RNA–Protein interactions for RNA: ENST00000380743.8

SMN2-203, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-203ENST00000380743 PLEKHA7Q6IQ23 1121 aa13.24□□□□□ -0.29
SMN2-203ENST00000380743 DNAJC24Q6P3W2 148 aa13.24□□□□□ -0.29
SMN2-203ENST00000380743 KLHDC10Q6PID8 442 aa13.24□□□□□ -0.29
SMN2-203ENST00000380743 RSRC2Q7L4I2 434 aaKnown RBP13.24□□□□□ -0.29
SMN2-203ENST00000380743 BEND5Q7L4P6 421 aa13.24□□□□□ -0.29
SMN2-203ENST00000380743 DEFB106AQ8N104 65 aa13.24□□□□□ -0.29
SMN2-203ENST00000380743 SMARCD2Q92925 531 aa13.24□□□□□ -0.29
SMN2-203ENST00000380743 USP13Q92995 863 aaPredicted RBP13.24□□□□□ -0.29
SMN2-203ENST00000380743 ZNF653Q96CK0 615 aa13.24□□□□□ -0.29
SMN2-203ENST00000380743 ACSF2Q96CM8 615 aaPredicted RBP13.24□□□□□ -0.29
SMN2-203ENST00000380743 CDK5RAP1Q96SZ6 601 aaKnown RBP13.24□□□□□ -0.29
SMN2-203ENST00000380743 NACA2Q9H009 215 aa13.24□□□□□ -0.29
SMN2-203ENST00000380743 METTL5Q9NRN9 209 aaKnown RBP13.24□□□□□ -0.29
SMN2-203ENST00000380743 CNOT8Q9UFF9 292 aaKnown RBP13.24□□□□□ -0.29
SMN2-203ENST00000380743 DNMT3LQ9UJW3 386 aa13.24□□□□□ -0.29
SMN2-203ENST00000380743 NR2E1Q9Y466 385 aa13.24□□□□□ -0.29
SMN2-203ENST00000380743 ANKRD62A6NC57 917 aa13.23□□□□□ -0.29
SMN2-203ENST00000380743 SIGLEC16A6NMB1 481 aa13.23□□□□□ -0.29
SMN2-203ENST00000380743 EIF3CLB5ME19 914 aaKnown RBP13.23□□□□□ -0.29
SMN2-203ENST00000380743 MYBL1P10243 752 aa13.23□□□□□ -0.29
SMN2-203ENST00000380743 KRT3P12035 628 aa13.23□□□□□ -0.29
SMN2-203ENST00000380743 PFKLP17858 780 aa13.23□□□□□ -0.29
SMN2-203ENST00000380743 FCARP24071 287 aa13.23□□□□□ -0.29
SMN2-203ENST00000380743 WEE1P30291 646 aa13.23□□□□□ -0.29
SMN2-203ENST00000380743 RFC1P35251 1148 aaPredicted RBP13.23□□□□□ -0.29
SMN2-203ENST00000380743 FLT3P36888 993 aa13.23□□□□□ -0.29
SMN2-203ENST00000380743 VIPR2P41587 438 aa13.23□□□□□ -0.29
SMN2-203ENST00000380743 RPL7AP62424 266 aaKnown RBP13.23□□□□□ -0.29
SMN2-203ENST00000380743 SLC7A9P82251 487 aa13.23□□□□□ -0.29
SMN2-203ENST00000380743 TRNP1Q6NT89 227 aa13.23□□□□□ -0.29
SMN2-203ENST00000380743 PARM1Q6UWI2 310 aa13.23□□□□□ -0.29
SMN2-203ENST00000380743 TADA2BQ86TJ2 420 aa13.23□□□□□ -0.29
SMN2-203ENST00000380743 MIB1Q86YT6 1006 aa13.23□□□□□ -0.29
SMN2-203ENST00000380743 EMC1Q8N766 993 aa13.23□□□□□ -0.29
SMN2-203ENST00000380743 TDRD5Q8NAT2 981 aaKnown RBP13.23□□□□□ -0.29
SMN2-203ENST00000380743 JOSD2Q8TAC2 188 aa13.23□□□□□ -0.29
SMN2-203ENST00000380743 ADAM32Q8TC27 787 aa13.23□□□□□ -0.29
SMN2-203ENST00000380743 RNF139Q8WU17 664 aa13.23□□□□□ -0.29
SMN2-203ENST00000380743 ARHGEF26Q96DR7 871 aa13.23□□□□□ -0.29
SMN2-203ENST00000380743 RSPRY1Q96DX4 576 aa13.23□□□□□ -0.29
SMN2-203ENST00000380743 TRIM11Q96F44 468 aa13.23□□□□□ -0.29
SMN2-203ENST00000380743 ZFRQ96KR1 1074 aaKnown RBP13.23□□□□□ -0.29
SMN2-203ENST00000380743 EIF3CQ99613 913 aaKnown RBP13.23□□□□□ -0.29
SMN2-203ENST00000380743 TRIM62Q9BVG3 475 aa13.23□□□□□ -0.29
SMN2-203ENST00000380743 SELENOOQ9BVL4 669 aa13.23□□□□□ -0.29
SMN2-203ENST00000380743 ADAM33Q9BZ11 813 aa13.23□□□□□ -0.29
SMN2-203ENST00000380743 TRPV4Q9HBA0 871 aa13.23□□□□□ -0.29
SMN2-203ENST00000380743 GKN1Q9NS71 199 aa13.23□□□□□ -0.29
SMN2-203ENST00000380743 TDP1Q9NUW8 608 aa13.23□□□□□ -0.29
SMN2-203ENST00000380743 PARVAQ9NVD7 372 aa13.23□□□□□ -0.29
SMN2-203ENST00000380743 SMPD4Q9NXE4 827 aa13.23□□□□□ -0.29
SMN2-203ENST00000380743 MYO1AQ9UBC5 1043 aa13.23□□□□□ -0.29
SMN2-203ENST00000380743 SFMBT1Q9UHJ3 866 aa13.23□□□□□ -0.29
SMN2-203ENST00000380743 BDP1A6H8Y1 2624 aa13.23□□□□□ -0.29
SMN2-203ENST00000380743 LOC730098B7Z3J9 87 aa13.23□□□□□ -0.29
SMN2-203ENST00000380743 DAB1O75553 588 aa13.23□□□□□ -0.29
SMN2-203ENST00000380743 CYP1A2P05177 515 aa13.23□□□□□ -0.29
SMN2-203ENST00000380743 H2AFZP0C0S5 128 aa13.23□□□□□ -0.29
SMN2-203ENST00000380743 MBL2P11226 248 aaPredicted RBP13.23□□□□□ -0.29
SMN2-203ENST00000380743 MATKP42679 507 aa13.23□□□□□ -0.29
SMN2-203ENST00000380743 GPC5P78333 572 aa13.23□□□□□ -0.29
SMN2-203ENST00000380743 PITX1P78337 314 aaPredicted RBP13.23□□□□□ -0.29
SMN2-203ENST00000380743 CCZ1BP86790 482 aa13.23□□□□□ -0.29
SMN2-203ENST00000380743 CCZ1P86791 482 aaPredicted RBP13.23□□□□□ -0.29
SMN2-203ENST00000380743 SPA17Q15506 151 aa13.23□□□□□ -0.29
SMN2-203ENST00000380743 TANGO2Q6ICL3 276 aa13.23□□□□□ -0.29
SMN2-203ENST00000380743 MSANTD2Q6P1R3 559 aa13.23□□□□□ -0.29
SMN2-203ENST00000380743 H2AFVQ71UI9 128 aa13.23□□□□□ -0.29
SMN2-203ENST00000380743 ARCQ7LC44 396 aa13.23□□□□□ -0.29
SMN2-203ENST00000380743 ADHFE1Q8IWW8 467 aa13.23□□□□□ -0.29
SMN2-203ENST00000380743 RIN3Q8TB24 985 aa13.23□□□□□ -0.29
SMN2-203ENST00000380743 DQX1Q8TE96 717 aaKnown RBP13.23□□□□□ -0.29
SMN2-203ENST00000380743 FGF14Q92915 247 aa13.23□□□□□ -0.29
SMN2-203ENST00000380743 LRRC3BQ96PB8 259 aa13.23□□□□□ -0.29
SMN2-203ENST00000380743 MCEEQ96PE7 176 aa13.23□□□□□ -0.29
SMN2-203ENST00000380743 KLF16Q9BXK1 252 aaPredicted RBP13.23□□□□□ -0.29
SMN2-203ENST00000380743 OLA1Q9NTK5 396 aaKnown RBP13.23□□□□□ -0.29
SMN2-203ENST00000380743 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.23□□□□□ -0.29
SMN2-203ENST00000380743 MARCH2Q9P0N8 246 aa13.23□□□□□ -0.29
SMN2-203ENST00000380743 CALCOCO1Q9P1Z2 691 aa13.23□□□□□ -0.29
SMN2-203ENST00000380743 LIMD1Q9UGP4 676 aa13.23□□□□□ -0.29
SMN2-203ENST00000380743 ARHGAP26Q9UNA1 814 aa13.23□□□□□ -0.29
SMN2-203ENST00000380743 REXO2Q9Y3B8 237 aaKnown RBP13.23□□□□□ -0.29
SMN2-203ENST00000380743 PCDHA13Q9Y5I0 950 aa13.23□□□□□ -0.29
SMN2-203ENST00000380743 CPQQ9Y646 472 aa13.23□□□□□ -0.29
SMN2-203ENST00000380743 C2CD4BA6NLJ0 364 aa13.22□□□□□ -0.29
SMN2-203ENST00000380743 MSI1O43347 362 aaKnown RBP13.22□□□□□ -0.29
SMN2-203ENST00000380743 PTMAP06454 111 aaKnown RBP13.22□□□□□ -0.29
SMN2-203ENST00000380743 TFE3P19532 575 aaPredicted RBP13.22□□□□□ -0.29
SMN2-203ENST00000380743 NOS2P35228 1153 aa13.22□□□□□ -0.29
SMN2-203ENST00000380743 MAGEA1P43355 309 aa13.22□□□□□ -0.29
SMN2-203ENST00000380743 ZP2Q05996 745 aa13.22□□□□□ -0.29
SMN2-203ENST00000380743 C10orf76Q5T2E6 689 aa13.22□□□□□ -0.29
SMN2-203ENST00000380743 TAC4Q86UU9 113 aa13.22□□□□□ -0.29
SMN2-203ENST00000380743 ZDHHC14Q8IZN3 488 aa13.22□□□□□ -0.29
SMN2-203ENST00000380743 ACRBPQ8NEB7 543 aa13.22□□□□□ -0.29
SMN2-203ENST00000380743 TTC16Q8NEE8 873 aa13.22□□□□□ -0.29
SMN2-203ENST00000380743 CCDC112Q8NEF3 446 aa13.22□□□□□ -0.29
SMN2-203ENST00000380743 ADAMTS19Q8TE59 1207 aa13.22□□□□□ -0.29
SMN2-203ENST00000380743 RXFP2Q8WXD0 754 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms