RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 EGFL6Q8IUX8 553 aa15.52■□□□□ 0.08
SCFD2-201ENST00000388940 C18orf25Q96B23 403 aaPredicted RBP15.52■□□□□ 0.08
SCFD2-201ENST00000388940 SERAC1Q96JX3 654 aa15.52■□□□□ 0.08
SCFD2-201ENST00000388940 B3GNT5Q9BYG0 378 aa15.52■□□□□ 0.08
SCFD2-201ENST00000388940 LRMDAQ9H2I8 198 aa15.52■□□□□ 0.08
SCFD2-201ENST00000388940 MANSC1Q9H8J5 431 aa15.52■□□□□ 0.08
SCFD2-201ENST00000388940 POPDC2Q9HBU9 364 aa15.52■□□□□ 0.08
SCFD2-201ENST00000388940 SMIM35A0A1B0GVV1 85 aa15.52■□□□□ 0.07
SCFD2-201ENST00000388940 AVILO75366 819 aa15.52■□□□□ 0.07
SCFD2-201ENST00000388940 IL1BP01584 269 aa15.52■□□□□ 0.07
SCFD2-201ENST00000388940 TROVE2P10155 538 aaKnown RBP eCLIP15.52■□□□□ 0.07
SCFD2-201ENST00000388940 TPSB2P20231 275 aa15.52■□□□□ 0.07
SCFD2-201ENST00000388940 MAGEA3P43357 314 aa15.52■□□□□ 0.07
SCFD2-201ENST00000388940 TPSAB1Q15661 275 aa15.52■□□□□ 0.07
SCFD2-201ENST00000388940 LIMS2Q7Z4I7 341 aa15.52■□□□□ 0.07
SCFD2-201ENST00000388940 GPR142Q7Z601 462 aa15.52■□□□□ 0.07
SCFD2-201ENST00000388940 ANKRD23Q86SG2 305 aa15.52■□□□□ 0.07
SCFD2-201ENST00000388940 KIF2BQ8N4N8 673 aa15.52■□□□□ 0.07
SCFD2-201ENST00000388940 INPP5DQ92835 1189 aa15.52■□□□□ 0.07
SCFD2-201ENST00000388940 TMEM237Q96Q45 408 aa15.52■□□□□ 0.07
SCFD2-201ENST00000388940 RAB3IPQ96QF0 476 aaPredicted RBP15.52■□□□□ 0.07
SCFD2-201ENST00000388940 TINF2Q9BSI4 451 aa15.52■□□□□ 0.07
SCFD2-201ENST00000388940 DNAI2Q9GZS0 605 aa15.52■□□□□ 0.07
SCFD2-201ENST00000388940 PRDM16Q9HAZ2 1276 aa15.52■□□□□ 0.07
SCFD2-201ENST00000388940 ETNK1Q9HBU6 452 aa15.52■□□□□ 0.07
SCFD2-201ENST00000388940 GDAP2Q9NXN4 497 aa15.52■□□□□ 0.07
SCFD2-201ENST00000388940 ZC3H7BQ9UGR2 993 aaKnown RBP15.52■□□□□ 0.07
SCFD2-201ENST00000388940 GOLGA8RI6L899 631 aa15.51■□□□□ 0.07
SCFD2-201ENST00000388940 DARSP14868 501 aaKnown RBP15.51■□□□□ 0.07
SCFD2-201ENST00000388940 EZRP15311 586 aaKnown RBP15.51■□□□□ 0.07
SCFD2-201ENST00000388940 GTF2A2P52657 109 aa15.51■□□□□ 0.07
SCFD2-201ENST00000388940 KBTBD7Q8WVZ9 684 aa15.51■□□□□ 0.07
SCFD2-201ENST00000388940 THOC1Q96FV9 657 aaKnown RBP15.51■□□□□ 0.07
SCFD2-201ENST00000388940 HSFY1Q96LI6 401 aa15.51■□□□□ 0.07
SCFD2-201ENST00000388940 KLF6Q99612 283 aaPredicted RBP15.51■□□□□ 0.07
SCFD2-201ENST00000388940 DPEP3Q9H4B8 488 aa15.51■□□□□ 0.07
SCFD2-201ENST00000388940 CDHR5Q9HBB8 845 aa15.51■□□□□ 0.07
SCFD2-201ENST00000388940 MTMR10Q9NXD2 777 aa15.51■□□□□ 0.07
SCFD2-201ENST00000388940 NRCAMQ92823 1304 aa15.51■□□□□ 0.07
SCFD2-201ENST00000388940 MBLAC1A4D2B0 266 aaPredicted RBP15.51■□□□□ 0.07
SCFD2-201ENST00000388940 DCAF8L1A6NGE4 600 aa15.51■□□□□ 0.07
SCFD2-201ENST00000388940 A6NJR5 290 aa15.51■□□□□ 0.07
SCFD2-201ENST00000388940 TGDSO95455 350 aa15.51■□□□□ 0.07
SCFD2-201ENST00000388940 XKR4Q5GH76 650 aa15.51■□□□□ 0.07
SCFD2-201ENST00000388940 FBXO47Q5MNV8 452 aa15.51■□□□□ 0.07
SCFD2-201ENST00000388940 LGSNQ5TDP6 509 aa15.51■□□□□ 0.07
SCFD2-201ENST00000388940 PRPF39Q86UA1 669 aaKnown RBP15.51■□□□□ 0.07
SCFD2-201ENST00000388940 LRRC6Q86X45 466 aa15.51■□□□□ 0.07
SCFD2-201ENST00000388940 CEP57Q86XR8 500 aa15.51■□□□□ 0.07
SCFD2-201ENST00000388940 SLC5A4Q9NY91 659 aa15.51■□□□□ 0.07
SCFD2-201ENST00000388940 SUFUQ9UMX1 484 aa15.51■□□□□ 0.07
SCFD2-201ENST00000388940 TRIM33Q9UPN9 1127 aa15.51■□□□□ 0.07
SCFD2-201ENST00000388940 SLC15A5A6NIM6 579 aa15.5■□□□□ 0.07
SCFD2-201ENST00000388940 TRAFD1O14545 582 aaPredicted RBP15.5■□□□□ 0.07
SCFD2-201ENST00000388940 WFS1O76024 890 aa15.5■□□□□ 0.07
SCFD2-201ENST00000388940 RECQL4O94761 1208 aa15.5■□□□□ 0.07
SCFD2-201ENST00000388940 SNRPAP09012 282 aaKnown RBP15.5■□□□□ 0.07
SCFD2-201ENST00000388940 TFE3P19532 575 aaPredicted RBP15.5■□□□□ 0.07
SCFD2-201ENST00000388940 GNL1P36915 607 aaPredicted RBP15.5■□□□□ 0.07
SCFD2-201ENST00000388940 PNPLA4P41247 253 aa15.5■□□□□ 0.07
SCFD2-201ENST00000388940 PPP6R3Q5H9R7 873 aaPredicted RBP15.5■□□□□ 0.07
SCFD2-201ENST00000388940 STRADAQ7RTN6 431 aa15.5■□□□□ 0.07
SCFD2-201ENST00000388940 NLRP9Q7RTR0 991 aa15.5■□□□□ 0.07
SCFD2-201ENST00000388940 VPS52Q8N1B4 723 aa15.5■□□□□ 0.07
SCFD2-201ENST00000388940 CFAP36Q96G28 342 aa15.5■□□□□ 0.07
SCFD2-201ENST00000388940 ZNF560Q96MR9 790 aa15.5■□□□□ 0.07
SCFD2-201ENST00000388940 QKIQ96PU8 341 aaKnown RBP eCLIP15.5■□□□□ 0.076e-7■■■■■ 45
SCFD2-201ENST00000388940 FAM49AQ9H0Q0 323 aaPredicted RBP15.5■□□□□ 0.07
SCFD2-201ENST00000388940 PLAC1Q9HBJ0 212 aa15.5■□□□□ 0.07
SCFD2-201ENST00000388940 SAR1AQ9NR31 198 aa15.5■□□□□ 0.07
SCFD2-201ENST00000388940 AP4E1Q9UPM8 1137 aa15.5■□□□□ 0.07
SCFD2-201ENST00000388940 CCL15-CCL14A0A0B4J2E2 113 aa15.49■□□□□ 0.07
SCFD2-201ENST00000388940 KPNA7A9QM74 516 aa15.49■□□□□ 0.07
SCFD2-201ENST00000388940 KLF11O14901 512 aa15.49■□□□□ 0.07
SCFD2-201ENST00000388940 XPOTO43592 962 aaKnown RBP15.49■□□□□ 0.07
SCFD2-201ENST00000388940 KRT37O76014 449 aa15.49■□□□□ 0.07
SCFD2-201ENST00000388940 APOEP02649 317 aa15.49■□□□□ 0.07
SCFD2-201ENST00000388940 APRTP07741 180 aa15.49■□□□□ 0.07
SCFD2-201ENST00000388940 T-ENOLP0DO92 83 aa15.49■□□□□ 0.07
SCFD2-201ENST00000388940 KCNE1P15382 129 aa15.49■□□□□ 0.07
SCFD2-201ENST00000388940 CCND1P24385 295 aa15.49■□□□□ 0.07
SCFD2-201ENST00000388940 RASSF2P50749 326 aa15.49■□□□□ 0.07
SCFD2-201ENST00000388940 TMEM62Q0P6H9 643 aa15.49■□□□□ 0.07
SCFD2-201ENST00000388940 SLC10A2Q12908 348 aaPredicted RBP15.49■□□□□ 0.07
SCFD2-201ENST00000388940 CCL15Q16663 113 aa15.49■□□□□ 0.07
SCFD2-201ENST00000388940 SYCP2LQ5T4T6 812 aa15.49■□□□□ 0.07
SCFD2-201ENST00000388940 EP400NLQ6ZTU2 488 aa15.49■□□□□ 0.07
SCFD2-201ENST00000388940 PSTKQ8IV42 348 aaKnown RBP15.49■□□□□ 0.07
SCFD2-201ENST00000388940 C7orf31Q8N865 590 aa15.49■□□□□ 0.07
SCFD2-201ENST00000388940 CCDC110Q8TBZ0 833 aa15.49■□□□□ 0.07
SCFD2-201ENST00000388940 CLEC4CQ8WTT0 213 aa15.49■□□□□ 0.07
SCFD2-201ENST00000388940 SIGLEC10Q96LC7 697 aa15.49■□□□□ 0.07
SCFD2-201ENST00000388940 KCTD15Q96SI1 283 aaPredicted RBP15.49■□□□□ 0.07
SCFD2-201ENST00000388940 LPIN3Q9BQK8 851 aa15.49■□□□□ 0.07
SCFD2-201ENST00000388940 DHX35Q9H5Z1 703 aaKnown RBP15.49■□□□□ 0.07
SCFD2-201ENST00000388940 MKS1Q9NXB0 559 aa15.49■□□□□ 0.07
SCFD2-201ENST00000388940 RCOR3Q9P2K3 495 aaPredicted RBP15.49■□□□□ 0.07
SCFD2-201ENST00000388940 GJD2Q9UKL4 321 aa15.49■□□□□ 0.07
SCFD2-201ENST00000388940 HES2Q9Y543 173 aa15.49■□□□□ 0.07
SCFD2-201ENST00000388940 SMIM28A0A1B0GU29 152 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms