RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 YWHAZP63104 245 aaKnown RBP14.85□□□□□ -0.03
MKS1-203ENST00000393120 SLC45A4Q5BKX6 768 aa14.85□□□□□ -0.03
MKS1-203ENST00000393120 PPP6R3Q5H9R7 873 aaPredicted RBP14.85□□□□□ -0.03
MKS1-203ENST00000393120 GNASQ5JWF2 1037 aa14.85□□□□□ -0.03
MKS1-203ENST00000393120 WSCD1Q658N2 575 aa14.85□□□□□ -0.03
MKS1-203ENST00000393120 RGS9BPQ6ZS82 235 aa14.85□□□□□ -0.03
MKS1-203ENST00000393120 PAQR9Q6ZVX9 377 aa14.85□□□□□ -0.03
MKS1-203ENST00000393120 MCUQ8NE86 351 aa14.85□□□□□ -0.03
MKS1-203ENST00000393120 FBF1Q8TES7 1133 aa14.85□□□□□ -0.03
MKS1-203ENST00000393120 CSPG4P5Q96PW8 444 aa14.85□□□□□ -0.03
MKS1-203ENST00000393120 CYTH2Q99418 400 aa14.85□□□□□ -0.03
MKS1-203ENST00000393120 KLC2Q9H0B6 622 aa14.85□□□□□ -0.03
MKS1-203ENST00000393120 DHX35Q9H5Z1 703 aaKnown RBP14.85□□□□□ -0.03
MKS1-203ENST00000393120 PNPLA8Q9NP80 782 aa14.85□□□□□ -0.03
MKS1-203ENST00000393120 RAB6BQ9NRW1 208 aa14.85□□□□□ -0.03
MKS1-203ENST00000393120 FAM105AQ9NUU6 356 aa14.85□□□□□ -0.03
MKS1-203ENST00000393120 TYROBPO43914 113 aa14.84□□□□□ -0.03
MKS1-203ENST00000393120 NOS2P35228 1153 aa14.84□□□□□ -0.03
MKS1-203ENST00000393120 ELK3P41970 407 aa14.84□□□□□ -0.03
MKS1-203ENST00000393120 LHX1P48742 406 aa14.84□□□□□ -0.03
MKS1-203ENST00000393120 NRLP54845 237 aa14.84□□□□□ -0.03
MKS1-203ENST00000393120 WDR4P57081 412 aaKnown RBP14.84□□□□□ -0.03
MKS1-203ENST00000393120 NBPF20Q3BBV1 942 aa14.84□□□□□ -0.03
MKS1-203ENST00000393120 SERINC5Q86VE9 423 aa14.84□□□□□ -0.03
MKS1-203ENST00000393120 MICALL1Q8N3F8 863 aa14.84□□□□□ -0.03
MKS1-203ENST00000393120 GRAMD1AQ96CP6 724 aa14.84□□□□□ -0.03
MKS1-203ENST00000393120 ZFP42Q96MM3 310 aa14.84□□□□□ -0.03
MKS1-203ENST00000393120 KCTD15Q96SI1 283 aaPredicted RBP14.84□□□□□ -0.03
MKS1-203ENST00000393120 PLCD4Q9BRC7 762 aa14.84□□□□□ -0.03
MKS1-203ENST00000393120 SENP6Q9GZR1 1112 aaPredicted RBP14.84□□□□□ -0.03
MKS1-203ENST00000393120 FZD10Q9ULW2 581 aa14.84□□□□□ -0.03
MKS1-203ENST00000393120 GIT1Q9Y2X7 761 aa14.84□□□□□ -0.03
MKS1-203ENST00000393120 USP15Q9Y4E8 981 aaPredicted RBP14.84□□□□□ -0.03
MKS1-203ENST00000393120 USP3Q9Y6I4 520 aa14.84□□□□□ -0.03
MKS1-203ENST00000393120 ATP2C2O75185 946 aa14.84□□□□□ -0.03
MKS1-203ENST00000393120 FBXO21O94952 628 aa14.84□□□□□ -0.03
MKS1-203ENST00000393120 THP07101 528 aa14.84□□□□□ -0.03
MKS1-203ENST00000393120 RPL9P32969 192 aaKnown RBP14.84□□□□□ -0.03
MKS1-203ENST00000393120 ADIGQ0VDE8 80 aa14.84□□□□□ -0.03
MKS1-203ENST00000393120 CRHR2Q13324 411 aa14.84□□□□□ -0.03
MKS1-203ENST00000393120 MFSD14CQ5VZR4 134 aa14.84□□□□□ -0.03
MKS1-203ENST00000393120 CAPN12Q6ZSI9 719 aa14.84□□□□□ -0.03
MKS1-203ENST00000393120 BZW1Q7L1Q6 419 aaKnown RBP14.84□□□□□ -0.03
MKS1-203ENST00000393120 MRPL10Q7Z7H8 261 aaKnown RBP14.84□□□□□ -0.03
MKS1-203ENST00000393120 IGDCC3Q8IVU1 814 aa14.84□□□□□ -0.03
MKS1-203ENST00000393120 DEFB106AQ8N104 65 aa14.84□□□□□ -0.03
MKS1-203ENST00000393120 TAB3Q8N5C8 712 aaPredicted RBP14.84□□□□□ -0.03
MKS1-203ENST00000393120 CCDC185Q8N715 623 aa14.84□□□□□ -0.03
MKS1-203ENST00000393120 LRRC39Q96DD0 335 aa14.84□□□□□ -0.03
MKS1-203ENST00000393120 SENP8Q96LD8 212 aa14.84□□□□□ -0.03
MKS1-203ENST00000393120 QKIQ96PU8 341 aaKnown RBP eCLIP14.84□□□□□ -0.03
MKS1-203ENST00000393120 SLC2A13Q96QE2 648 aa14.84□□□□□ -0.03
MKS1-203ENST00000393120 TGS1Q96RS0 853 aaKnown RBP14.84□□□□□ -0.03
MKS1-203ENST00000393120 NPY6RQ99463 290 aa14.84□□□□□ -0.03
MKS1-203ENST00000393120 PAFAH2Q99487 392 aa14.84□□□□□ -0.03
MKS1-203ENST00000393120 ETNK2Q9NVF9 386 aa14.84□□□□□ -0.03
MKS1-203ENST00000393120 FGFR1OP2Q9NVK5 253 aa14.84□□□□□ -0.03
MKS1-203ENST00000393120 HACD1B0YJ81 288 aa14.83□□□□□ -0.04
MKS1-203ENST00000393120 CHRNA1P02708 482 aa14.83□□□□□ -0.04
MKS1-203ENST00000393120 GSTA2P09210 222 aa14.83□□□□□ -0.04
MKS1-203ENST00000393120 TAC1P20366 129 aa14.83□□□□□ -0.04
MKS1-203ENST00000393120 CTGFP29279 349 aa14.83□□□□□ -0.04
MKS1-203ENST00000393120 MSH2P43246 934 aa14.83□□□□□ -0.04
MKS1-203ENST00000393120 ATXN1P54253 815 aaKnown RBP14.83□□□□□ -0.04
MKS1-203ENST00000393120 SREBF2Q12772 1141 aa14.83□□□□□ -0.04
MKS1-203ENST00000393120 SLC10A2Q12908 348 aaPredicted RBP14.83□□□□□ -0.04
MKS1-203ENST00000393120 SPARCL1Q14515 664 aa14.83□□□□□ -0.04
MKS1-203ENST00000393120 NUGGCQ68CJ6 796 aa14.83□□□□□ -0.04
MKS1-203ENST00000393120 GDF6Q6KF10 455 aaPredicted RBP14.83□□□□□ -0.04
MKS1-203ENST00000393120 CLEC20AQ6ZU45 233 aa14.83□□□□□ -0.04
MKS1-203ENST00000393120 GDAP1Q8TB36 358 aa14.83□□□□□ -0.04
MKS1-203ENST00000393120 MZB1Q8WU39 189 aa14.83□□□□□ -0.04
MKS1-203ENST00000393120 DCAKDQ8WVC6 231 aa14.83□□□□□ -0.04
MKS1-203ENST00000393120 ALKBH8Q96BT7 664 aaKnown RBP14.83□□□□□ -0.04
MKS1-203ENST00000393120 SPC25Q9HBM1 224 aa14.83□□□□□ -0.04
MKS1-203ENST00000393120 LRRC4Q9HBW1 653 aa14.83□□□□□ -0.04
MKS1-203ENST00000393120 STAP1Q9ULZ2 295 aa14.83□□□□□ -0.04
MKS1-203ENST00000393120 TRIP12Q14669 1992 aaPredicted RBP14.82□□□□□ -0.04
MKS1-203ENST00000393120 TRDMT1O14717 391 aaKnown RBP14.82□□□□□ -0.04
MKS1-203ENST00000393120 GPR182O15218 404 aa14.82□□□□□ -0.04
MKS1-203ENST00000393120 DGKIO75912 1065 aa14.82□□□□□ -0.04
MKS1-203ENST00000393120 SUN1O94901 812 aa14.82□□□□□ -0.04
MKS1-203ENST00000393120 TPSB2P20231 275 aa14.82□□□□□ -0.04
MKS1-203ENST00000393120 ARL4AP40617 200 aa14.82□□□□□ -0.04
MKS1-203ENST00000393120 GBE1Q04446 702 aa14.82□□□□□ -0.04
MKS1-203ENST00000393120 MGAT3Q09327 533 aa14.82□□□□□ -0.04
MKS1-203ENST00000393120 TPSAB1Q15661 275 aa14.82□□□□□ -0.04
MKS1-203ENST00000393120 CXCL17Q6UXB2 119 aa14.82□□□□□ -0.04
MKS1-203ENST00000393120 OLFM3Q96PB7 478 aa14.82□□□□□ -0.04
MKS1-203ENST00000393120 SLC9A7Q96T83 725 aa14.82□□□□□ -0.04
MKS1-203ENST00000393120 ETNK1Q9HBU6 452 aa14.82□□□□□ -0.04
MKS1-203ENST00000393120 MLXIPLQ9NP71 852 aa14.82□□□□□ -0.04
MKS1-203ENST00000393120 NMRK2Q9NPI5 230 aa14.82□□□□□ -0.04
MKS1-203ENST00000393120 CRTAC1Q9NQ79 661 aa14.82□□□□□ -0.04
MKS1-203ENST00000393120 CHMP2BQ9UQN3 213 aa14.82□□□□□ -0.04
MKS1-203ENST00000393120 CAPN7Q9Y6W3 813 aa14.82□□□□□ -0.04
MKS1-203ENST00000393120 SF3B1O75533 1304 aaKnown RBP eCLIP14.82□□□□□ -0.048e-6■■■■■ 107
MKS1-203ENST00000393120 A0A1W2PPM1 405 aa14.82□□□□□ -0.04
MKS1-203ENST00000393120 TCRBV9S1A1TA0A576 114 aa14.82□□□□□ -0.04
MKS1-203ENST00000393120 FAM155AB1AL88 458 aaPredicted RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms