RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 C1orf54Q8WWF1 131 aa5.9□□□□□ -1.46
RFC1-202ENST00000381897 GJD4Q96KN9 370 aaPredicted RBP5.9□□□□□ -1.46
RFC1-202ENST00000381897 C8orf48Q96LL4 319 aa5.9□□□□□ -1.46
RFC1-202ENST00000381897 NT5C1BQ96P26 610 aa5.9□□□□□ -1.46
RFC1-202ENST00000381897 SLC39A3Q9BRY0 314 aa5.9□□□□□ -1.46
RFC1-202ENST00000381897 OXCT2Q9BYC2 517 aaPredicted RBP5.9□□□□□ -1.46
RFC1-202ENST00000381897 MRPL9Q9BYD2 267 aaKnown RBP5.9□□□□□ -1.46
RFC1-202ENST00000381897 GCOM2Q9BZD3 368 aaPredicted RBP5.9□□□□□ -1.46
RFC1-202ENST00000381897 SLC5A7Q9GZV3 580 aa5.9□□□□□ -1.46
RFC1-202ENST00000381897 GANQ9H2C0 597 aa5.9□□□□□ -1.46
RFC1-202ENST00000381897 TOR3AQ9H497 397 aa5.9□□□□□ -1.46
RFC1-202ENST00000381897 PSTPIP2Q9H939 334 aa5.9□□□□□ -1.46
RFC1-202ENST00000381897 TBCCD1Q9NVR7 557 aa5.9□□□□□ -1.46
RFC1-202ENST00000381897 GID8Q9NWU2 228 aa5.9□□□□□ -1.46
RFC1-202ENST00000381897 TMEM260Q9NX78 707 aa5.9□□□□□ -1.46
RFC1-202ENST00000381897 STRIP2Q9ULQ0 834 aa5.9□□□□□ -1.46
RFC1-202ENST00000381897 SORCS3Q9UPU3 1222 aa5.9□□□□□ -1.46
RFC1-202ENST00000381897 ZHX2Q9Y6X8 837 aa5.9□□□□□ -1.46
RFC1-202ENST00000381897 KDM3BQ7LBC6 1761 aa5.9□□□□□ -1.47
RFC1-202ENST00000381897 ZMYM2Q9UBW7 1377 aa5.9□□□□□ -1.47
RFC1-202ENST00000381897 ARHGEF35A5YM69 484 aa5.9□□□□□ -1.47
RFC1-202ENST00000381897 DDX39AO00148 427 aaKnown RBP5.9□□□□□ -1.47
RFC1-202ENST00000381897 PRODHO43272 600 aa5.9□□□□□ -1.47
RFC1-202ENST00000381897 AKAP8O43823 692 aaKnown RBP5.9□□□□□ -1.47
RFC1-202ENST00000381897 CLASP2O75122 1294 aaKnown RBP5.9□□□□□ -1.47
RFC1-202ENST00000381897 LRRN2O75325 713 aa5.9□□□□□ -1.47
RFC1-202ENST00000381897 SUPT3HO75486 399 aa5.9□□□□□ -1.47
RFC1-202ENST00000381897 KRT36O76013 467 aa5.9□□□□□ -1.47
RFC1-202ENST00000381897 RASAL1O95294 804 aa5.9□□□□□ -1.47
RFC1-202ENST00000381897 GHRHP01286 108 aa5.9□□□□□ -1.47
RFC1-202ENST00000381897 POLR2MP0CAP2 368 aa5.9□□□□□ -1.47
RFC1-202ENST00000381897 HSPA8P11142 646 aaKnown RBP5.9□□□□□ -1.47
RFC1-202ENST00000381897 HIBADHP31937 336 aaKnown RBP5.9□□□□□ -1.47
RFC1-202ENST00000381897 STT3AP46977 705 aa5.9□□□□□ -1.47
RFC1-202ENST00000381897 AFF3P51826 1226 aaKnown RBP5.9□□□□□ -1.47
RFC1-202ENST00000381897 MTA1Q13330 715 aa5.9□□□□□ -1.47
RFC1-202ENST00000381897 SBK1Q52WX2 424 aa5.9□□□□□ -1.47
RFC1-202ENST00000381897 RABGAP1LQ5R372 815 aa5.9□□□□□ -1.47
RFC1-202ENST00000381897 SLFN11Q7Z7L1 901 aa5.9□□□□□ -1.47
RFC1-202ENST00000381897 NXPE1Q8N323 547 aa5.9□□□□□ -1.47
RFC1-202ENST00000381897 PRPF18Q99633 342 aaKnown RBP5.9□□□□□ -1.47
RFC1-202ENST00000381897 SYT15Q9BQS2 421 aa5.9□□□□□ -1.47
RFC1-202ENST00000381897 CNPPD1Q9BV87 410 aa5.9□□□□□ -1.47
RFC1-202ENST00000381897 IMPG2Q9BZV3 1241 aa5.9□□□□□ -1.47
RFC1-202ENST00000381897 DENND2DQ9H6A0 471 aaPredicted RBP5.9□□□□□ -1.47
RFC1-202ENST00000381897 PLGRKTQ9HBL7 147 aa5.9□□□□□ -1.47
RFC1-202ENST00000381897 SUCOQ9UBS9 1254 aaKnown RBP5.9□□□□□ -1.47
RFC1-202ENST00000381897 SALL4Q9UJQ4 1053 aa5.9□□□□□ -1.47
RFC1-202ENST00000381897 POTEMA6NI47 508 aa5.9□□□□□ -1.47
RFC1-202ENST00000381897 ANGPT2O15123 496 aa5.9□□□□□ -1.47
RFC1-202ENST00000381897 MAGEC1O60732 1142 aa5.9□□□□□ -1.47
RFC1-202ENST00000381897 CRTAPO75718 401 aaPredicted RBP5.9□□□□□ -1.47
RFC1-202ENST00000381897 EPN2O95208 641 aa5.9□□□□□ -1.47
RFC1-202ENST00000381897 OAS1P00973 400 aaKnown RBP5.9□□□□□ -1.47
RFC1-202ENST00000381897 IFNB1P01574 187 aa5.9□□□□□ -1.47
RFC1-202ENST00000381897 TAC1P20366 129 aa5.9□□□□□ -1.47
RFC1-202ENST00000381897 HOXD10P28358 340 aa5.9□□□□□ -1.47
RFC1-202ENST00000381897 SOAT1P35610 550 aa5.9□□□□□ -1.47
RFC1-202ENST00000381897 ACADVLP49748 655 aa5.9□□□□□ -1.47
RFC1-202ENST00000381897 PRKAG1P54619 331 aa5.9□□□□□ -1.47
RFC1-202ENST00000381897 PPIDQ08752 370 aaKnown RBP5.9□□□□□ -1.47
RFC1-202ENST00000381897 TMEM132BQ14DG7 1078 aa5.9□□□□□ -1.47
RFC1-202ENST00000381897 KBTBD12Q3ZCT8 623 aa5.9□□□□□ -1.47
RFC1-202ENST00000381897 NLRP10Q86W26 655 aa5.9□□□□□ -1.47
RFC1-202ENST00000381897 RHOT1Q8IXI2 618 aa5.9□□□□□ -1.47
RFC1-202ENST00000381897 C4orf33Q8N1A6 199 aa5.9□□□□□ -1.47
RFC1-202ENST00000381897 TTC13Q8NBP0 860 aa5.9□□□□□ -1.47
RFC1-202ENST00000381897 OR6Y1Q8NGX8 325 aa5.9□□□□□ -1.47
RFC1-202ENST00000381897 KRT35Q92764 455 aa5.9□□□□□ -1.47
RFC1-202ENST00000381897 ZUFSPQ96AP4 578 aa5.9□□□□□ -1.47
RFC1-202ENST00000381897 PIGSQ96S52 555 aa5.9□□□□□ -1.47
RFC1-202ENST00000381897 TMEM120AQ9BXJ8 343 aa5.9□□□□□ -1.47
RFC1-202ENST00000381897 ACE2Q9BYF1 805 aaPredicted RBP5.9□□□□□ -1.47
RFC1-202ENST00000381897 NINJ2Q9NZG7 142 aa5.9□□□□□ -1.47
RFC1-202ENST00000381897 GNEQ9Y223 722 aaKnown RBP5.9□□□□□ -1.47
RFC1-202ENST00000381897 AKT3Q9Y243 479 aa5.9□□□□□ -1.47
RFC1-202ENST00000381897 PCDHGA3Q9Y5H0 932 aa5.9□□□□□ -1.47
RFC1-202ENST00000381897 V9GYQ6 96 aa5.9□□□□□ -1.47
RFC1-202ENST00000381897 FRMPD4Q14CM0 1322 aa5.89□□□□□ -1.47
RFC1-202ENST00000381897 EIF3DO15371 548 aaKnown RBP eCLIP5.89□□□□□ -1.475e-7■■■■□ 24.8
RFC1-202ENST00000381897 ECE2O60344 883 aa5.89□□□□□ -1.47
RFC1-202ENST00000381897 ATF7P17544 494 aaPredicted RBP5.89□□□□□ -1.47
RFC1-202ENST00000381897 SLC18A1P54219 525 aa5.89□□□□□ -1.47
RFC1-202ENST00000381897 YWHAGP61981 247 aaKnown RBP eCLIP5.89□□□□□ -1.47
RFC1-202ENST00000381897 MAMLD1Q13495 774 aa5.89□□□□□ -1.47
RFC1-202ENST00000381897 FAM160B1Q5W0V3 765 aa5.89□□□□□ -1.47
RFC1-202ENST00000381897 BRINP3Q76B58 766 aa5.89□□□□□ -1.47
RFC1-202ENST00000381897 GALNT7Q86SF2 657 aa5.89□□□□□ -1.47
RFC1-202ENST00000381897 SFR1Q86XK3 245 aa5.89□□□□□ -1.47
RFC1-202ENST00000381897 PLCZ1Q86YW0 608 aa5.89□□□□□ -1.47
RFC1-202ENST00000381897 CEP97Q8IW35 865 aa5.89□□□□□ -1.47
RFC1-202ENST00000381897 ZBED8Q8IZ13 594 aa5.89□□□□□ -1.47
RFC1-202ENST00000381897 PHC3Q8NDX5 983 aa5.89□□□□□ -1.47
RFC1-202ENST00000381897 BEST2Q8NFU1 509 aa5.89□□□□□ -1.47
RFC1-202ENST00000381897 SCFD1Q8WVM8 642 aa5.89□□□□□ -1.47
RFC1-202ENST00000381897 DACT3Q96B18 629 aaPredicted RBP5.89□□□□□ -1.47
RFC1-202ENST00000381897 DCPSQ96C86 337 aaKnown RBP5.89□□□□□ -1.47
RFC1-202ENST00000381897 MTRQ99707 1265 aa5.89□□□□□ -1.47
RFC1-202ENST00000381897 CEP44Q9C0F1 390 aa5.89□□□□□ -1.47
RFC1-202ENST00000381897 SMYD3Q9H7B4 428 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms