSC-202ENST00000393301 UPK3BL1B0FP48 263 aa13.01□□□□□ -0.33
CTSC-202ENST00000393301 UPK3BL2E5RIL1 263 aa13.01□□□□□ -0.33
CTSC-202ENST00000393301 GFRA2O00451 464 aa13.01□□□□□ -0.33
CTSC-202ENST00000393301 CDX4O14627 284 aaPredicted RBP13.01□□□□□ -0.33
CTSC-202ENST00000393301 C7P10643 843 aa13.01□□□□□ -0.33
CTSC-202ENST00000393301 TIE1P35590 1138 aa13.01□□□□□ -0.33
CTSC-202ENST00000393301 PSMC2P35998 433 aaKnown RBP13.01□□□□□ -0.33
CTSC-202ENST00000393301 ATP5C1P36542 298 aaKnown RBP13.01□□□□□ -0.33
CTSC-202ENST00000393301 MAP3K7CLP57077 242 aa13.01□□□□□ -0.33
CTSC-202ENST00000393301 BTBD8Q5XKL5 378 aa13.01□□□□□ -0.33
CTSC-202ENST00000393301 CEP135Q66GS9 1140 aa13.01□□□□□ -0.33
CTSC-202ENST00000393301 TTI2Q6NXR4 508 aa13.01□□□□□ -0.33
CTSC-202ENST00000393301 CYP2U1Q7Z449 544 aa13.01□□□□□ -0.33
CTSC-202ENST00000393301 FAM186BQ8IYM0 893 aa13.01□□□□□ -0.33
CTSC-202ENST00000393301 ZNF513Q8N8E2 541 aaPredicted RBP13.01□□□□□ -0.33
CTSC-202ENST00000393301 CYFIP2Q96F07 1278 aa13.01□□□□□ -0.33
CTSC-202ENST00000393301 CDK5RAP1Q96SZ6 601 aaKnown RBP13.01□□□□□ -0.33
CTSC-202ENST00000393301 GABRG3Q99928 467 aa13.01□□□□□ -0.33
CTSC-202ENST00000393301 DUSP16Q9BY84 665 aa13.01□□□□□ -0.33
CTSC-202ENST00000393301 NMUR1Q9HB89 426 aa13.01□□□□□ -0.33
CTSC-202ENST00000393301 FAM49BQ9NUQ9 324 aa13.01□□□□□ -0.33
CTSC-202ENST00000393301 WDR35Q9P2L0 1181 aa13.01□□□□□ -0.33
CTSC-202ENST00000393301 DACH1Q9UI36 760 aa13.01□□□□□ -0.33
CTSC-202ENST00000393301 MBD1Q9UIS9 605 aaPredicted RBP13.01□□□□□ -0.33
CTSC-202ENST00000393301 ANGPTL2Q9UKU9 493 aa13.01□□□□□ -0.33
CTSC-202ENST00000393301 WASF3Q9UPY6 502 aa13.01□□□□□ -0.33
CTSC-202ENST00000393301 A0A1W2PQF6 199 aa13□□□□□ -0.33
CTSC-202ENST00000393301 KHNYNO15037 678 aaKnown RBP13□□□□□ -0.33
CTSC-202ENST00000393301 GNA14O95837 355 aa13□□□□□ -0.33
CTSC-202ENST00000393301 TBX18O95935 607 aa13□□□□□ -0.33
CTSC-202ENST00000393301 PENKP01210 267 aaPredicted RBP13□□□□□ -0.33
CTSC-202ENST00000393301 CISD3P0C7P0 127 aa13□□□□□ -0.33
CTSC-202ENST00000393301 NTSR1P30989 418 aa13□□□□□ -0.33
CTSC-202ENST00000393301 GBP1P32455 592 aa13□□□□□ -0.33
CTSC-202ENST00000393301 PLA2G4AP47712 749 aa13□□□□□ -0.33
CTSC-202ENST00000393301 KDSRQ06136 332 aa13□□□□□ -0.33
CTSC-202ENST00000393301 GOLGA8FQ08AF8 430 aa13□□□□□ -0.33
CTSC-202ENST00000393301 GOLGA8DPQ0D2H9 430 aa13□□□□□ -0.33
CTSC-202ENST00000393301 RAB41Q5JT25 222 aa13□□□□□ -0.33
CTSC-202ENST00000393301 EMC10Q5UCC4 262 aa13□□□□□ -0.33
CTSC-202ENST00000393301 DAB2IPQ5VWQ8 1189 aa13□□□□□ -0.33
CTSC-202ENST00000393301 ARHGAP17Q68EM7 881 aa13□□□□□ -0.33
CTSC-202ENST00000393301 KRT39Q6A163 491 aa13□□□□□ -0.33
CTSC-202ENST00000393301 SLC23A3Q6PIS1 610 aa13□□□□□ -0.33
CTSC-202ENST00000393301 LPCAT2Q7L5N7 544 aa13□□□□□ -0.33
CTSC-202ENST00000393301 SYT12Q8IV01 421 aa13□□□□□ -0.33
CTSC-202ENST00000393301 ELMO3Q96BJ8 720 aa13□□□□□ -0.33
CTSC-202ENST00000393301 XPO6Q96QU8 1125 aaKnown RBP13□□□□□ -0.33
CTSC-202ENST00000393301 TSG101Q99816 390 aa13□□□□□ -0.33
CTSC-202ENST00000393301 DNAI2Q9GZS0 605 aa13□□□□□ -0.33
CTSC-202ENST00000393301 TMEM9BQ9NQ34 198 aa13□□□□□ -0.33
CTSC-202ENST00000393301 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13□□□□□ -0.332e-6■■■■■ 149.1
CTSC-202ENST00000393301 RWDD2AQ9UIY3 292 aa13□□□□□ -0.33
CTSC-202ENST00000393301 DNMT3LQ9UJW3 386 aa13□□□□□ -0.33
CTSC-202ENST00000393301 LSM7Q9UK45 103 aaKnown RBP13□□□□□ -0.33
CTSC-202ENST00000393301 ZNF510Q9Y2H8 683 aa13□□□□□ -0.33
CTSC-202ENST00000393301 SLC27A6Q9Y2P4 619 aa13□□□□□ -0.33
CTSC-202ENST00000393301 COQ4Q9Y3A0 265 aa13□□□□□ -0.33
CTSC-202ENST00000393301 AKAP13Q12802 2813 aa13□□□□□ -0.33
CTSC-202ENST00000393301 WDFY3Q8IZQ1 3526 aa12.99□□□□□ -0.33
CTSC-202ENST00000393301 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.99□□□□□ -0.33
CTSC-202ENST00000393301 TBC1D3BA6NDS4 549 aa12.99□□□□□ -0.33
CTSC-202ENST00000393301 SCAMP3O14828 347 aaKnown RBP12.99□□□□□ -0.33
CTSC-202ENST00000393301 NPC1O15118 1278 aa12.99□□□□□ -0.33
CTSC-202ENST00000393301 CYP26A1O43174 497 aa12.99□□□□□ -0.33
CTSC-202ENST00000393301 TRIM49P0CI25 452 aa12.99□□□□□ -0.33
CTSC-202ENST00000393301 TRIM49CP0CI26 452 aa12.99□□□□□ -0.33
CTSC-202ENST00000393301 KRT13P13646 458 aa12.99□□□□□ -0.33
CTSC-202ENST00000393301 TYRP14679 529 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms