RNA–Protein interactions for RNA: ENST00000380850.8

TTC39B-202, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-202ENST00000380850 GIMAP7Q8NHV1 300 aa13.17□□□□□ -0.3
TTC39B-202ENST00000380850 SGF29Q96ES7 293 aa13.17□□□□□ -0.3
TTC39B-202ENST00000380850 RNF157Q96PX1 679 aa13.17□□□□□ -0.3
TTC39B-202ENST00000380850 TINF2Q9BSI4 451 aa13.17□□□□□ -0.3
TTC39B-202ENST00000380850 ROPN1BQ9BZX4 212 aaPredicted RBP13.17□□□□□ -0.3
TTC39B-202ENST00000380850 ROPN1Q9HAT0 212 aaPredicted RBP13.17□□□□□ -0.3
TTC39B-202ENST00000380850 SLC5A4Q9NY91 659 aa13.17□□□□□ -0.3
TTC39B-202ENST00000380850 DDX56Q9NY93 547 aaKnown RBP13.17□□□□□ -0.3
TTC39B-202ENST00000380850 PPARGC1AQ9UBK2 798 aaKnown RBP13.17□□□□□ -0.3
TTC39B-202ENST00000380850 C2CD4BA6NLJ0 364 aa13.17□□□□□ -0.3
TTC39B-202ENST00000380850 CXCL11O14625 94 aa13.17□□□□□ -0.3
TTC39B-202ENST00000380850 PMM2O15305 246 aa13.17□□□□□ -0.3
TTC39B-202ENST00000380850 HUS1O60921 280 aa13.17□□□□□ -0.3
TTC39B-202ENST00000380850 AMHP03971 560 aa13.17□□□□□ -0.3
TTC39B-202ENST00000380850 ENO1P06733 434 aaKnown RBP13.17□□□□□ -0.3
TTC39B-202ENST00000380850 MMP3P08254 477 aa13.17□□□□□ -0.3
TTC39B-202ENST00000380850 HMBSP08397 361 aa13.17□□□□□ -0.3
TTC39B-202ENST00000380850 MGAT1P26572 445 aa13.17□□□□□ -0.3
TTC39B-202ENST00000380850 HOXA11P31270 313 aaPredicted RBP13.17□□□□□ -0.3
TTC39B-202ENST00000380850 BRCC3P46736 316 aa13.17□□□□□ -0.3
TTC39B-202ENST00000380850 GLRBP48167 497 aa13.17□□□□□ -0.3
TTC39B-202ENST00000380850 PDE1BQ01064 536 aa13.17□□□□□ -0.3
TTC39B-202ENST00000380850 NR1H3Q13133 447 aa13.17□□□□□ -0.3
TTC39B-202ENST00000380850 TAF1CQ15572 869 aaPredicted RBP13.17□□□□□ -0.3
TTC39B-202ENST00000380850 PLEKHG4Q58EX7 1191 aa13.17□□□□□ -0.3
TTC39B-202ENST00000380850 CDCA2Q69YH5 1023 aaPredicted RBP13.17□□□□□ -0.3
TTC39B-202ENST00000380850 SIX6OS1Q8N1H7 587 aa13.17□□□□□ -0.3
TTC39B-202ENST00000380850 BBOF1Q8ND07 529 aa13.17□□□□□ -0.3
TTC39B-202ENST00000380850 VCPIP1Q96JH7 1222 aa13.17□□□□□ -0.3
TTC39B-202ENST00000380850 CLPTM1LQ96KA5 538 aa13.17□□□□□ -0.3
TTC39B-202ENST00000380850 CAB39LQ9H9S4 337 aa13.17□□□□□ -0.3
TTC39B-202ENST00000380850 KCNG1Q9UIX4 513 aa13.17□□□□□ -0.3
TTC39B-202ENST00000380850 CHKBQ9Y259 395 aa13.17□□□□□ -0.3
TTC39B-202ENST00000380850 ATAD5Q96QE3 1844 aa13.16□□□□□ -0.3
TTC39B-202ENST00000380850 LOC100653049A0A140TA62 436 aa13.16□□□□□ -0.3
TTC39B-202ENST00000380850 SMIM28A0A1B0GU29 152 aa13.16□□□□□ -0.3
TTC39B-202ENST00000380850 FAM72CH0Y354 149 aa13.16□□□□□ -0.3
TTC39B-202ENST00000380850 KRT34O76011 436 aa13.16□□□□□ -0.3
TTC39B-202ENST00000380850 PDHA1P08559 390 aa13.16□□□□□ -0.3
TTC39B-202ENST00000380850 CSH1P0DML2 217 aa13.16□□□□□ -0.3
TTC39B-202ENST00000380850 CSH2P0DML3 217 aa13.16□□□□□ -0.3
TTC39B-202ENST00000380850 NCAM1P13591 858 aa13.16□□□□□ -0.3
TTC39B-202ENST00000380850 PHBP35232 272 aa13.16□□□□□ -0.3
TTC39B-202ENST00000380850 MORF4L2Q15014 288 aa13.16□□□□□ -0.3
TTC39B-202ENST00000380850 DGKDQ16760 1214 aa13.16□□□□□ -0.3
TTC39B-202ENST00000380850 FAM72AQ5TYM5 149 aa13.16□□□□□ -0.3
TTC39B-202ENST00000380850 HEATR6Q6AI08 1181 aaKnown RBP13.16□□□□□ -0.3
TTC39B-202ENST00000380850 FAM72DQ6L9T8 149 aa13.16□□□□□ -0.3
TTC39B-202ENST00000380850 DSTYKQ6XUX3 929 aa13.16□□□□□ -0.3
TTC39B-202ENST00000380850 NLRP9Q7RTR0 991 aa13.16□□□□□ -0.3
TTC39B-202ENST00000380850 PIGWQ7Z7B1 504 aa13.16□□□□□ -0.3
TTC39B-202ENST00000380850 OSTM1Q86WC4 334 aa13.16□□□□□ -0.3
TTC39B-202ENST00000380850 FAM72BQ86X60 149 aa13.16□□□□□ -0.3
TTC39B-202ENST00000380850 SCN4BQ8IWT1 228 aa13.16□□□□□ -0.3
TTC39B-202ENST00000380850 TNS4Q8IZW8 715 aa13.16□□□□□ -0.3
TTC39B-202ENST00000380850 EIF1ADQ8N9N8 165 aaKnown RBP13.16□□□□□ -0.3
TTC39B-202ENST00000380850 N4BP2L2Q92802 583 aaPredicted RBP13.16□□□□□ -0.3
TTC39B-202ENST00000380850 CCDC124Q96CT7 223 aaKnown RBP13.16□□□□□ -0.3
TTC39B-202ENST00000380850 NCAPGQ9BPX3 1015 aa13.16□□□□□ -0.3
TTC39B-202ENST00000380850 CYP4F11Q9HBI6 524 aa13.16□□□□□ -0.3
TTC39B-202ENST00000380850 KLHL8Q9P2G9 620 aaPredicted RBP13.16□□□□□ -0.3
TTC39B-202ENST00000380850 CDH23Q9H251 3354 aa13.16□□□□□ -0.3
TTC39B-202ENST00000380850 LSM8O95777 96 aaKnown RBP13.16□□□□□ -0.3
TTC39B-202ENST00000380850 GHRP10912 638 aa13.16□□□□□ -0.3
TTC39B-202ENST00000380850 SCNN1GP51170 649 aa13.16□□□□□ -0.3
TTC39B-202ENST00000380850 ZNF143P52747 638 aaPredicted RBP13.16□□□□□ -0.3
TTC39B-202ENST00000380850 PPIL2Q13356 520 aa13.16□□□□□ -0.3
TTC39B-202ENST00000380850 SURF1Q15526 300 aa13.16□□□□□ -0.3
TTC39B-202ENST00000380850 DLG2Q15700 870 aa13.16□□□□□ -0.3
TTC39B-202ENST00000380850 CHI3L2Q15782 390 aa13.16□□□□□ -0.3
TTC39B-202ENST00000380850 FBXO47Q5MNV8 452 aa13.16□□□□□ -0.3
TTC39B-202ENST00000380850 PPP1R15BQ5SWA1 713 aa13.16□□□□□ -0.3
TTC39B-202ENST00000380850 NOL9Q5SY16 702 aaKnown RBP13.16□□□□□ -0.3
TTC39B-202ENST00000380850 PQLC3Q8N755 202 aa13.16□□□□□ -0.3
TTC39B-202ENST00000380850 BEST2Q8NFU1 509 aa13.16□□□□□ -0.3
TTC39B-202ENST00000380850 EMID1Q96A84 441 aaPredicted RBP13.16□□□□□ -0.3
TTC39B-202ENST00000380850 MAML3Q96JK9 1138 aa13.16□□□□□ -0.3
TTC39B-202ENST00000380850 ZFP69BQ9UJL9 534 aa13.16□□□□□ -0.3
TTC39B-202ENST00000380850 C5orf42Q9H799 3197 aa13.16□□□□□ -0.3
TTC39B-202ENST00000380850 EME2A4GXA9 379 aaPredicted RBP13.15□□□□□ -0.3
TTC39B-202ENST00000380850 CCL22O00626 93 aa13.15□□□□□ -0.3
TTC39B-202ENST00000380850 MFSD11O43934 449 aa13.15□□□□□ -0.3
TTC39B-202ENST00000380850 PSMB4P28070 264 aa13.15□□□□□ -0.3
TTC39B-202ENST00000380850 CACNA2D1P54289 1103 aa13.15□□□□□ -0.3
TTC39B-202ENST00000380850 COPS2P61201 443 aa13.15□□□□□ -0.3
TTC39B-202ENST00000380850 TRIM32Q13049 653 aa13.15□□□□□ -0.3
TTC39B-202ENST00000380850 RFWD3Q6PCD5 774 aa13.15□□□□□ -0.3
TTC39B-202ENST00000380850 LONP2Q86WA8 852 aa13.15□□□□□ -0.3
TTC39B-202ENST00000380850 MAP7D3Q8IWC1 876 aa13.15□□□□□ -0.3
TTC39B-202ENST00000380850 APPL2Q8NEU8 664 aa13.15□□□□□ -0.3
TTC39B-202ENST00000380850 MROH8Q9H579 483 aa13.15□□□□□ -0.3
TTC39B-202ENST00000380850 KRT82Q9NSB4 513 aa13.15□□□□□ -0.3
TTC39B-202ENST00000380850 RBBP6Q7Z6E9 1792 aaKnown RBP13.15□□□□□ -0.3
TTC39B-202ENST00000380850 LOC102724159A0A0B4J2E5 919 aa13.15□□□□□ -0.3
TTC39B-202ENST00000380850 TCRBV5S1A1TA0A578 114 aa13.15□□□□□ -0.3
TTC39B-202ENST00000380850 MYBPHLA2RUH7 354 aa13.15□□□□□ -0.3
TTC39B-202ENST00000380850 KPNA7A9QM74 516 aa13.15□□□□□ -0.3
TTC39B-202ENST00000380850 APOC4-APOC2K7ER74 178 aa13.15□□□□□ -0.3
TTC39B-202ENST00000380850 IL18RAPO95256 599 aa13.15□□□□□ -0.3
TTC39B-202ENST00000380850 ATP6V1G2O95670 118 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms