RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 OR6J1Q8NGC5 347 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 PGBD4Q96DM1 585 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 CNDP2Q96KP4 475 aaKnown RBP5.03□□□□□ -1.6
PTPRD-203ENST00000381196 PCDHB4Q9Y5E5 795 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 RIC1Q4ADV7 1423 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 PRMT5O14744 637 aaPredicted RBP5.03□□□□□ -1.6
PTPRD-203ENST00000381196 PMM2O15305 246 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 ST3GAL1Q11201 340 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 MKRN4PQ13434 485 aaPredicted RBP5.03□□□□□ -1.6
PTPRD-203ENST00000381196 PDK2Q15119 407 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 EZH2Q15910 746 aaKnown RBP5.03□□□□□ -1.6
PTPRD-203ENST00000381196 KCNV1Q6PIU1 500 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 CKAP2Q8WWK9 683 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 FAM111AQ96PZ2 611 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 CHCHD6Q9BRQ6 235 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 SLC25A23Q9BV35 468 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 PCDH9Q9HC56 1237 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 IARS2Q9NSE4 1012 aaKnown RBP5.03□□□□□ -1.6
PTPRD-203ENST00000381196 RRN3Q9NYV6 651 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 PEX16Q9Y5Y5 336 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 RNF103O00237 685 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 TSC22D2O75157 780 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 CYBBP04839 570 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 PDHA1P08559 390 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 RORAP35398 523 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 SCARF1Q14162 830 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 TMEM44Q2T9K0 475 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 ANKRD42Q8N9B4 389 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 PNKPQ96T60 521 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 LSM7Q9UK45 103 aaKnown RBP5.03□□□□□ -1.6
PTPRD-203ENST00000381196 KRT87PA6NCN2 255 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 ZBTB22O15209 634 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 HUS1O60921 280 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 TULP3O75386 442 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 IFNA16P05015 189 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 MPOP05164 745 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 EEF1B2P24534 225 aaKnown RBP5.02□□□□□ -1.61
PTPRD-203ENST00000381196 OSTNP61366 133 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 YWHAGP61981 247 aaKnown RBP eCLIP5.02□□□□□ -1.61
PTPRD-203ENST00000381196 S100A12P80511 92 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 DNAJC24Q6P3W2 148 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 FLCNQ8NFG4 579 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 RAD54LQ92698 747 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 MYDGFQ969H8 173 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 PHF21AQ96BD5 680 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 PGBD1Q96JS3 809 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 SCYL1Q96KG9 808 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 B3GALT6Q96L58 329 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 PI4K2BG5E9Z4 385 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 SNAP23O00161 211 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 TRMUO75648 421 aaKnown RBP5.02□□□□□ -1.61
PTPRD-203ENST00000381196 ITGB3P05106 788 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 SARSP49591 514 aaKnown RBP5.02□□□□□ -1.61
PTPRD-203ENST00000381196 OTUD4Q01804 1114 aaKnown RBP5.02□□□□□ -1.61
PTPRD-203ENST00000381196 ARHGAP15Q53QZ3 475 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 SUSD4Q5VX71 490 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 Q96MT0 163 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 PLEKHG4BQ96PX9 1271 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 PIGSQ96S52 555 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 PRMT1Q99873 361 aaKnown RBP5.02□□□□□ -1.61
PTPRD-203ENST00000381196 KLHL1Q9NR64 748 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 KRT84Q9NSB2 600 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 DRG1Q9Y295 367 aaKnown RBP5.02□□□□□ -1.61
PTPRD-203ENST00000381196 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.02□□□□□ -1.61
PTPRD-203ENST00000381196 GRXCR2A6NFK2 248 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 PRR23D1E9PI22 279 aaPredicted RBP5.02□□□□□ -1.61
PTPRD-203ENST00000381196 PDPK1O15530 556 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 RGS20O76081 388 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 UPP2O95045 317 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 VAPBO95292 243 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 STAG3L1P0CL83 205 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 PRR23D2P0DMB1 279 aaPredicted RBP5.02□□□□□ -1.61
PTPRD-203ENST00000381196 TCF3P15923 654 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 ERCC2P18074 760 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 PAX7P23759 505 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 PIK3CGP48736 1102 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 CCT8P50990 548 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 ANXA11P50995 505 aaKnown RBP5.02□□□□□ -1.61
PTPRD-203ENST00000381196 ECT2LQ008S8 904 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 FOXM1Q08050 763 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 GRM4Q14833 912 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 RABGAP1LQ5R372 815 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 TTBK2Q6IQ55 1244 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 STYK1Q6J9G0 422 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 LPCAT2Q7L5N7 544 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 ERICH1Q86X53 443 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 TLCD1Q96CP7 247 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 OXNAD1Q96HP4 312 aaPredicted RBP5.02□□□□□ -1.61
PTPRD-203ENST00000381196 RTKNQ9BST9 563 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 UBE2OQ9C0C9 1292 aaKnown RBP5.02□□□□□ -1.61
PTPRD-203ENST00000381196 CCDC177Q9NQR7 707 aaPredicted RBP5.02□□□□□ -1.61
PTPRD-203ENST00000381196 ING3Q9NXR8 418 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 MSRAQ9UJ68 235 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 ING4Q9UNL4 249 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 LRRC53A6NM62 1247 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 C19orf81C9J6K1 198 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 OPLAHO14841 1288 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 IFNB1P01574 187 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 ALBP02768 609 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 CCNA2P20248 432 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms