RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 TRAIPQ9BWF2 469 aa10.57□□□□□ -0.72
LTN1-203ENST00000389195 SIK2Q9H0K1 926 aa10.57□□□□□ -0.72
LTN1-203ENST00000389195 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.57□□□□□ -0.72
LTN1-203ENST00000389195 XPO7Q9UIA9 1087 aaKnown RBP10.57□□□□□ -0.72
LTN1-203ENST00000389195 SCN5AQ14524 2016 aa10.57□□□□□ -0.72
LTN1-203ENST00000389195 THSD7BQ9C0I4 1608 aa10.57□□□□□ -0.72
LTN1-203ENST00000389195 MDM4O15151 490 aa10.57□□□□□ -0.72
LTN1-203ENST00000389195 SRGAP2BP0DMP2 458 aa10.57□□□□□ -0.72
LTN1-203ENST00000389195 RARGP13631 454 aa10.57□□□□□ -0.72
LTN1-203ENST00000389195 PCBP1Q15365 356 aaKnown RBP eCLIP10.57□□□□□ -0.72
LTN1-203ENST00000389195 BBS9Q3SYG4 887 aa10.57□□□□□ -0.72
LTN1-203ENST00000389195 SLC39A12Q504Y0 691 aa10.57□□□□□ -0.72
LTN1-203ENST00000389195 BSPRYQ5W0U4 402 aa10.57□□□□□ -0.72
LTN1-203ENST00000389195 OVOS1Q6IE37 1185 aa10.57□□□□□ -0.72
LTN1-203ENST00000389195 HIBCHQ6NVY1 386 aaPredicted RBP10.57□□□□□ -0.72
LTN1-203ENST00000389195 TAS1R1Q7RTX1 841 aa10.57□□□□□ -0.72
LTN1-203ENST00000389195 LIMS2Q7Z4I7 341 aa10.57□□□□□ -0.72
LTN1-203ENST00000389195 AGGF1Q8N302 714 aaeCLIP10.57□□□□□ -0.72
LTN1-203ENST00000389195 DIS3LQ8TF46 1054 aaKnown RBP10.57□□□□□ -0.72
LTN1-203ENST00000389195 RSPH1Q8WYR4 309 aa10.57□□□□□ -0.72
LTN1-203ENST00000389195 ZMYND15Q9H091 742 aa10.57□□□□□ -0.72
LTN1-203ENST00000389195 RNF208Q9H0X6 261 aa10.57□□□□□ -0.72
LTN1-203ENST00000389195 TBC1D13Q9NVG8 400 aa10.57□□□□□ -0.72
LTN1-203ENST00000389195 IL1RAPL1Q9NZN1 696 aa10.57□□□□□ -0.72
LTN1-203ENST00000389195 WHRNQ9P202 907 aa10.57□□□□□ -0.72
LTN1-203ENST00000389195 GIT1Q9Y2X7 761 aa10.57□□□□□ -0.72
LTN1-203ENST00000389195 TDRD15B5MCY1 1934 aaKnown RBP10.56□□□□□ -0.72
LTN1-203ENST00000389195 C2CD2LO14523 706 aa10.56□□□□□ -0.72
LTN1-203ENST00000389195 SCAMP3O14828 347 aaKnown RBP10.56□□□□□ -0.72
LTN1-203ENST00000389195 XPO1O14980 1071 aaKnown RBP10.56□□□□□ -0.72
LTN1-203ENST00000389195 TBX18O95935 607 aa10.56□□□□□ -0.72
LTN1-203ENST00000389195 RPL17P18621 184 aaKnown RBP10.56□□□□□ -0.72
LTN1-203ENST00000389195 CYP2C18P33260 490 aa10.56□□□□□ -0.72
LTN1-203ENST00000389195 MAGEA4P43358 317 aa10.56□□□□□ -0.72
LTN1-203ENST00000389195 PTK7Q13308 1070 aa10.56□□□□□ -0.72
LTN1-203ENST00000389195 SLC26A9Q7LBE3 791 aa10.56□□□□□ -0.72
LTN1-203ENST00000389195 TTC16Q8NEE8 873 aa10.56□□□□□ -0.72
LTN1-203ENST00000389195 GRK7Q8WTQ7 553 aa10.56□□□□□ -0.72
LTN1-203ENST00000389195 GPR62Q9BZJ7 368 aa10.56□□□□□ -0.72
LTN1-203ENST00000389195 VPS37BQ9H9H4 285 aa10.56□□□□□ -0.72
LTN1-203ENST00000389195 TPX2Q9ULW0 747 aaKnown RBP10.56□□□□□ -0.72
LTN1-203ENST00000389195 C9IYK1 514 aa10.56□□□□□ -0.72
LTN1-203ENST00000389195 KCNK1O00180 336 aa10.56□□□□□ -0.72
LTN1-203ENST00000389195 RASGRF2O14827 1237 aa10.56□□□□□ -0.72
LTN1-203ENST00000389195 PCK1P35558 622 aa10.56□□□□□ -0.72
LTN1-203ENST00000389195 GRIK1P39086 918 aa10.56□□□□□ -0.72
LTN1-203ENST00000389195 MATKP42679 507 aa10.56□□□□□ -0.72
LTN1-203ENST00000389195 IRF5Q13568 498 aa10.56□□□□□ -0.72
LTN1-203ENST00000389195 AUHQ13825 339 aaKnown RBP10.56□□□□□ -0.72
LTN1-203ENST00000389195 ZSCAN26Q16670 478 aa10.56□□□□□ -0.72
LTN1-203ENST00000389195 RNASEH2BQ5TBB1 312 aaKnown RBP10.56□□□□□ -0.72
LTN1-203ENST00000389195 RSPO2Q6UXX9 243 aaPredicted RBP10.56□□□□□ -0.72
LTN1-203ENST00000389195 ZNF598Q86UK7 904 aaKnown RBP10.56□□□□□ -0.72
LTN1-203ENST00000389195 MYCBPAPQ8TBZ2 947 aa10.56□□□□□ -0.72
LTN1-203ENST00000389195 HHIPL1Q96JK4 782 aa10.56□□□□□ -0.72
LTN1-203ENST00000389195 CSPG4P5Q96PW8 444 aa10.56□□□□□ -0.72
LTN1-203ENST00000389195 KLF6Q99612 283 aaPredicted RBP10.56□□□□□ -0.72
LTN1-203ENST00000389195 NRDE2Q9H7Z3 1164 aa10.56□□□□□ -0.72
LTN1-203ENST00000389195 CHST12Q9NRB3 414 aa10.56□□□□□ -0.72
LTN1-203ENST00000389195 RAB6BQ9NRW1 208 aa10.56□□□□□ -0.72
LTN1-203ENST00000389195 SLC38A7Q9NVC3 462 aa10.56□□□□□ -0.72
LTN1-203ENST00000389195 DDIT4Q9NX09 232 aa10.56□□□□□ -0.72
LTN1-203ENST00000389195 RSPH14Q9UHP6 348 aa10.56□□□□□ -0.72
LTN1-203ENST00000389195 RALGAPA2Q2PPJ7 1873 aa10.55□□□□□ -0.72
LTN1-203ENST00000389195 MYO15AQ9UKN7 3530 aa10.55□□□□□ -0.72
LTN1-203ENST00000389195 APOC4-APOC2K7ER74 178 aa10.55□□□□□ -0.72
LTN1-203ENST00000389195 DNALI1O14645 258 aaPredicted RBP10.55□□□□□ -0.72
LTN1-203ENST00000389195 MCF2LO15068 1137 aa10.55□□□□□ -0.72
LTN1-203ENST00000389195 RGS16O15492 202 aaPredicted RBP10.55□□□□□ -0.72
LTN1-203ENST00000389195 METTL18O95568 372 aa10.55□□□□□ -0.72
LTN1-203ENST00000389195 TTC4O95801 387 aa10.55□□□□□ -0.72
LTN1-203ENST00000389195 MOCS2O96007 188 aaPredicted RBP10.55□□□□□ -0.72
LTN1-203ENST00000389195 APOC2P02655 101 aa10.55□□□□□ -0.72
LTN1-203ENST00000389195 APRTP07741 180 aa10.55□□□□□ -0.72
LTN1-203ENST00000389195 HOXD10P28358 340 aa10.55□□□□□ -0.72
LTN1-203ENST00000389195 TUSC3Q13454 348 aa10.55□□□□□ -0.72
LTN1-203ENST00000389195 MTMR3Q13615 1198 aa10.55□□□□□ -0.72
LTN1-203ENST00000389195 SPARCL1Q14515 664 aa10.55□□□□□ -0.72
LTN1-203ENST00000389195 GLIPR1L2Q4G1C9 344 aa10.55□□□□□ -0.72
LTN1-203ENST00000389195 KCNT2Q6UVM3 1135 aa10.55□□□□□ -0.72
LTN1-203ENST00000389195 MRPL10Q7Z7H8 261 aaKnown RBP10.55□□□□□ -0.72
LTN1-203ENST00000389195 ANKRD42Q8N9B4 389 aa10.55□□□□□ -0.72
LTN1-203ENST00000389195 CCNYQ8ND76 341 aa10.55□□□□□ -0.72
LTN1-203ENST00000389195 BCAS4Q8TDM0 211 aa10.55□□□□□ -0.72
LTN1-203ENST00000389195 SLCO2A1Q92959 643 aa10.55□□□□□ -0.72
LTN1-203ENST00000389195 CELF6Q96J87 481 aaKnown RBP10.55□□□□□ -0.72
LTN1-203ENST00000389195 USP29Q9HBJ7 922 aa10.55□□□□□ -0.72
LTN1-203ENST00000389195 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.55□□□□□ -0.72
LTN1-203ENST00000389195 CHMP2BQ9UQN3 213 aa10.55□□□□□ -0.72
LTN1-203ENST00000389195 HHLA1C9JL84 531 aa10.55□□□□□ -0.72
LTN1-203ENST00000389195 GOLGA8RI6L899 631 aa10.55□□□□□ -0.72
LTN1-203ENST00000389195 MFSD11O43934 449 aa10.55□□□□□ -0.72
LTN1-203ENST00000389195 SPAG7O75391 227 aa10.55□□□□□ -0.72
LTN1-203ENST00000389195 ITGAVP06756 1048 aa10.55□□□□□ -0.72
LTN1-203ENST00000389195 CCT5P48643 541 aa10.55□□□□□ -0.72
LTN1-203ENST00000389195 USP46P62068 366 aa10.55□□□□□ -0.72
LTN1-203ENST00000389195 ROR1Q01973 937 aa10.55□□□□□ -0.72
LTN1-203ENST00000389195 DEUP1Q05D60 604 aa10.55□□□□□ -0.72
LTN1-203ENST00000389195 MPP2Q14168 576 aa10.55□□□□□ -0.72
LTN1-203ENST00000389195 CLUL1Q15846 466 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms