RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 ERBB2P04626 1255 aa20.29■□□□□ 0.84
GTF3A-201ENST00000381140 FERP16591 822 aa20.29■□□□□ 0.84
GTF3A-201ENST00000381140 CHRNB2P17787 502 aa20.29■□□□□ 0.84
GTF3A-201ENST00000381140 RUNX3Q13761 415 aa20.29■□□□□ 0.84
GTF3A-201ENST00000381140 ASIC2Q16515 512 aa20.29■□□□□ 0.84
GTF3A-201ENST00000381140 PTPN20Q4JDL3 420 aa20.29■□□□□ 0.84
GTF3A-201ENST00000381140 OR6B2Q6IFH4 312 aa20.29■□□□□ 0.84
GTF3A-201ENST00000381140 KLHDC10Q6PID8 442 aa20.29■□□□□ 0.84
GTF3A-201ENST00000381140 ZNF677Q86XU0 584 aa20.29■□□□□ 0.84
GTF3A-201ENST00000381140 SUGP1Q8IWZ8 645 aaKnown RBP20.29■□□□□ 0.84
GTF3A-201ENST00000381140 CPLX3Q8WVH0 158 aa20.29■□□□□ 0.84
GTF3A-201ENST00000381140 CPA5Q8WXQ8 436 aa20.29■□□□□ 0.84
GTF3A-201ENST00000381140 FOXQ1Q9C009 403 aa20.29■□□□□ 0.84
GTF3A-201ENST00000381140 OLA1Q9NTK5 396 aaKnown RBP20.29■□□□□ 0.84
GTF3A-201ENST00000381140 SFMBT1Q9UHJ3 866 aa20.29■□□□□ 0.84
GTF3A-201ENST00000381140 ZDBF2Q9HCK1 2354 aa20.29■□□□□ 0.84
GTF3A-201ENST00000381140 E2F8A0AVK6 867 aa20.28■□□□□ 0.84
GTF3A-201ENST00000381140 SART1O43290 800 aaKnown RBP20.28■□□□□ 0.84
GTF3A-201ENST00000381140 PBX1P40424 430 aa20.28■□□□□ 0.84
GTF3A-201ENST00000381140 FMO1Q01740 532 aa20.28■□□□□ 0.84
GTF3A-201ENST00000381140 PRKCQQ04759 706 aa20.28■□□□□ 0.84
GTF3A-201ENST00000381140 UBXN2BQ14CS0 331 aa20.28■□□□□ 0.84
GTF3A-201ENST00000381140 EML3Q32P44 896 aa20.28■□□□□ 0.84
GTF3A-201ENST00000381140 FAM183BPQ6ZVS7 135 aa20.28■□□□□ 0.84
GTF3A-201ENST00000381140 VSTM4Q8IW00 320 aa20.28■□□□□ 0.84
GTF3A-201ENST00000381140 CPA6Q8N4T0 437 aa20.28■□□□□ 0.84
GTF3A-201ENST00000381140 FBXL6Q8N531 539 aa20.28■□□□□ 0.84
GTF3A-201ENST00000381140 ZNF276Q8N554 614 aa20.28■□□□□ 0.84
GTF3A-201ENST00000381140 ATP2A3Q93084 1043 aa20.28■□□□□ 0.84
GTF3A-201ENST00000381140 PIWIL1Q96J94 861 aaKnown RBP20.28■□□□□ 0.84
GTF3A-201ENST00000381140 TRPV5Q9NQA5 729 aa20.28■□□□□ 0.84
GTF3A-201ENST00000381140 LSM7Q9UK45 103 aaKnown RBP20.28■□□□□ 0.84
GTF3A-201ENST00000381140 KMT2EQ8IZD2 1858 aa20.28■□□□□ 0.84
GTF3A-201ENST00000381140 ATG2BQ96BY7 2078 aa20.28■□□□□ 0.84
GTF3A-201ENST00000381140 SLC9A3R1O14745 358 aaPredicted RBP20.27■□□□□ 0.84
GTF3A-201ENST00000381140 LSM8O95777 96 aaKnown RBP20.27■□□□□ 0.84
GTF3A-201ENST00000381140 CCDC172P0C7W6 258 aa20.27■□□□□ 0.84
GTF3A-201ENST00000381140 NCAM1P13591 858 aa20.27■□□□□ 0.84
GTF3A-201ENST00000381140 CDH5P33151 784 aaPredicted RBP20.27■□□□□ 0.84
GTF3A-201ENST00000381140 SNX16P57768 344 aa20.27■□□□□ 0.84
GTF3A-201ENST00000381140 C2CD6Q53TS8 623 aa20.27■□□□□ 0.84
GTF3A-201ENST00000381140 SFMBT2Q5VUG0 894 aa20.27■□□□□ 0.84
GTF3A-201ENST00000381140 BMP8AQ7Z5Y6 402 aa20.27■□□□□ 0.84
GTF3A-201ENST00000381140 ERICH1Q86X53 443 aa20.27■□□□□ 0.84
GTF3A-201ENST00000381140 FMNL3Q8IVF7 1028 aa20.27■□□□□ 0.84
GTF3A-201ENST00000381140 BBS7Q8IWZ6 715 aa20.27■□□□□ 0.84
GTF3A-201ENST00000381140 NUP58Q9BVL2 599 aa20.27■□□□□ 0.84
GTF3A-201ENST00000381140 NDRG2Q9UN36 371 aaKnown RBP20.27■□□□□ 0.84
GTF3A-201ENST00000381140 NAALADL1Q9UQQ1 740 aa20.27■□□□□ 0.84
GTF3A-201ENST00000381140 OTOL1A6NHN0 477 aaPredicted RBP20.26■□□□□ 0.83
GTF3A-201ENST00000381140 CAPN9O14815 690 aa20.26■□□□□ 0.83
GTF3A-201ENST00000381140 MSI1O43347 362 aaKnown RBP20.26■□□□□ 0.83
GTF3A-201ENST00000381140 GRAP2O75791 330 aa20.26■□□□□ 0.83
GTF3A-201ENST00000381140 STC2O76061 302 aa20.26■□□□□ 0.83
GTF3A-201ENST00000381140 STARD6P59095 220 aa20.26■□□□□ 0.83
GTF3A-201ENST00000381140 NOMO3P69849 1222 aa20.26■□□□□ 0.83
GTF3A-201ENST00000381140 COG7P83436 770 aa20.26■□□□□ 0.83
GTF3A-201ENST00000381140 TAF5Q15542 800 aa20.26■□□□□ 0.83
GTF3A-201ENST00000381140 CWF19L1Q69YN2 538 aaKnown RBP20.26■□□□□ 0.83
GTF3A-201ENST00000381140 MSANTD4Q8NCY6 345 aa20.26■□□□□ 0.83
GTF3A-201ENST00000381140 AGPAT1Q99943 283 aa20.26■□□□□ 0.83
GTF3A-201ENST00000381140 TTYH3Q9C0H2 523 aa20.26■□□□□ 0.83
GTF3A-201ENST00000381140 ECT2Q9H8V3 914 aa20.26■□□□□ 0.83
GTF3A-201ENST00000381140 TBC1D14Q9P2M4 693 aa20.26■□□□□ 0.83
GTF3A-201ENST00000381140 IMPACTQ9P2X3 320 aa20.26■□□□□ 0.83
GTF3A-201ENST00000381140 MYO6Q9UM54 1294 aa20.26■□□□□ 0.83
GTF3A-201ENST00000381140 KANSL1LA0AUZ9 987 aa20.25■□□□□ 0.83
GTF3A-201ENST00000381140 GOLGA6L6A8MZA4 724 aa20.25■□□□□ 0.83
GTF3A-201ENST00000381140 SPECC1L-ADORA2AF8WAN1 911 aa20.25■□□□□ 0.83
GTF3A-201ENST00000381140 NFATC1O95644 943 aa20.25■□□□□ 0.83
GTF3A-201ENST00000381140 CTHP32929 405 aa20.25■□□□□ 0.83
GTF3A-201ENST00000381140 VCPP55072 806 aaKnown RBP20.25■□□□□ 0.83
GTF3A-201ENST00000381140 ZNF852Q6ZMS4 543 aa20.25■□□□□ 0.83
GTF3A-201ENST00000381140 TRIM72Q6ZMU5 477 aa20.25■□□□□ 0.83
GTF3A-201ENST00000381140 DRC7Q8IY82 874 aa20.25■□□□□ 0.83
GTF3A-201ENST00000381140 SLC30A5Q8TAD4 765 aa20.25■□□□□ 0.83
GTF3A-201ENST00000381140 FAM3CQ92520 227 aa20.25■□□□□ 0.83
GTF3A-201ENST00000381140 C18orf8Q96DM3 657 aa20.25■□□□□ 0.83
GTF3A-201ENST00000381140 PCDHB18PQ96TA0 734 aa20.25■□□□□ 0.83
GTF3A-201ENST00000381140 C8orf33Q9H7E9 229 aaPredicted RBP20.25■□□□□ 0.83
GTF3A-201ENST00000381140 ITIH6Q6UXX5 1313 aa20.25■□□□□ 0.83
GTF3A-201ENST00000381140 GOLGA8SH3BPF8 625 aa20.24■□□□□ 0.83
GTF3A-201ENST00000381140 MAN2B1O00754 1011 aa20.24■□□□□ 0.83
GTF3A-201ENST00000381140 FYNP06241 537 aa20.24■□□□□ 0.83
GTF3A-201ENST00000381140 CORO1AP31146 461 aaKnown RBP20.24■□□□□ 0.83
GTF3A-201ENST00000381140 YWHAZP63104 245 aaKnown RBP20.24■□□□□ 0.83
GTF3A-201ENST00000381140 NR1H3Q13133 447 aa20.24■□□□□ 0.83
GTF3A-201ENST00000381140 FIGNQ5HY92 759 aa20.24■□□□□ 0.83
GTF3A-201ENST00000381140 EFHC1Q5JVL4 640 aa20.24■□□□□ 0.83
GTF3A-201ENST00000381140 SYPL2Q5VXT5 272 aa20.24■□□□□ 0.83
GTF3A-201ENST00000381140 E4F1Q66K89 784 aaPredicted RBP20.24■□□□□ 0.83
GTF3A-201ENST00000381140 ASTLQ6HA08 431 aaPredicted RBP20.24■□□□□ 0.83
GTF3A-201ENST00000381140 MSANTD2Q6P1R3 559 aa20.24■□□□□ 0.83
GTF3A-201ENST00000381140 MMS22LQ6ZRQ5 1243 aa20.24■□□□□ 0.83
GTF3A-201ENST00000381140 TOGARAM2Q6ZUX3 1019 aa20.24■□□□□ 0.83
GTF3A-201ENST00000381140 IRF2BP2Q7Z5L9 587 aa20.24■□□□□ 0.83
GTF3A-201ENST00000381140 PHLDB2Q86SQ0 1253 aa20.24■□□□□ 0.83
GTF3A-201ENST00000381140 RALGPS2Q86X27 583 aaPredicted RBP20.24■□□□□ 0.83
GTF3A-201ENST00000381140 SPC24Q8NBT2 197 aa20.24■□□□□ 0.83
GTF3A-201ENST00000381140 ADAM32Q8TC27 787 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms