RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 CCDC186Q7Z3E2 898 aa9.71□□□□□ -0.86
HMGN1-202ENST00000380747 C1orf210Q8IVY1 113 aa9.71□□□□□ -0.86
HMGN1-202ENST00000380747 DHX40Q8IX18 779 aaKnown RBP9.71□□□□□ -0.86
HMGN1-202ENST00000380747 SIX6OS1Q8N1H7 587 aa9.71□□□□□ -0.86
HMGN1-202ENST00000380747 FAM160A2Q8N612 972 aaPredicted RBP9.71□□□□□ -0.86
HMGN1-202ENST00000380747 SUMF1Q8NBK3 374 aa9.71□□□□□ -0.86
HMGN1-202ENST00000380747 RIN3Q8TB24 985 aa9.71□□□□□ -0.86
HMGN1-202ENST00000380747 SHC3Q92529 594 aa9.71□□□□□ -0.86
HMGN1-202ENST00000380747 SHDQ96IW2 340 aa9.71□□□□□ -0.86
HMGN1-202ENST00000380747 ZSWIM1Q9BR11 485 aa9.71□□□□□ -0.86
HMGN1-202ENST00000380747 HSD3B7Q9H2F3 369 aa9.71□□□□□ -0.86
HMGN1-202ENST00000380747 NMUR1Q9HB89 426 aa9.71□□□□□ -0.86
HMGN1-202ENST00000380747 ACP6Q9NPH0 428 aa9.71□□□□□ -0.86
HMGN1-202ENST00000380747 HEBP1Q9NRV9 189 aa9.71□□□□□ -0.86
HMGN1-202ENST00000380747 DUS2Q9NX74 493 aaKnown RBP9.71□□□□□ -0.86
HMGN1-202ENST00000380747 NAGPAQ9UK23 515 aa9.71□□□□□ -0.86
HMGN1-202ENST00000380747 ARHGAP26Q9UNA1 814 aa9.71□□□□□ -0.86
HMGN1-202ENST00000380747 FHOD1Q9Y613 1164 aa9.71□□□□□ -0.86
HMGN1-202ENST00000380747 WNT6Q9Y6F9 365 aa9.71□□□□□ -0.86
HMGN1-202ENST00000380747 CACNA1IQ9P0X4 2223 aa9.7□□□□□ -0.86
HMGN1-202ENST00000380747 MAP1BP46821 2468 aaKnown RBP9.7□□□□□ -0.86
HMGN1-202ENST00000380747 LGALS16A8MUM7 142 aa9.7□□□□□ -0.86
HMGN1-202ENST00000380747 LEFTY2O00292 366 aa9.7□□□□□ -0.86
HMGN1-202ENST00000380747 PIK3R2O00459 728 aa9.7□□□□□ -0.86
HMGN1-202ENST00000380747 SCAMP3O14828 347 aaKnown RBP9.7□□□□□ -0.86
HMGN1-202ENST00000380747 OLFM2O95897 454 aa9.7□□□□□ -0.86
HMGN1-202ENST00000380747 SP9P0CG40 484 aa9.7□□□□□ -0.86
HMGN1-202ENST00000380747 IRF1P10914 325 aa9.7□□□□□ -0.86
HMGN1-202ENST00000380747 RALAP11233 206 aa9.7□□□□□ -0.86
HMGN1-202ENST00000380747 RARGP13631 454 aa9.7□□□□□ -0.86
HMGN1-202ENST00000380747 ATP1A3P13637 1013 aa9.7□□□□□ -0.86
HMGN1-202ENST00000380747 LCP1P13796 627 aa9.7□□□□□ -0.86
HMGN1-202ENST00000380747 ARSAP15289 507 aa9.7□□□□□ -0.86
HMGN1-202ENST00000380747 JUNDP17535 347 aa9.7□□□□□ -0.86
HMGN1-202ENST00000380747 CD72P21854 359 aa9.7□□□□□ -0.86
HMGN1-202ENST00000380747 PLA2G4AP47712 749 aa9.7□□□□□ -0.86
HMGN1-202ENST00000380747 SOX9P48436 509 aa9.7□□□□□ -0.86
HMGN1-202ENST00000380747 YWHAGP61981 247 aaKnown RBP eCLIP9.7□□□□□ -0.86
HMGN1-202ENST00000380747 TPM4P67936 248 aa9.7□□□□□ -0.86
HMGN1-202ENST00000380747 UBXN1Q04323 297 aa9.7□□□□□ -0.86
HMGN1-202ENST00000380747 PTK2Q05397 1052 aa9.7□□□□□ -0.86
HMGN1-202ENST00000380747 TNK2Q07912 1038 aa9.7□□□□□ -0.86
HMGN1-202ENST00000380747 ADIGQ0VDE8 80 aa9.7□□□□□ -0.86
HMGN1-202ENST00000380747 DRAP1Q14919 205 aaPredicted RBP9.7□□□□□ -0.86
HMGN1-202ENST00000380747 UBXN2BQ14CS0 331 aa9.7□□□□□ -0.86
HMGN1-202ENST00000380747 PDGFRLQ15198 375 aa9.7□□□□□ -0.86
HMGN1-202ENST00000380747 SYCP1Q15431 976 aa9.7□□□□□ -0.86
HMGN1-202ENST00000380747 ZNF77Q15935 545 aa9.7□□□□□ -0.86
HMGN1-202ENST00000380747 ZNF528Q3MIS6 628 aa9.7□□□□□ -0.86
HMGN1-202ENST00000380747 ZSCAN23Q3MJ62 389 aa9.7□□□□□ -0.86
HMGN1-202ENST00000380747 PKDCCQ504Y2 493 aa9.7□□□□□ -0.86
HMGN1-202ENST00000380747 RAB41Q5JT25 222 aa9.7□□□□□ -0.86
HMGN1-202ENST00000380747 SNX30Q5VWJ9 437 aa9.7□□□□□ -0.86
HMGN1-202ENST00000380747 TRIM68Q6AZZ1 485 aa9.7□□□□□ -0.86
HMGN1-202ENST00000380747 DPY19L2P1Q6NXN4 242 aa9.7□□□□□ -0.86
HMGN1-202ENST00000380747 SCD5Q86SK9 330 aa9.7□□□□□ -0.86
HMGN1-202ENST00000380747 ARHGAP18Q8N392 663 aa9.7□□□□□ -0.86
HMGN1-202ENST00000380747 GPR161Q8N6U8 529 aaKnown RBP9.7□□□□□ -0.86
HMGN1-202ENST00000380747 SLC35F5Q8WV83 523 aa9.7□□□□□ -0.86
HMGN1-202ENST00000380747 ZNF606Q8WXB4 792 aa9.7□□□□□ -0.86
HMGN1-202ENST00000380747 NDRG1Q92597 394 aaKnown RBP9.7□□□□□ -0.86
HMGN1-202ENST00000380747 ULBP1Q9BZM6 244 aa9.7□□□□□ -0.86
HMGN1-202ENST00000380747 FOXQ1Q9C009 403 aa9.7□□□□□ -0.86
HMGN1-202ENST00000380747 TRPV5Q9NQA5 729 aa9.7□□□□□ -0.86
HMGN1-202ENST00000380747 ST7Q9NRC1 585 aa9.7□□□□□ -0.86
HMGN1-202ENST00000380747 FAM207AQ9NSI2 230 aaPredicted RBP9.7□□□□□ -0.86
HMGN1-202ENST00000380747 OSER1Q9NX31 292 aa9.7□□□□□ -0.86
HMGN1-202ENST00000380747 GTSE1Q9NYZ3 720 aa9.7□□□□□ -0.86
HMGN1-202ENST00000380747 CFAP97Q9P2B7 532 aa9.7□□□□□ -0.86
HMGN1-202ENST00000380747 NUDT5Q9UKK9 219 aa9.7□□□□□ -0.86
HMGN1-202ENST00000380747 SIT1Q9Y3P8 196 aa9.7□□□□□ -0.86
HMGN1-202ENST00000380747 USP3Q9Y6I4 520 aa9.7□□□□□ -0.86
HMGN1-202ENST00000380747 PIAS3Q9Y6X2 628 aa9.7□□□□□ -0.86
HMGN1-202ENST00000380747 CACNA1GO43497 2377 aa9.7□□□□□ -0.86
HMGN1-202ENST00000380747 KANSL1LA0AUZ9 987 aa9.69□□□□□ -0.86
HMGN1-202ENST00000380747 ARNTLO00327 626 aa9.69□□□□□ -0.86
HMGN1-202ENST00000380747 MAN2B1O00754 1011 aa9.69□□□□□ -0.86
HMGN1-202ENST00000380747 MDM4O15151 490 aa9.69□□□□□ -0.86
HMGN1-202ENST00000380747 TBX18O95935 607 aa9.69□□□□□ -0.86
HMGN1-202ENST00000380747 ZBED1O96006 694 aa9.69□□□□□ -0.86
HMGN1-202ENST00000380747 UCHL3P15374 230 aa9.69□□□□□ -0.86
HMGN1-202ENST00000380747 TCF3P15923 654 aa9.69□□□□□ -0.86
HMGN1-202ENST00000380747 ATP5C1P36542 298 aaKnown RBP9.69□□□□□ -0.86
HMGN1-202ENST00000380747 TUBP50607 506 aa9.69□□□□□ -0.86
HMGN1-202ENST00000380747 STARD6P59095 220 aa9.69□□□□□ -0.86
HMGN1-202ENST00000380747 POLR2FP61218 127 aaKnown RBP9.69□□□□□ -0.86
HMGN1-202ENST00000380747 ZXDBP98169 803 aa9.69□□□□□ -0.86
HMGN1-202ENST00000380747 RUNX3Q13761 415 aa9.69□□□□□ -0.86
HMGN1-202ENST00000380747 IQCB1Q15051 598 aa9.69□□□□□ -0.86
HMGN1-202ENST00000380747 NFKBIBQ15653 356 aa9.69□□□□□ -0.86
HMGN1-202ENST00000380747 ITPRIPL2Q3MIP1 535 aa9.69□□□□□ -0.86
HMGN1-202ENST00000380747 FILIP1LQ4L180 1135 aa9.69□□□□□ -0.86
HMGN1-202ENST00000380747 MSS51Q4VC12 460 aa9.69□□□□□ -0.86
HMGN1-202ENST00000380747 C10orf120Q5SQS8 335 aa9.69□□□□□ -0.86
HMGN1-202ENST00000380747 BTBD8Q5XKL5 378 aa9.69□□□□□ -0.86
HMGN1-202ENST00000380747 PMF1Q6P1K2 205 aa9.69□□□□□ -0.86
HMGN1-202ENST00000380747 ZNF852Q6ZMS4 543 aa9.69□□□□□ -0.86
HMGN1-202ENST00000380747 RSRC2Q7L4I2 434 aaKnown RBP9.69□□□□□ -0.86
HMGN1-202ENST00000380747 TADA2BQ86TJ2 420 aa9.69□□□□□ -0.86
HMGN1-202ENST00000380747 LUZP1Q86V48 1076 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms