RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 ARL13BQ3SXY8 428 aa10.91□□□□□ -0.66
CALD1-203ENST00000393118 FBXO47Q5MNV8 452 aa10.91□□□□□ -0.66
CALD1-203ENST00000393118 RNF220Q5VTB9 566 aa10.91□□□□□ -0.66
CALD1-203ENST00000393118 GRAMD4Q6IC98 578 aa10.91□□□□□ -0.66
CALD1-203ENST00000393118 TRABD2AQ86V40 505 aa10.91□□□□□ -0.66
CALD1-203ENST00000393118 WDR75Q8IWA0 830 aaKnown RBP10.91□□□□□ -0.66
CALD1-203ENST00000393118 SCN4BQ8IWT1 228 aa10.91□□□□□ -0.66
CALD1-203ENST00000393118 TTC1Q99614 292 aa10.91□□□□□ -0.66
CALD1-203ENST00000393118 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.91□□□□□ -0.662e-6■■■□□ 14.8
CALD1-203ENST00000393118 UBQLN1Q9UMX0 589 aaKnown RBP10.91□□□□□ -0.66
CALD1-203ENST00000393118 COL2A1P02458 1487 aaPredicted RBP10.91□□□□□ -0.66
CALD1-203ENST00000393118 CETPP11597 493 aa10.91□□□□□ -0.66
CALD1-203ENST00000393118 IL1R2P27930 398 aa10.91□□□□□ -0.66
CALD1-203ENST00000393118 TAF6P49848 677 aa10.91□□□□□ -0.66
CALD1-203ENST00000393118 ZNF143P52747 638 aaPredicted RBP10.91□□□□□ -0.66
CALD1-203ENST00000393118 CRADDP78560 199 aa10.91□□□□□ -0.66
CALD1-203ENST00000393118 CACNB2Q08289 660 aaPredicted RBP10.91□□□□□ -0.66
CALD1-203ENST00000393118 CHI3L2Q15782 390 aa10.91□□□□□ -0.66
CALD1-203ENST00000393118 TAF1BQ53T94 588 aaPredicted RBP10.91□□□□□ -0.66
CALD1-203ENST00000393118 RSPH3Q86UC2 560 aa10.91□□□□□ -0.66
CALD1-203ENST00000393118 XYLT1Q86Y38 959 aa10.91□□□□□ -0.66
CALD1-203ENST00000393118 PPP1R36Q96LQ0 422 aa10.91□□□□□ -0.66
CALD1-203ENST00000393118 FAM161BQ96MY7 647 aa10.91□□□□□ -0.66
CALD1-203ENST00000393118 APOL2Q9BQE5 337 aa10.91□□□□□ -0.66
CALD1-203ENST00000393118 RBPJLQ9UBG7 517 aa10.91□□□□□ -0.66
CALD1-203ENST00000393118 KIAA1257Q9ULG3 409 aa10.91□□□□□ -0.66
CALD1-203ENST00000393118 EDN1P05305 212 aa10.9□□□□□ -0.66
CALD1-203ENST00000393118 GHRP10912 638 aa10.9□□□□□ -0.66
CALD1-203ENST00000393118 ASPAP45381 313 aa10.9□□□□□ -0.66
CALD1-203ENST00000393118 TPI1P60174 286 aa10.9□□□□□ -0.66
CALD1-203ENST00000393118 SIX1Q15475 284 aaPredicted RBP10.9□□□□□ -0.66
CALD1-203ENST00000393118 SCARA3Q6AZY7 606 aa10.9□□□□□ -0.66
CALD1-203ENST00000393118 SLC4A11Q8NBS3 891 aa10.9□□□□□ -0.66
CALD1-203ENST00000393118 ZNF75CPQ92670 426 aaPredicted RBP10.9□□□□□ -0.66
CALD1-203ENST00000393118 C18orf25Q96B23 403 aaPredicted RBP10.9□□□□□ -0.66
CALD1-203ENST00000393118 EPAS1Q99814 870 aa10.9□□□□□ -0.66
CALD1-203ENST00000393118 BFARQ9NZS9 450 aa10.9□□□□□ -0.66
CALD1-203ENST00000393118 ZNF112Q9UJU3 913 aa10.9□□□□□ -0.66
CALD1-203ENST00000393118 CD4P01730 458 aa10.9□□□□□ -0.66
CALD1-203ENST00000393118 MBTD1Q05BQ5 628 aa10.9□□□□□ -0.66
CALD1-203ENST00000393118 PTP4A2Q12974 167 aa10.9□□□□□ -0.66
CALD1-203ENST00000393118 PDK2Q15119 407 aa10.9□□□□□ -0.66
CALD1-203ENST00000393118 LRRC36Q1X8D7 754 aa10.9□□□□□ -0.66
CALD1-203ENST00000393118 FNBP1LQ5T0N5 605 aa10.9□□□□□ -0.66
CALD1-203ENST00000393118 TTC39BQ5VTQ0 682 aaPredicted RBP10.9□□□□□ -0.66
CALD1-203ENST00000393118 CCT6BQ92526 530 aa10.9□□□□□ -0.66
CALD1-203ENST00000393118 MRPL45Q9BRJ2 306 aaKnown RBP10.9□□□□□ -0.66
CALD1-203ENST00000393118 SNRNP25Q9BV90 132 aaKnown RBP10.9□□□□□ -0.66
CALD1-203ENST00000393118 MYLK2Q9H1R3 596 aa10.9□□□□□ -0.66
CALD1-203ENST00000393118 TLK1Q9UKI8 766 aa10.9□□□□□ -0.66
CALD1-203ENST00000393118 WNK3Q9BYP7 1800 aa10.9□□□□□ -0.66
CALD1-203ENST00000393118 KCNK1O00180 336 aa10.9□□□□□ -0.66
CALD1-203ENST00000393118 ALOX15BO15296 676 aa10.9□□□□□ -0.66
CALD1-203ENST00000393118 PIGRP01833 764 aa10.9□□□□□ -0.66
CALD1-203ENST00000393118 NCAM1P13591 858 aa10.9□□□□□ -0.66
CALD1-203ENST00000393118 ADIGQ0VDE8 80 aa10.9□□□□□ -0.66
CALD1-203ENST00000393118 XRCC4Q13426 336 aa10.9□□□□□ -0.66
CALD1-203ENST00000393118 MTFR1Q15390 333 aa10.9□□□□□ -0.66
CALD1-203ENST00000393118 DCAF4L1Q3SXM0 396 aa10.9□□□□□ -0.66
CALD1-203ENST00000393118 SLC44A4Q53GD3 710 aa10.9□□□□□ -0.66
CALD1-203ENST00000393118 PPP1R15BQ5SWA1 713 aa10.9□□□□□ -0.66
CALD1-203ENST00000393118 KCNT2Q6UVM3 1135 aa10.9□□□□□ -0.66
CALD1-203ENST00000393118 CES3Q6UWW8 571 aa10.9□□□□□ -0.66
CALD1-203ENST00000393118 VSTM1Q6UX27 236 aa10.9□□□□□ -0.66
CALD1-203ENST00000393118 POLNQ7Z5Q5 900 aa10.9□□□□□ -0.66
CALD1-203ENST00000393118 RASSF3Q86WH2 238 aa10.9□□□□□ -0.66
CALD1-203ENST00000393118 METTL23Q86XA0 190 aa10.9□□□□□ -0.66
CALD1-203ENST00000393118 CPT1BQ92523 772 aa10.9□□□□□ -0.66
CALD1-203ENST00000393118 ZMAT2Q96NC0 199 aaKnown RBP10.9□□□□□ -0.66
CALD1-203ENST00000393118 LPIN3Q9BQK8 851 aa10.9□□□□□ -0.66
CALD1-203ENST00000393118 PPCSQ9HAB8 311 aa10.9□□□□□ -0.66
CALD1-203ENST00000393118 GOLGA2P5Q9HBQ8 144 aa10.9□□□□□ -0.66
CALD1-203ENST00000393118 AAASQ9NRG9 546 aa10.9□□□□□ -0.66
CALD1-203ENST00000393118 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.9□□□□□ -0.66
CALD1-203ENST00000393118 EEF2KO00418 725 aaKnown RBP10.89□□□□□ -0.67
CALD1-203ENST00000393118 GSTA1P08263 222 aa10.89□□□□□ -0.67
CALD1-203ENST00000393118 CACNA2D1P54289 1103 aa10.89□□□□□ -0.67
CALD1-203ENST00000393118 EPHB1P54762 984 aa10.89□□□□□ -0.67
CALD1-203ENST00000393118 SLC6A3Q01959 620 aa10.89□□□□□ -0.67
CALD1-203ENST00000393118 PRPSAP1Q14558 356 aa10.89□□□□□ -0.67
CALD1-203ENST00000393118 SLC10A6Q3KNW5 377 aa10.89□□□□□ -0.67
CALD1-203ENST00000393118 C15orf39Q6ZRI6 1047 aa10.89□□□□□ -0.67
CALD1-203ENST00000393118 PIP4K2CQ8TBX8 421 aa10.89□□□□□ -0.67
CALD1-203ENST00000393118 TFB1MQ8WVM0 346 aaKnown RBP10.89□□□□□ -0.67
CALD1-203ENST00000393118 TMEM109Q9BVC6 243 aa10.89□□□□□ -0.67
CALD1-203ENST00000393118 SHCBP1LQ9BZQ2 653 aa10.89□□□□□ -0.67
CALD1-203ENST00000393118 NACA2Q9H009 215 aa10.89□□□□□ -0.67
CALD1-203ENST00000393118 CYP4F11Q9HBI6 524 aa10.89□□□□□ -0.67
CALD1-203ENST00000393118 GALNT8Q9NY28 637 aa10.89□□□□□ -0.67
CALD1-203ENST00000393118 GGA2Q9UJY4 613 aa10.89□□□□□ -0.67
CALD1-203ENST00000393118 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.89□□□□□ -0.67
CALD1-203ENST00000393118 CILPO75339 1184 aa10.89□□□□□ -0.67
CALD1-203ENST00000393118 BCAT1P54687 386 aa10.89□□□□□ -0.67
CALD1-203ENST00000393118 MAP3K7CLP57077 242 aa10.89□□□□□ -0.67
CALD1-203ENST00000393118 TAF1CQ15572 869 aaPredicted RBP10.89□□□□□ -0.67
CALD1-203ENST00000393118 SLC1A5Q15758 541 aa10.89□□□□□ -0.67
CALD1-203ENST00000393118 SLC27A1Q6PCB7 646 aa10.89□□□□□ -0.67
CALD1-203ENST00000393118 SLC26A11Q86WA9 606 aa10.89□□□□□ -0.67
CALD1-203ENST00000393118 ADGRF2Q8IZF7 708 aa10.89□□□□□ -0.67
CALD1-203ENST00000393118 DCLK2Q8N568 766 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms