RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 CCDC114Q96M63 670 aa12.7□□□□□ -0.38
SPTBN1-203ENST00000389980 ZNF558Q96NG5 402 aa12.7□□□□□ -0.38
SPTBN1-203ENST00000389980 SEPT5Q99719 369 aaPredicted RBP12.7□□□□□ -0.38
SPTBN1-203ENST00000389980 DHX35Q9H5Z1 703 aaKnown RBP12.7□□□□□ -0.38
SPTBN1-203ENST00000389980 PCDH18Q9HCL0 1135 aa12.7□□□□□ -0.38
SPTBN1-203ENST00000389980 PNPLA8Q9NP80 782 aa12.7□□□□□ -0.38
SPTBN1-203ENST00000389980 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.7□□□□□ -0.38
SPTBN1-203ENST00000389980 DNPEPQ9ULA0 475 aa12.7□□□□□ -0.38
SPTBN1-203ENST00000389980 UTP11Q9Y3A2 253 aaKnown RBP12.7□□□□□ -0.38
SPTBN1-203ENST00000389980 CHD9Q3L8U1 2897 aa12.7□□□□□ -0.38
SPTBN1-203ENST00000389980 H7C4K7 107 aa12.7□□□□□ -0.38
SPTBN1-203ENST00000389980 ENDOD1O94919 500 aa12.7□□□□□ -0.38
SPTBN1-203ENST00000389980 FGBP02675 491 aa12.7□□□□□ -0.38
SPTBN1-203ENST00000389980 FAM153BP0C7A2 387 aa12.7□□□□□ -0.38
SPTBN1-203ENST00000389980 OR1D2P34982 312 aa12.7□□□□□ -0.38
SPTBN1-203ENST00000389980 FNTAP49354 379 aa12.7□□□□□ -0.38
SPTBN1-203ENST00000389980 DEUP1Q05D60 604 aa12.7□□□□□ -0.38
SPTBN1-203ENST00000389980 DUSP4Q13115 394 aa12.7□□□□□ -0.38
SPTBN1-203ENST00000389980 DHX34Q14147 1143 aaKnown RBP12.7□□□□□ -0.38
SPTBN1-203ENST00000389980 TRIP13Q15645 432 aaPredicted RBP12.7□□□□□ -0.38
SPTBN1-203ENST00000389980 PSMD5Q16401 504 aa12.7□□□□□ -0.38
SPTBN1-203ENST00000389980 CCNG2Q16589 344 aa12.7□□□□□ -0.38
SPTBN1-203ENST00000389980 MGAT5BQ3V5L5 792 aa12.7□□□□□ -0.38
SPTBN1-203ENST00000389980 FAM153CQ494X1 144 aa12.7□□□□□ -0.38
SPTBN1-203ENST00000389980 KIAA1841Q6NSI8 718 aa12.7□□□□□ -0.38
SPTBN1-203ENST00000389980 HDXQ7Z353 690 aa12.7□□□□□ -0.38
SPTBN1-203ENST00000389980 RNF168Q8IYW5 571 aaPredicted RBP12.7□□□□□ -0.38
SPTBN1-203ENST00000389980 SLC39A11Q8N1S5 342 aa12.7□□□□□ -0.38
SPTBN1-203ENST00000389980 COLGALT1Q8NBJ5 622 aa12.7□□□□□ -0.38
SPTBN1-203ENST00000389980 NEUROG2Q9H2A3 272 aa12.7□□□□□ -0.38
SPTBN1-203ENST00000389980 YY1AP1Q9H869 796 aa12.7□□□□□ -0.38
SPTBN1-203ENST00000389980 C10orf88Q9H8K7 445 aa12.7□□□□□ -0.38
SPTBN1-203ENST00000389980 FAM153AQ9UHL3 310 aa12.7□□□□□ -0.38
SPTBN1-203ENST00000389980 NUDT5Q9UKK9 219 aa12.7□□□□□ -0.38
SPTBN1-203ENST00000389980 STAP1Q9ULZ2 295 aa12.7□□□□□ -0.38
SPTBN1-203ENST00000389980 AP4E1Q9UPM8 1137 aa12.7□□□□□ -0.38
SPTBN1-203ENST00000389980 GREB1Q4ZG55 1949 aa12.7□□□□□ -0.38
SPTBN1-203ENST00000389980 CDH23Q9H251 3354 aa12.7□□□□□ -0.38
SPTBN1-203ENST00000389980 WDR27A2RRH5 827 aa12.69□□□□□ -0.38
SPTBN1-203ENST00000389980 BHMG1C9JSJ3 638 aaPredicted RBP12.69□□□□□ -0.38
SPTBN1-203ENST00000389980 EFCAB14O75071 495 aa12.69□□□□□ -0.38
SPTBN1-203ENST00000389980 BAIAP3O94812 1187 aa12.69□□□□□ -0.38
SPTBN1-203ENST00000389980 PECAM1P16284 738 aaPredicted RBP12.69□□□□□ -0.38
SPTBN1-203ENST00000389980 OAS2P29728 719 aaKnown RBP12.69□□□□□ -0.38
SPTBN1-203ENST00000389980 L1CAMP32004 1257 aa12.69□□□□□ -0.38
SPTBN1-203ENST00000389980 TNNT3P45378 269 aaPredicted RBP12.69□□□□□ -0.38
SPTBN1-203ENST00000389980 FPGSQ05932 587 aa12.69□□□□□ -0.38
SPTBN1-203ENST00000389980 MTMR3Q13615 1198 aa12.69□□□□□ -0.38
SPTBN1-203ENST00000389980 HLTFQ14527 1009 aaKnown RBP eCLIP12.69□□□□□ -0.38
SPTBN1-203ENST00000389980 VSTM1Q6UX27 236 aa12.69□□□□□ -0.38
SPTBN1-203ENST00000389980 NPNTQ6UXI9 565 aa12.69□□□□□ -0.38
SPTBN1-203ENST00000389980 B4GALNT4Q76KP1 1039 aa12.69□□□□□ -0.38
SPTBN1-203ENST00000389980 BNIPLQ7Z465 357 aa12.69□□□□□ -0.38
SPTBN1-203ENST00000389980 AENQ8WTP8 325 aaKnown RBP12.69□□□□□ -0.38
SPTBN1-203ENST00000389980 TEKT4Q8WW24 435 aa12.69□□□□□ -0.38
SPTBN1-203ENST00000389980 AUTS2Q8WXX7 1259 aa12.69□□□□□ -0.38
SPTBN1-203ENST00000389980 IRGQQ8WZA9 623 aa12.69□□□□□ -0.38
SPTBN1-203ENST00000389980 TMEM169Q96HH4 297 aa12.69□□□□□ -0.38
SPTBN1-203ENST00000389980 KCTD15Q96SI1 283 aaPredicted RBP12.69□□□□□ -0.38
SPTBN1-203ENST00000389980 ERP44Q9BS26 406 aa12.69□□□□□ -0.38
SPTBN1-203ENST00000389980 NMUR1Q9HB89 426 aa12.69□□□□□ -0.38
SPTBN1-203ENST00000389980 ANLNQ9NQW6 1124 aa12.69□□□□□ -0.38
SPTBN1-203ENST00000389980 MTMR10Q9NXD2 777 aa12.69□□□□□ -0.38
SPTBN1-203ENST00000389980 SNX24Q9Y343 169 aa12.69□□□□□ -0.38
SPTBN1-203ENST00000389980 MAP2K7O14733 419 aa12.69□□□□□ -0.38
SPTBN1-203ENST00000389980 TRIM66O15016 1216 aa12.69□□□□□ -0.38
SPTBN1-203ENST00000389980 MDM4O15151 490 aa12.69□□□□□ -0.38
SPTBN1-203ENST00000389980 LIASO43766 372 aa12.69□□□□□ -0.38
SPTBN1-203ENST00000389980 ECEL1O95672 775 aa12.69□□□□□ -0.38
SPTBN1-203ENST00000389980 DNAJB2P25686 324 aa12.69□□□□□ -0.38
SPTBN1-203ENST00000389980 ECHS1P30084 290 aa12.69□□□□□ -0.38
SPTBN1-203ENST00000389980 RDXP35241 583 aaKnown RBP12.69□□□□□ -0.38
SPTBN1-203ENST00000389980 YWHAGP61981 247 aaKnown RBP eCLIP12.69□□□□□ -0.38
SPTBN1-203ENST00000389980 OTUD4Q01804 1114 aaKnown RBP12.69□□□□□ -0.38
SPTBN1-203ENST00000389980 ROR1Q01973 937 aa12.69□□□□□ -0.38
SPTBN1-203ENST00000389980 KRT17Q04695 432 aa12.69□□□□□ -0.38
SPTBN1-203ENST00000389980 CASP8Q14790 479 aa12.69□□□□□ -0.38
SPTBN1-203ENST00000389980 PPP1R7Q15435 360 aa12.69□□□□□ -0.38
SPTBN1-203ENST00000389980 FAM182AQ5T1J6 154 aa12.69□□□□□ -0.38
SPTBN1-203ENST00000389980 DUPD1Q68J44 220 aa12.69□□□□□ -0.38
SPTBN1-203ENST00000389980 BBS12Q6ZW61 710 aa12.69□□□□□ -0.38
SPTBN1-203ENST00000389980 SCD5Q86SK9 330 aa12.69□□□□□ -0.38
SPTBN1-203ENST00000389980 CMTR2Q8IYT2 770 aaKnown RBP12.69□□□□□ -0.38
SPTBN1-203ENST00000389980 NUP93Q8N1F7 819 aa12.69□□□□□ -0.38
SPTBN1-203ENST00000389980 ACTL9Q8TC94 416 aa12.69□□□□□ -0.38
SPTBN1-203ENST00000389980 RUBCNQ92622 972 aa12.69□□□□□ -0.38
SPTBN1-203ENST00000389980 MAK16Q9BXY0 300 aaKnown RBP12.69□□□□□ -0.38
SPTBN1-203ENST00000389980 FAM204AQ9H8W3 233 aa12.69□□□□□ -0.38
SPTBN1-203ENST00000389980 WDR6Q9NNW5 1121 aaKnown RBP12.69□□□□□ -0.38
SPTBN1-203ENST00000389980 DDIT4Q9NX09 232 aa12.69□□□□□ -0.38
SPTBN1-203ENST00000389980 OSER1Q9NX31 292 aa12.69□□□□□ -0.38
SPTBN1-203ENST00000389980 MTRRQ9UBK8 725 aa12.69□□□□□ -0.38
SPTBN1-203ENST00000389980 FZD10Q9ULW2 581 aa12.69□□□□□ -0.38
SPTBN1-203ENST00000389980 MYO7AQ13402 2215 aa12.68□□□□□ -0.38
SPTBN1-203ENST00000389980 A0A1W2PQH9 124 aa12.68□□□□□ -0.38
SPTBN1-203ENST00000389980 FAM187AA6NFU0 413 aa12.68□□□□□ -0.38
SPTBN1-203ENST00000389980 H3BQF6 201 aa12.68□□□□□ -0.38
SPTBN1-203ENST00000389980 I6L893 689 aaPredicted RBP12.68□□□□□ -0.38
SPTBN1-203ENST00000389980 MAP3K6O95382 1288 aa12.68□□□□□ -0.38
SPTBN1-203ENST00000389980 SOD2P04179 222 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms