RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 A0A1W2PPM1 405 aa26.59■■□□□ 1.85
SMARCD3-203ENST00000392811 SNX3O60493 162 aa26.59■■□□□ 1.85
SMARCD3-203ENST00000392811 MLH1P40692 756 aa26.59■■□□□ 1.85
SMARCD3-203ENST00000392811 KLHL38Q2WGJ6 581 aa26.59■■□□□ 1.85
SMARCD3-203ENST00000392811 GDF6Q6KF10 455 aaPredicted RBP26.59■■□□□ 1.85
SMARCD3-203ENST00000392811 C4orf33Q8N1A6 199 aa26.59■■□□□ 1.85
SMARCD3-203ENST00000392811 GSTCDQ8NEC7 633 aa26.59■■□□□ 1.85
SMARCD3-203ENST00000392811 CSPG4P5Q96PW8 444 aa26.59■■□□□ 1.85
SMARCD3-203ENST00000392811 SMC6Q96SB8 1091 aa26.59■■□□□ 1.85
SMARCD3-203ENST00000392811 PAFAH2Q99487 392 aa26.59■■□□□ 1.85
SMARCD3-203ENST00000392811 TSPYL2Q9H2G4 693 aaPredicted RBP26.59■■□□□ 1.85
SMARCD3-203ENST00000392811 FAM105AQ9NUU6 356 aa26.59■■□□□ 1.85
SMARCD3-203ENST00000392811 GABRDO14764 452 aa26.58■■□□□ 1.85
SMARCD3-203ENST00000392811 OAS1P00973 400 aaKnown RBP26.58■■□□□ 1.85
SMARCD3-203ENST00000392811 CTSHP09668 335 aa26.58■■□□□ 1.85
SMARCD3-203ENST00000392811 NPR3P17342 541 aa26.58■■□□□ 1.85
SMARCD3-203ENST00000392811 SLC8A3P57103 927 aa26.58■■□□□ 1.85
SMARCD3-203ENST00000392811 GJA9P57773 515 aa26.58■■□□□ 1.85
SMARCD3-203ENST00000392811 ACTN3Q08043 901 aaPredicted RBP26.58■■□□□ 1.85
SMARCD3-203ENST00000392811 SLC10A2Q12908 348 aaPredicted RBP26.58■■□□□ 1.85
SMARCD3-203ENST00000392811 FAXCQ5TGI0 409 aa26.58■■□□□ 1.85
SMARCD3-203ENST00000392811 KIAA0319Q5VV43 1072 aa26.58■■□□□ 1.85
SMARCD3-203ENST00000392811 CDKL3Q8IVW4 592 aaPredicted RBP26.58■■□□□ 1.85
SMARCD3-203ENST00000392811 DENND1AQ8TEH3 1009 aa26.58■■□□□ 1.85
SMARCD3-203ENST00000392811 FAM149B1Q96BN6 582 aa26.58■■□□□ 1.85
SMARCD3-203ENST00000392811 TEX264Q9Y6I9 313 aa26.58■■□□□ 1.85
SMARCD3-203ENST00000392811 CCT8L1PA6NM43 557 aa26.58■■□□□ 1.85
SMARCD3-203ENST00000392811 CAPN15O75808 1086 aa26.58■■□□□ 1.85
SMARCD3-203ENST00000392811 PGK1P00558 417 aa26.58■■□□□ 1.85
SMARCD3-203ENST00000392811 SLC10A3P09131 477 aa26.58■■□□□ 1.85
SMARCD3-203ENST00000392811 SULT1E1P49888 294 aa26.58■■□□□ 1.85
SMARCD3-203ENST00000392811 AFF1P51825 1210 aaKnown RBP26.58■■□□□ 1.85
SMARCD3-203ENST00000392811 SLC25A52Q3SY17 297 aa26.58■■□□□ 1.85
SMARCD3-203ENST00000392811 ADGRD1Q6QNK2 874 aa26.58■■□□□ 1.85
SMARCD3-203ENST00000392811 GAD1Q99259 594 aa26.58■■□□□ 1.85
SMARCD3-203ENST00000392811 AVILO75366 819 aa26.57■■□□□ 1.84
SMARCD3-203ENST00000392811 FAM163BP0C2L3 166 aa26.57■■□□□ 1.84
SMARCD3-203ENST00000392811 ATP2A2P16615 1042 aaKnown RBP26.57■■□□□ 1.84
SMARCD3-203ENST00000392811 ZFXP17010 805 aaPredicted RBP26.57■■□□□ 1.84
SMARCD3-203ENST00000392811 SLC18A1P54219 525 aa26.57■■□□□ 1.84
SMARCD3-203ENST00000392811 INHBEP58166 350 aa26.57■■□□□ 1.84
SMARCD3-203ENST00000392811 IL9RQ01113 521 aa26.57■■□□□ 1.84
SMARCD3-203ENST00000392811 MDH1BQ5I0G3 518 aa26.57■■□□□ 1.84
SMARCD3-203ENST00000392811 FAM131BQ86XD5 332 aa26.57■■□□□ 1.84
SMARCD3-203ENST00000392811 PYROXD2Q8N2H3 581 aa26.57■■□□□ 1.84
SMARCD3-203ENST00000392811 CCDC110Q8TBZ0 833 aa26.57■■□□□ 1.84
SMARCD3-203ENST00000392811 SENP8Q96LD8 212 aa26.57■■□□□ 1.84
SMARCD3-203ENST00000392811 KDM4CQ9H3R0 1056 aa26.57■■□□□ 1.84
SMARCD3-203ENST00000392811 SLC38A7Q9NVC3 462 aa26.57■■□□□ 1.84
SMARCD3-203ENST00000392811 ETNK2Q9NVF9 386 aa26.57■■□□□ 1.84
SMARCD3-203ENST00000392811 SMG5Q9UPR3 1016 aaKnown RBP26.57■■□□□ 1.84
SMARCD3-203ENST00000392811 SCN10AQ9Y5Y9 1956 aa26.57■■□□□ 1.84
SMARCD3-203ENST00000392811 DNM1LO00429 736 aa26.56■■□□□ 1.84
SMARCD3-203ENST00000392811 DAB1O75553 588 aa26.56■■□□□ 1.84
SMARCD3-203ENST00000392811 ASMTLO95671 621 aa26.56■■□□□ 1.84
SMARCD3-203ENST00000392811 CYBAP13498 195 aa26.56■■□□□ 1.84
SMARCD3-203ENST00000392811 FOXN2P32314 431 aa26.56■■□□□ 1.84
SMARCD3-203ENST00000392811 MRPS5P82675 430 aaKnown RBP26.56■■□□□ 1.84
SMARCD3-203ENST00000392811 ZKSCAN8Q15776 578 aaPredicted RBP26.56■■□□□ 1.84
SMARCD3-203ENST00000392811 LACTB2Q53H82 288 aaPredicted RBP26.56■■□□□ 1.84
SMARCD3-203ENST00000392811 SLC45A4Q5BKX6 768 aa26.56■■□□□ 1.84
SMARCD3-203ENST00000392811 CLEC20AQ6ZU45 233 aa26.56■■□□□ 1.84
SMARCD3-203ENST00000392811 AGGF1Q8N302 714 aaeCLIP26.56■■□□□ 1.84
SMARCD3-203ENST00000392811 LPPQ93052 612 aa26.56■■□□□ 1.84
SMARCD3-203ENST00000392811 PAIP2Q9BPZ3 127 aaKnown RBP26.56■■□□□ 1.84
SMARCD3-203ENST00000392811 MED10Q9BTT4 135 aa26.56■■□□□ 1.84
SMARCD3-203ENST00000392811 KLC2Q9H0B6 622 aa26.56■■□□□ 1.84
SMARCD3-203ENST00000392811 ACTR5Q9H9F9 607 aaPredicted RBP26.56■■□□□ 1.84
SMARCD3-203ENST00000392811 KBTBD13C9JR72 458 aa26.56■■□□□ 1.84
SMARCD3-203ENST00000392811 CHRNA1P02708 482 aa26.56■■□□□ 1.84
SMARCD3-203ENST00000392811 NDUFV1P49821 464 aa26.56■■□□□ 1.84
SMARCD3-203ENST00000392811 XRCC4Q13426 336 aa26.56■■□□□ 1.84
SMARCD3-203ENST00000392811 DCAF6Q58WW2 860 aa26.56■■□□□ 1.84
SMARCD3-203ENST00000392811 OTUD1Q5VV17 481 aaPredicted RBP26.56■■□□□ 1.84
SMARCD3-203ENST00000392811 RSPH3Q86UC2 560 aa26.56■■□□□ 1.84
SMARCD3-203ENST00000392811 DCAKDQ8WVC6 231 aa26.56■■□□□ 1.84
SMARCD3-203ENST00000392811 KCTD13Q8WZ19 329 aa26.56■■□□□ 1.84
SMARCD3-203ENST00000392811 SENP6Q9GZR1 1112 aaPredicted RBP26.56■■□□□ 1.84
SMARCD3-203ENST00000392811 DDX43Q9NXZ2 648 aaKnown RBP26.56■■□□□ 1.84
SMARCD3-203ENST00000392811 FZD10Q9ULW2 581 aa26.56■■□□□ 1.84
SMARCD3-203ENST00000392811 USP3Q9Y6I4 520 aa26.56■■□□□ 1.84
SMARCD3-203ENST00000392811 GOT1P17174 413 aa26.55■■□□□ 1.84
SMARCD3-203ENST00000392811 TAC1P20366 129 aa26.55■■□□□ 1.84
SMARCD3-203ENST00000392811 AMPD1P23109 780 aa26.55■■□□□ 1.84
SMARCD3-203ENST00000392811 RPA3P35244 121 aaPredicted RBP26.55■■□□□ 1.84
SMARCD3-203ENST00000392811 MSH2P43246 934 aa26.55■■□□□ 1.84
SMARCD3-203ENST00000392811 NR2C2P49116 596 aa26.55■■□□□ 1.84
SMARCD3-203ENST00000392811 YWHAZP63104 245 aaKnown RBP26.55■■□□□ 1.84
SMARCD3-203ENST00000392811 PITX1P78337 314 aaPredicted RBP26.55■■□□□ 1.84
SMARCD3-203ENST00000392811 CBLBQ13191 982 aa26.55■■□□□ 1.84
SMARCD3-203ENST00000392811 CCDC33Q8N5R6 958 aa26.55■■□□□ 1.84
SMARCD3-203ENST00000392811 ETNK1Q9HBU6 452 aa26.55■■□□□ 1.84
SMARCD3-203ENST00000392811 LRRC4Q9HBW1 653 aa26.55■■□□□ 1.84
SMARCD3-203ENST00000392811 CRTAC1Q9NQ79 661 aa26.55■■□□□ 1.84
SMARCD3-203ENST00000392811 MIOSQ9NXC5 875 aa26.55■■□□□ 1.84
SMARCD3-203ENST00000392811 USP15Q9Y4E8 981 aaPredicted RBP26.55■■□□□ 1.84
SMARCD3-203ENST00000392811 TYROBPO43914 113 aa26.55■■□□□ 1.84
SMARCD3-203ENST00000392811 MAGEA6P43360 314 aa26.55■■□□□ 1.84
SMARCD3-203ENST00000392811 NCBP2-AS2Q69YL0 99 aa26.55■■□□□ 1.84
SMARCD3-203ENST00000392811 PACS2Q86VP3 889 aa26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms