RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 ANHXE9PGG2 379 aa16.17■□□□□ 0.18
PDGFB-202ENST00000381551 CAPN9O14815 690 aa16.17■□□□□ 0.18
PDGFB-202ENST00000381551 MDM4O15151 490 aa16.17■□□□□ 0.18
PDGFB-202ENST00000381551 MYBL1P10243 752 aa16.17■□□□□ 0.18
PDGFB-202ENST00000381551 MBL2P11226 248 aaPredicted RBP16.17■□□□□ 0.18
PDGFB-202ENST00000381551 KRT3P12035 628 aa16.17■□□□□ 0.18
PDGFB-202ENST00000381551 FCARP24071 287 aa16.17■□□□□ 0.18
PDGFB-202ENST00000381551 NOS2P35228 1153 aa16.17■□□□□ 0.18
PDGFB-202ENST00000381551 VIPR2P41587 438 aa16.17■□□□□ 0.18
PDGFB-202ENST00000381551 RNASE9P60153 205 aaKnown RBP16.17■□□□□ 0.18
PDGFB-202ENST00000381551 ZXDBP98169 803 aa16.17■□□□□ 0.18
PDGFB-202ENST00000381551 ZP2Q05996 745 aa16.17■□□□□ 0.18
PDGFB-202ENST00000381551 EFEMP1Q12805 493 aa16.17■□□□□ 0.18
PDGFB-202ENST00000381551 MAMLD1Q13495 774 aa16.17■□□□□ 0.18
PDGFB-202ENST00000381551 MTF1Q14872 753 aa16.17■□□□□ 0.18
PDGFB-202ENST00000381551 DCAF6Q58WW2 860 aa16.17■□□□□ 0.18
PDGFB-202ENST00000381551 PPP1R15BQ5SWA1 713 aa16.17■□□□□ 0.18
PDGFB-202ENST00000381551 C10orf76Q5T2E6 689 aa16.17■□□□□ 0.18
PDGFB-202ENST00000381551 TANGO2Q6ICL3 276 aa16.17■□□□□ 0.18
PDGFB-202ENST00000381551 MSANTD2Q6P1R3 559 aa16.17■□□□□ 0.18
PDGFB-202ENST00000381551 PARM1Q6UWI2 310 aa16.17■□□□□ 0.18
PDGFB-202ENST00000381551 RAD9BQ6WBX8 426 aa16.17■□□□□ 0.18
PDGFB-202ENST00000381551 RSRC2Q7L4I2 434 aaKnown RBP16.17■□□□□ 0.18
PDGFB-202ENST00000381551 ST13P5Q8NFI4 369 aaPredicted RBP16.17■□□□□ 0.18
PDGFB-202ENST00000381551 TRIM11Q96F44 468 aa16.17■□□□□ 0.18
PDGFB-202ENST00000381551 EIF3CQ99613 913 aaKnown RBP16.17■□□□□ 0.18
PDGFB-202ENST00000381551 NACA2Q9H009 215 aa16.17■□□□□ 0.18
PDGFB-202ENST00000381551 THAP2Q9H0W7 228 aa16.17■□□□□ 0.18
PDGFB-202ENST00000381551 GKN1Q9NS71 199 aa16.17■□□□□ 0.18
PDGFB-202ENST00000381551 OLA1Q9NTK5 396 aaKnown RBP16.17■□□□□ 0.18
PDGFB-202ENST00000381551 PARVAQ9NVD7 372 aa16.17■□□□□ 0.18
PDGFB-202ENST00000381551 CNOT8Q9UFF9 292 aaKnown RBP16.17■□□□□ 0.18
PDGFB-202ENST00000381551 LIMD1Q9UGP4 676 aa16.17■□□□□ 0.18
PDGFB-202ENST00000381551 ARHGAP26Q9UNA1 814 aa16.17■□□□□ 0.18
PDGFB-202ENST00000381551 CCL26Q9Y258 94 aa16.17■□□□□ 0.18
PDGFB-202ENST00000381551 UNC80Q8N2C7 3258 aa16.16■□□□□ 0.18
PDGFB-202ENST00000381551 C19orf67A6NJJ6 358 aa16.16■□□□□ 0.18
PDGFB-202ENST00000381551 DAB1O75553 588 aa16.16■□□□□ 0.18
PDGFB-202ENST00000381551 NDUFA10O95299 355 aa16.16■□□□□ 0.18
PDGFB-202ENST00000381551 GJB6O95452 261 aa16.16■□□□□ 0.18
PDGFB-202ENST00000381551 PRAMEF12O95522 483 aa16.16■□□□□ 0.18
PDGFB-202ENST00000381551 H2AFZP0C0S5 128 aa16.16■□□□□ 0.18
PDGFB-202ENST00000381551 ABCB4P21439 1286 aa16.16■□□□□ 0.18
PDGFB-202ENST00000381551 RFC1P35251 1148 aaPredicted RBP16.16■□□□□ 0.18
PDGFB-202ENST00000381551 CYLC1P35663 651 aaPredicted RBP16.16■□□□□ 0.18
PDGFB-202ENST00000381551 MATKP42679 507 aa16.16■□□□□ 0.18
PDGFB-202ENST00000381551 GPC5P78333 572 aa16.16■□□□□ 0.18
PDGFB-202ENST00000381551 TRNP1Q6NT89 227 aa16.16■□□□□ 0.18
PDGFB-202ENST00000381551 DNAJC24Q6P3W2 148 aa16.16■□□□□ 0.18
PDGFB-202ENST00000381551 H2AFVQ71UI9 128 aa16.16■□□□□ 0.18
PDGFB-202ENST00000381551 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.16■□□□□ 0.18
PDGFB-202ENST00000381551 CELF5Q8N6W0 485 aaKnown RBP16.16■□□□□ 0.18
PDGFB-202ENST00000381551 JOSD2Q8TAC2 188 aa16.16■□□□□ 0.18
PDGFB-202ENST00000381551 FGF14Q92915 247 aa16.16■□□□□ 0.18
PDGFB-202ENST00000381551 NT5C3BQ969T7 300 aa16.16■□□□□ 0.18
PDGFB-202ENST00000381551 E2F7Q96AV8 911 aa16.16■□□□□ 0.18
PDGFB-202ENST00000381551 ZNF653Q96CK0 615 aa16.16■□□□□ 0.18
PDGFB-202ENST00000381551 RSPRY1Q96DX4 576 aa16.16■□□□□ 0.18
PDGFB-202ENST00000381551 ZFRQ96KR1 1074 aaKnown RBP16.16■□□□□ 0.18
PDGFB-202ENST00000381551 LRRC3BQ96PB8 259 aa16.16■□□□□ 0.18
PDGFB-202ENST00000381551 DDX23Q9BUQ8 820 aaKnown RBP16.16■□□□□ 0.18
PDGFB-202ENST00000381551 SELENOOQ9BVL4 669 aa16.16■□□□□ 0.18
PDGFB-202ENST00000381551 KLF16Q9BXK1 252 aaPredicted RBP16.16■□□□□ 0.18
PDGFB-202ENST00000381551 PACSIN1Q9BY11 444 aa16.16■□□□□ 0.18
PDGFB-202ENST00000381551 ZFP14Q9HCL3 533 aa16.16■□□□□ 0.18
PDGFB-202ENST00000381551 METTL5Q9NRN9 209 aaKnown RBP16.16■□□□□ 0.18
PDGFB-202ENST00000381551 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.16■□□□□ 0.18
PDGFB-202ENST00000381551 MARCH2Q9P0N8 246 aa16.16■□□□□ 0.18
PDGFB-202ENST00000381551 SFMBT1Q9UHJ3 866 aa16.16■□□□□ 0.18
PDGFB-202ENST00000381551 CPQQ9Y646 472 aa16.16■□□□□ 0.18
PDGFB-202ENST00000381551 C2CD4BA6NLJ0 364 aa16.15■□□□□ 0.18
PDGFB-202ENST00000381551 ATMINO43313 823 aaPredicted RBP16.15■□□□□ 0.18
PDGFB-202ENST00000381551 ECI2O75521 394 aa16.15■□□□□ 0.18
PDGFB-202ENST00000381551 CYP1A2P05177 515 aa16.15■□□□□ 0.18
PDGFB-202ENST00000381551 TCF3P15923 654 aa16.15■□□□□ 0.18
PDGFB-202ENST00000381551 FLT3P36888 993 aa16.15■□□□□ 0.18
PDGFB-202ENST00000381551 MAGEA1P43355 309 aa16.15■□□□□ 0.18
PDGFB-202ENST00000381551 RPL7AP62424 266 aaKnown RBP16.15■□□□□ 0.18
PDGFB-202ENST00000381551 HTR4Q13639 388 aa16.15■□□□□ 0.18
PDGFB-202ENST00000381551 SPA17Q15506 151 aa16.15■□□□□ 0.18
PDGFB-202ENST00000381551 MTSS1LQ765P7 747 aa16.15■□□□□ 0.18
PDGFB-202ENST00000381551 MIB1Q86YT6 1006 aa16.15■□□□□ 0.18
PDGFB-202ENST00000381551 EMC1Q8N766 993 aa16.15■□□□□ 0.18
PDGFB-202ENST00000381551 ADAMTS19Q8TE59 1207 aa16.15■□□□□ 0.18
PDGFB-202ENST00000381551 DQX1Q8TE96 717 aaKnown RBP16.15■□□□□ 0.18
PDGFB-202ENST00000381551 ELSPBP1Q96BH3 223 aa16.15■□□□□ 0.18
PDGFB-202ENST00000381551 NPY6RQ99463 290 aa16.15■□□□□ 0.18
PDGFB-202ENST00000381551 RPP25Q9BUL9 199 aaKnown RBP16.15■□□□□ 0.18
PDGFB-202ENST00000381551 PLA2G2FQ9BZM2 168 aa16.15■□□□□ 0.18
PDGFB-202ENST00000381551 SMOC2Q9H3U7 446 aa16.15■□□□□ 0.18
PDGFB-202ENST00000381551 SMPD4Q9NXE4 827 aa16.15■□□□□ 0.18
PDGFB-202ENST00000381551 OBP2AQ9NY56 170 aa16.15■□□□□ 0.18
PDGFB-202ENST00000381551 MYO1AQ9UBC5 1043 aa16.15■□□□□ 0.18
PDGFB-202ENST00000381551 RASAL2Q9UJF2 1139 aa16.15■□□□□ 0.18
PDGFB-202ENST00000381551 PCDHA13Q9Y5I0 950 aa16.15■□□□□ 0.18
PDGFB-202ENST00000381551 TMEM191CA6NGB0 347 aa16.14■□□□□ 0.17
PDGFB-202ENST00000381551 LEFTY2O00292 366 aa16.14■□□□□ 0.17
PDGFB-202ENST00000381551 TRUB2O95900 331 aaKnown RBP16.14■□□□□ 0.17
PDGFB-202ENST00000381551 IGLV3-25P01717 112 aa16.14■□□□□ 0.17
PDGFB-202ENST00000381551 TMEM253P0C7T8 217 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms