RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 TUSC3Q13454 348 aa20.01■□□□□ 0.79
GMDS-201ENST00000380805 PKN2Q16513 984 aaKnown RBP20.01■□□□□ 0.79
GMDS-201ENST00000380805 ANKRD22Q5VYY1 191 aa20.01■□□□□ 0.79
GMDS-201ENST00000380805 DARS2Q6PI48 645 aaKnown RBP20.01■□□□□ 0.79
GMDS-201ENST00000380805 FOXR1Q6PIV2 292 aa20.01■□□□□ 0.79
GMDS-201ENST00000380805 EXOC3L1Q86VI1 746 aa20.01■□□□□ 0.79
GMDS-201ENST00000380805 PCED1BQ96HM7 432 aa20.01■□□□□ 0.79
GMDS-201ENST00000380805 ZMYND15Q9H091 742 aa20.01■□□□□ 0.79
GMDS-201ENST00000380805 LRRC4Q9HBW1 653 aa20.01■□□□□ 0.79
GMDS-201ENST00000380805 CSNK1G1Q9HCP0 422 aa20.01■□□□□ 0.79
GMDS-201ENST00000380805 CNGB3Q9NQW8 809 aa20.01■□□□□ 0.79
GMDS-201ENST00000380805 TRMT13Q9NUP7 481 aaKnown RBP20.01■□□□□ 0.79
GMDS-201ENST00000380805 ZMYND8Q9ULU4 1186 aaPredicted RBP20.01■□□□□ 0.79
GMDS-201ENST00000380805 CASTOR2A6NHX0 329 aa20■□□□□ 0.79
GMDS-201ENST00000380805 FAM107AO95990 144 aa20■□□□□ 0.79
GMDS-201ENST00000380805 TSHRP16473 764 aa20■□□□□ 0.79
GMDS-201ENST00000380805 MAGEA6P43360 314 aa20■□□□□ 0.79
GMDS-201ENST00000380805 NR2C2P49116 596 aa20■□□□□ 0.79
GMDS-201ENST00000380805 ATXN1P54253 815 aaKnown RBP20■□□□□ 0.79
GMDS-201ENST00000380805 TRAF7Q6Q0C0 670 aa20■□□□□ 0.79
GMDS-201ENST00000380805 SIX6OS1Q8N1H7 587 aa20■□□□□ 0.79
GMDS-201ENST00000380805 CCDC185Q8N715 623 aa20■□□□□ 0.79
GMDS-201ENST00000380805 ZMIZ2Q8NF64 920 aa20■□□□□ 0.79
GMDS-201ENST00000380805 SMOQ99835 787 aa20■□□□□ 0.79
GMDS-201ENST00000380805 ADAM2Q99965 735 aa20■□□□□ 0.79
GMDS-201ENST00000380805 RTP3Q9BQQ7 232 aa20■□□□□ 0.79
GMDS-201ENST00000380805 PAAF1Q9BRP4 392 aa20■□□□□ 0.79
GMDS-201ENST00000380805 TSEN34Q9BSV6 310 aaKnown RBP20■□□□□ 0.79
GMDS-201ENST00000380805 CCDC134Q9H6E4 229 aa20■□□□□ 0.79
GMDS-201ENST00000380805 FETUBQ9UGM5 382 aa20■□□□□ 0.79
GMDS-201ENST00000380805 FZD10Q9ULW2 581 aa20■□□□□ 0.79
GMDS-201ENST00000380805 STAP1Q9ULZ2 295 aa20■□□□□ 0.79
GMDS-201ENST00000380805 ACTL7BQ9Y614 415 aa20■□□□□ 0.79
GMDS-201ENST00000380805 MYBPHLA2RUH7 354 aa19.99■□□□□ 0.79
GMDS-201ENST00000380805 E7EVH7 732 aa19.99■□□□□ 0.79
GMDS-201ENST00000380805 TMEM63AO94886 807 aa19.99■□□□□ 0.79
GMDS-201ENST00000380805 ARL4CP56559 192 aa19.99■□□□□ 0.79
GMDS-201ENST00000380805 KCNJ11Q14654 390 aa19.99■□□□□ 0.79
GMDS-201ENST00000380805 FASTKD3Q14CZ7 662 aaKnown RBP19.99■□□□□ 0.79
GMDS-201ENST00000380805 MTFR1Q15390 333 aa19.99■□□□□ 0.79
GMDS-201ENST00000380805 FAM171BQ6P995 826 aa19.99■□□□□ 0.79
GMDS-201ENST00000380805 C4orf22Q6V702 233 aa19.99■□□□□ 0.79
GMDS-201ENST00000380805 NLRP14Q86W24 1093 aa19.99■□□□□ 0.79
GMDS-201ENST00000380805 ECHDC2Q86YB7 292 aa19.99■□□□□ 0.79
GMDS-201ENST00000380805 SLC43A3Q8NBI5 491 aa19.99■□□□□ 0.79
GMDS-201ENST00000380805 CSPG4P5Q96PW8 444 aa19.99■□□□□ 0.79
GMDS-201ENST00000380805 KCTD15Q96SI1 283 aaPredicted RBP19.99■□□□□ 0.79
GMDS-201ENST00000380805 SLC9A7Q96T83 725 aa19.99■□□□□ 0.79
GMDS-201ENST00000380805 PKMYT1Q99640 499 aa19.99■□□□□ 0.79
GMDS-201ENST00000380805 ACBD6Q9BR61 282 aa19.99■□□□□ 0.79
GMDS-201ENST00000380805 MED10Q9BTT4 135 aa19.99■□□□□ 0.79
GMDS-201ENST00000380805 MCOLN1Q9GZU1 580 aa19.99■□□□□ 0.79
GMDS-201ENST00000380805 DHX35Q9H5Z1 703 aaKnown RBP19.99■□□□□ 0.79
GMDS-201ENST00000380805 POPDC2Q9HBU9 364 aa19.99■□□□□ 0.79
GMDS-201ENST00000380805 PAK5Q9P286 719 aa19.99■□□□□ 0.79
GMDS-201ENST00000380805 DSEQ9UL01 958 aa19.99■□□□□ 0.79
GMDS-201ENST00000380805 HHLA1C9JL84 531 aa19.99■□□□□ 0.79
GMDS-201ENST00000380805 CHADO15335 359 aa19.99■□□□□ 0.79
GMDS-201ENST00000380805 SULT1E1P49888 294 aa19.99■□□□□ 0.79
GMDS-201ENST00000380805 TKTL1P51854 596 aa19.99■□□□□ 0.79
GMDS-201ENST00000380805 AIF1P55008 147 aa19.99■□□□□ 0.79
GMDS-201ENST00000380805 MAP3K7CLP57077 242 aa19.99■□□□□ 0.79
GMDS-201ENST00000380805 DAOAP59103 153 aa19.99■□□□□ 0.79
GMDS-201ENST00000380805 C1orf228Q6PIY5 440 aa19.99■□□□□ 0.79
GMDS-201ENST00000380805 ZC3H18Q86VM9 953 aaKnown RBP19.99■□□□□ 0.79
GMDS-201ENST00000380805 SCML4Q8N228 414 aa19.99■□□□□ 0.79
GMDS-201ENST00000380805 ATXN2LQ8WWM7 1075 aaKnown RBP19.99■□□□□ 0.79
GMDS-201ENST00000380805 SMARCD1Q96GM5 515 aa19.99■□□□□ 0.79
GMDS-201ENST00000380805 XPO6Q96QU8 1125 aaKnown RBP19.99■□□□□ 0.79
GMDS-201ENST00000380805 NOD1Q9Y239 953 aa19.99■□□□□ 0.79
GMDS-201ENST00000380805 SF3B1O75533 1304 aaKnown RBP eCLIP19.99■□□□□ 0.795e-6■■■■■ 96.1
GMDS-201ENST00000380805 GMNCA6NCL1 334 aa19.98■□□□□ 0.79
GMDS-201ENST00000380805 H7C0C1 242 aa19.98■□□□□ 0.79
GMDS-201ENST00000380805 NDUFAB1O14561 156 aa19.98■□□□□ 0.79
GMDS-201ENST00000380805 AP1G2O75843 785 aa19.98■□□□□ 0.79
GMDS-201ENST00000380805 FYNP06241 537 aa19.98■□□□□ 0.79
GMDS-201ENST00000380805 GCAP28676 217 aa19.98■□□□□ 0.79
GMDS-201ENST00000380805 ATP5OP48047 213 aa19.98■□□□□ 0.79
GMDS-201ENST00000380805 PDIA2Q13087 525 aaKnown RBP19.98■□□□□ 0.79
GMDS-201ENST00000380805 SKIDA1Q1XH10 827 aa19.98■□□□□ 0.79
GMDS-201ENST00000380805 PPP6R3Q5H9R7 873 aaPredicted RBP19.98■□□□□ 0.79
GMDS-201ENST00000380805 CDKL3Q8IVW4 592 aaPredicted RBP19.98■□□□□ 0.79
GMDS-201ENST00000380805 ZBED8Q8IZ13 594 aa19.98■□□□□ 0.79
GMDS-201ENST00000380805 ARHGEF2Q92974 986 aaKnown RBP19.98■□□□□ 0.79
GMDS-201ENST00000380805 FAM149B1Q96BN6 582 aa19.98■□□□□ 0.79
GMDS-201ENST00000380805 PGAP3Q96FM1 320 aaPredicted RBP19.98■□□□□ 0.79
GMDS-201ENST00000380805 FRMD8Q9BZ67 464 aaPredicted RBP19.98■□□□□ 0.79
GMDS-201ENST00000380805 RGS18Q9NS28 235 aa19.98■□□□□ 0.79
GMDS-201ENST00000380805 TMEM30AQ9NV96 361 aa19.98■□□□□ 0.79
GMDS-201ENST00000380805 CHN1P15882 459 aa19.97■□□□□ 0.79
GMDS-201ENST00000380805 NDUFV1P49821 464 aa19.97■□□□□ 0.79
GMDS-201ENST00000380805 DCAF6Q58WW2 860 aa19.97■□□□□ 0.79
GMDS-201ENST00000380805 INTS6LQ5JSJ4 861 aaKnown RBP19.97■□□□□ 0.79
GMDS-201ENST00000380805 NTAN1Q96AB6 310 aa19.97■□□□□ 0.79
GMDS-201ENST00000380805 GLT1D1Q96MS3 346 aa19.97■□□□□ 0.79
GMDS-201ENST00000380805 CCT8L2Q96SF2 557 aa19.97■□□□□ 0.79
GMDS-201ENST00000380805 WDR83Q9BRX9 315 aaKnown RBP19.97■□□□□ 0.79
GMDS-201ENST00000380805 UNC93B1Q9H1C4 597 aa19.97■□□□□ 0.79
GMDS-201ENST00000380805 TIMM13Q9Y5L4 95 aaPredicted RBP19.97■□□□□ 0.79
GMDS-201ENST00000380805 CLUHO75153 1309 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms