RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 LY9Q9HBG7 655 aa6.03□□□□□ -1.44
RFX3-204ENST00000382004 TEX14Q8IWB6 1497 aa6.03□□□□□ -1.44
RFX3-204ENST00000382004 PDS5AQ29RF7 1337 aaKnown RBP6.03□□□□□ -1.44
RFX3-204ENST00000382004 ATP9AO75110 1047 aa6.03□□□□□ -1.44
RFX3-204ENST00000382004 SH3BGRLO75368 114 aa6.03□□□□□ -1.44
RFX3-204ENST00000382004 PSIP1O75475 530 aaKnown RBP6.03□□□□□ -1.44
RFX3-204ENST00000382004 HIST1H2ABP04908 130 aa6.03□□□□□ -1.44
RFX3-204ENST00000382004 HK2P52789 917 aa6.03□□□□□ -1.44
RFX3-204ENST00000382004 MTMR2Q13614 643 aa6.03□□□□□ -1.44
RFX3-204ENST00000382004 TCHHL1Q5QJ38 904 aaPredicted RBP6.03□□□□□ -1.44
RFX3-204ENST00000382004 CCNI2Q6ZMN8 369 aaPredicted RBP6.03□□□□□ -1.44
RFX3-204ENST00000382004 HIST3H2AQ7L7L0 130 aa6.03□□□□□ -1.44
RFX3-204ENST00000382004 STRA8Q7Z7C7 330 aa6.03□□□□□ -1.44
RFX3-204ENST00000382004 SYNE4Q8N205 404 aa6.03□□□□□ -1.44
RFX3-204ENST00000382004 HIST1H2ACQ93077 130 aa6.03□□□□□ -1.44
RFX3-204ENST00000382004 HMG20AQ9NP66 347 aa6.03□□□□□ -1.44
RFX3-204ENST00000382004 AGPAT5Q9NUQ2 364 aa6.03□□□□□ -1.44
RFX3-204ENST00000382004 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.03□□□□□ -1.44
RFX3-204ENST00000382004 UBA2Q9UBT2 640 aaPredicted RBP6.03□□□□□ -1.44
RFX3-204ENST00000382004 LIMD1Q9UGP4 676 aa6.03□□□□□ -1.44
RFX3-204ENST00000382004 PNMA8CA0A1B0GUJ8 204 aa6.03□□□□□ -1.44
RFX3-204ENST00000382004 RRN3P2A6NIE6 340 aa6.03□□□□□ -1.44
RFX3-204ENST00000382004 SLC16A3O15427 465 aaKnown RBP6.03□□□□□ -1.44
RFX3-204ENST00000382004 LTFP02788 710 aa6.03□□□□□ -1.44
RFX3-204ENST00000382004 FCGR1AP12314 374 aa6.03□□□□□ -1.44
RFX3-204ENST00000382004 FASP25445 335 aa6.03□□□□□ -1.44
RFX3-204ENST00000382004 USP11P51784 963 aa6.03□□□□□ -1.44
RFX3-204ENST00000382004 EFCAB12Q6NXP0 572 aa6.03□□□□□ -1.44
RFX3-204ENST00000382004 CYB5D1Q6P9G0 228 aa6.03□□□□□ -1.44
RFX3-204ENST00000382004 C4orf22Q6V702 233 aa6.03□□□□□ -1.44
RFX3-204ENST00000382004 MIB1Q86YT6 1006 aa6.03□□□□□ -1.44
RFX3-204ENST00000382004 FAM9CQ8IZT9 166 aa6.03□□□□□ -1.44
RFX3-204ENST00000382004 SCAIQ8N9R8 606 aa6.03□□□□□ -1.44
RFX3-204ENST00000382004 PMM1Q92871 262 aa6.03□□□□□ -1.44
RFX3-204ENST00000382004 APOL2Q9BQE5 337 aa6.03□□□□□ -1.44
RFX3-204ENST00000382004 EHD3Q9NZN3 535 aa6.03□□□□□ -1.44
RFX3-204ENST00000382004 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.03□□□□□ -1.44
RFX3-204ENST00000382004 PCP4L1A6NKN8 68 aa6.03□□□□□ -1.44
RFX3-204ENST00000382004 PDXKO00764 312 aa6.03□□□□□ -1.44
RFX3-204ENST00000382004 COILP38432 576 aaPredicted RBP6.03□□□□□ -1.44
RFX3-204ENST00000382004 CEBPGP53567 150 aa6.03□□□□□ -1.44
RFX3-204ENST00000382004 CSHL1Q14406 222 aa6.03□□□□□ -1.44
RFX3-204ENST00000382004 DGUOKQ16854 277 aa6.03□□□□□ -1.44
RFX3-204ENST00000382004 CLVS1Q8IUQ0 354 aaPredicted RBP6.03□□□□□ -1.44
RFX3-204ENST00000382004 NEK7Q8TDX7 302 aa6.03□□□□□ -1.44
RFX3-204ENST00000382004 FAM172AQ8WUF8 416 aa6.03□□□□□ -1.44
RFX3-204ENST00000382004 PHF21BQ96EK2 531 aa6.03□□□□□ -1.44
RFX3-204ENST00000382004 DPY30Q9C005 99 aa6.03□□□□□ -1.44
RFX3-204ENST00000382004 CIPCQ9C0C6 399 aa6.03□□□□□ -1.44
RFX3-204ENST00000382004 CAB39LQ9H9S4 337 aa6.03□□□□□ -1.44
RFX3-204ENST00000382004 TBX22Q9Y458 520 aa6.03□□□□□ -1.44
RFX3-204ENST00000382004 ADCY6O43306 1168 aa6.02□□□□□ -1.45
RFX3-204ENST00000382004 UCHL3P15374 230 aa6.02□□□□□ -1.45
RFX3-204ENST00000382004 YY1P25490 414 aa6.02□□□□□ -1.45
RFX3-204ENST00000382004 AQP5P55064 265 aa6.02□□□□□ -1.45
RFX3-204ENST00000382004 CDC42EP1Q00587 391 aa6.02□□□□□ -1.45
RFX3-204ENST00000382004 ORC1Q13415 861 aa6.02□□□□□ -1.45
RFX3-204ENST00000382004 TOB2Q14106 344 aaPredicted RBP6.02□□□□□ -1.45
RFX3-204ENST00000382004 RASA2Q15283 850 aa6.02□□□□□ -1.45
RFX3-204ENST00000382004 LIN54Q6MZP7 749 aa6.02□□□□□ -1.45
RFX3-204ENST00000382004 CYP20A1Q6UW02 462 aa6.02□□□□□ -1.45
RFX3-204ENST00000382004 CLEC4GQ6UXB4 293 aa6.02□□□□□ -1.45
RFX3-204ENST00000382004 PALB2Q86YC2 1186 aa6.02□□□□□ -1.45
RFX3-204ENST00000382004 MTFMTQ96DP5 389 aaKnown RBP6.02□□□□□ -1.45
RFX3-204ENST00000382004 APOL4Q9BPW4 351 aa6.02□□□□□ -1.45
RFX3-204ENST00000382004 ERP44Q9BS26 406 aa6.02□□□□□ -1.45
RFX3-204ENST00000382004 DGCR6LQ9BY27 220 aa6.02□□□□□ -1.45
RFX3-204ENST00000382004 UBE2OQ9C0C9 1292 aaKnown RBP6.02□□□□□ -1.45
RFX3-204ENST00000382004 BTBD3Q9Y2F9 522 aa6.02□□□□□ -1.45
RFX3-204ENST00000382004 AAR2Q9Y312 384 aaKnown RBP6.02□□□□□ -1.45
RFX3-204ENST00000382004 MSH4O15457 936 aa6.02□□□□□ -1.45
RFX3-204ENST00000382004 CYP2B6P20813 491 aa6.02□□□□□ -1.45
RFX3-204ENST00000382004 S100GP29377 79 aa6.02□□□□□ -1.45
RFX3-204ENST00000382004 EXOSC10Q01780 885 aaKnown RBP6.02□□□□□ -1.45
RFX3-204ENST00000382004 SEMA3FQ13275 785 aa6.02□□□□□ -1.45
RFX3-204ENST00000382004 TSHZ1Q6ZSZ6 1077 aa6.02□□□□□ -1.45
RFX3-204ENST00000382004 C3orf20Q8ND61 904 aa6.02□□□□□ -1.45
RFX3-204ENST00000382004 EMILIN2Q9BXX0 1053 aa6.02□□□□□ -1.45
RFX3-204ENST00000382004 OXCT2Q9BYC2 517 aaPredicted RBP6.02□□□□□ -1.45
RFX3-204ENST00000382004 NLNQ9BYT8 704 aa6.02□□□□□ -1.45
RFX3-204ENST00000382004 WBP11Q9Y2W2 641 aaKnown RBP6.02□□□□□ -1.45
RFX3-204ENST00000382004 ITGB3P05106 788 aa6.02□□□□□ -1.45
RFX3-204ENST00000382004 S100A6P06703 90 aa6.02□□□□□ -1.45
RFX3-204ENST00000382004 FAM58BPP0C7Q3 252 aa6.02□□□□□ -1.45
RFX3-204ENST00000382004 ODC1P11926 461 aa6.02□□□□□ -1.45
RFX3-204ENST00000382004 STAT5AP42229 794 aa6.02□□□□□ -1.45
RFX3-204ENST00000382004 GSTM5P46439 218 aa6.02□□□□□ -1.45
RFX3-204ENST00000382004 MZT2BQ6NZ67 158 aa6.02□□□□□ -1.45
RFX3-204ENST00000382004 TRAPPC11Q7Z392 1133 aa6.02□□□□□ -1.45
RFX3-204ENST00000382004 ZNF605Q86T29 641 aa6.02□□□□□ -1.45
RFX3-204ENST00000382004 ZSCAN18Q8TBC5 510 aaPredicted RBP6.02□□□□□ -1.45
RFX3-204ENST00000382004 EPS8L3Q8TE67 593 aaKnown RBP6.02□□□□□ -1.45
RFX3-204ENST00000382004 FBXO32Q969P5 355 aa6.02□□□□□ -1.45
RFX3-204ENST00000382004 C18orf25Q96B23 403 aaPredicted RBP6.02□□□□□ -1.45
RFX3-204ENST00000382004 REEP2Q9BRK0 252 aa6.02□□□□□ -1.45
RFX3-204ENST00000382004 TEX13BQ9BXU2 312 aa6.02□□□□□ -1.45
RFX3-204ENST00000382004 PRKD2Q9BZL6 878 aa6.02□□□□□ -1.45
RFX3-204ENST00000382004 RHBGQ9H310 441 aa6.02□□□□□ -1.45
RFX3-204ENST00000382004 COPG2Q9UBF2 871 aa6.02□□□□□ -1.45
RFX3-204ENST00000382004 ZNF112Q9UJU3 913 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms