RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 DNAJB4Q9UDY4 337 aa20.66■□□□□ 0.9
PDLIM5-205ENST00000380180 STAP1Q9ULZ2 295 aa20.66■□□□□ 0.9
PDLIM5-205ENST00000380180 PCDHB8Q9UN66 801 aa20.66■□□□□ 0.9
PDLIM5-205ENST00000380180 PATJQ8NI35 1801 aa20.66■□□□□ 0.9
PDLIM5-205ENST00000380180 ZNF487B1APH4 448 aa20.65■□□□□ 0.9
PDLIM5-205ENST00000380180 M0QYT0 321 aa20.65■□□□□ 0.9
PDLIM5-205ENST00000380180 TGM2P21980 687 aa20.65■□□□□ 0.9
PDLIM5-205ENST00000380180 CYP2F1P24903 491 aa20.65■□□□□ 0.9
PDLIM5-205ENST00000380180 DARS2Q6PI48 645 aaKnown RBP20.65■□□□□ 0.9
PDLIM5-205ENST00000380180 CTU1Q7Z7A3 348 aaKnown RBP20.65■□□□□ 0.9
PDLIM5-205ENST00000380180 ZCCHC9Q8N567 271 aaKnown RBP20.65■□□□□ 0.9
PDLIM5-205ENST00000380180 FAM71DQ8N9W8 422 aa20.65■□□□□ 0.9
PDLIM5-205ENST00000380180 KCTD15Q96SI1 283 aaPredicted RBP20.65■□□□□ 0.9
PDLIM5-205ENST00000380180 NRDE2Q9H7Z3 1164 aa20.65■□□□□ 0.9
PDLIM5-205ENST00000380180 BCCIPQ9P287 314 aaKnown RBP eCLIP20.65■□□□□ 0.9
PDLIM5-205ENST00000380180 FZD10Q9ULW2 581 aa20.65■□□□□ 0.9
PDLIM5-205ENST00000380180 HEY1Q9Y5J3 304 aa20.65■□□□□ 0.9
PDLIM5-205ENST00000380180 SYNJ2BP-COX16A0A087WUM0 186 aa20.65■□□□□ 0.9
PDLIM5-205ENST00000380180 CAPN9O14815 690 aa20.65■□□□□ 0.9
PDLIM5-205ENST00000380180 ZBED1O96006 694 aa20.65■□□□□ 0.9
PDLIM5-205ENST00000380180 RPL22P35268 128 aaKnown RBP20.65■□□□□ 0.9
PDLIM5-205ENST00000380180 YWHAHQ04917 246 aaPredicted RBP20.65■□□□□ 0.9
PDLIM5-205ENST00000380180 RNASEH2BQ5TBB1 312 aaKnown RBP20.65■□□□□ 0.9
PDLIM5-205ENST00000380180 PYROXD2Q8N2H3 581 aa20.65■□□□□ 0.9
PDLIM5-205ENST00000380180 FAM193BQ96PV7 902 aaPredicted RBP20.65■□□□□ 0.9
PDLIM5-205ENST00000380180 COX16Q9P0S2 106 aa20.65■□□□□ 0.9
PDLIM5-205ENST00000380180 ACSL3O95573 720 aa20.64■□□□□ 0.89
PDLIM5-205ENST00000380180 TTC4O95801 387 aa20.64■□□□□ 0.89
PDLIM5-205ENST00000380180 COL6A1P12109 1028 aa20.64■□□□□ 0.89
PDLIM5-205ENST00000380180 STIP1P31948 543 aaKnown RBP20.64■□□□□ 0.89
PDLIM5-205ENST00000380180 TSPY1Q01534 308 aa20.64■□□□□ 0.89
PDLIM5-205ENST00000380180 ROR1Q01973 937 aa20.64■□□□□ 0.89
PDLIM5-205ENST00000380180 NME3Q13232 169 aa20.64■□□□□ 0.89
PDLIM5-205ENST00000380180 MORF4L2Q15014 288 aa20.64■□□□□ 0.89
PDLIM5-205ENST00000380180 MAPRE1Q15691 268 aaKnown RBP20.64■□□□□ 0.89
PDLIM5-205ENST00000380180 KYNUQ16719 465 aa20.64■□□□□ 0.89
PDLIM5-205ENST00000380180 SKIDA1Q1XH10 827 aa20.64■□□□□ 0.89
PDLIM5-205ENST00000380180 AGBL2Q5U5Z8 902 aa20.64■□□□□ 0.89
PDLIM5-205ENST00000380180 FOXP3Q9BZS1 431 aa20.64■□□□□ 0.89
PDLIM5-205ENST00000380180 CWC15Q9P013 229 aaKnown RBP20.64■□□□□ 0.89
PDLIM5-205ENST00000380180 H7C0C1 242 aa20.63■□□□□ 0.89
PDLIM5-205ENST00000380180 TMEM189-UBE2V1I3L0A0 370 aa20.63■□□□□ 0.89
PDLIM5-205ENST00000380180 RDXP35241 583 aaKnown RBP20.63■□□□□ 0.89
PDLIM5-205ENST00000380180 ATP5OP48047 213 aa20.63■□□□□ 0.89
PDLIM5-205ENST00000380180 DEUP1Q05D60 604 aa20.63■□□□□ 0.89
PDLIM5-205ENST00000380180 RBM15Q96T37 977 aaKnown RBP eCLIP20.63■□□□□ 0.89
PDLIM5-205ENST00000380180 RNF208Q9H0X6 261 aa20.63■□□□□ 0.89
PDLIM5-205ENST00000380180 ELAC1Q9H777 363 aaKnown RBP20.63■□□□□ 0.89
PDLIM5-205ENST00000380180 DMAP1Q9NPF5 467 aaPredicted RBP20.63■□□□□ 0.89
PDLIM5-205ENST00000380180 PRG3Q9Y2Y8 225 aaPredicted RBP20.63■□□□□ 0.89
PDLIM5-205ENST00000380180 PCDHB7Q9Y5E2 793 aa20.63■□□□□ 0.89
PDLIM5-205ENST00000380180 PITPNM1O00562 1244 aa20.63■□□□□ 0.89
PDLIM5-205ENST00000380180 PQBP1O60828 265 aaKnown RBP20.63■□□□□ 0.89
PDLIM5-205ENST00000380180 MAP3K6O95382 1288 aa20.63■□□□□ 0.89
PDLIM5-205ENST00000380180 LTFP02788 710 aa20.63■□□□□ 0.89
PDLIM5-205ENST00000380180 NCAM1P13591 858 aa20.63■□□□□ 0.89
PDLIM5-205ENST00000380180 NRLP54845 237 aa20.63■□□□□ 0.89
PDLIM5-205ENST00000380180 BHLHA9Q7RTU4 235 aa20.63■□□□□ 0.89
PDLIM5-205ENST00000380180 PCGF5Q86SE9 256 aa20.63■□□□□ 0.89
PDLIM5-205ENST00000380180 HOOK3Q86VS8 718 aa20.63■□□□□ 0.89
PDLIM5-205ENST00000380180 RELL1Q8IUW5 271 aa20.63■□□□□ 0.89
PDLIM5-205ENST00000380180 SLC7A14Q8TBB6 771 aa20.63■□□□□ 0.89
PDLIM5-205ENST00000380180 CSPG4P5Q96PW8 444 aa20.63■□□□□ 0.89
PDLIM5-205ENST00000380180 TMPRSS4Q9NRS4 437 aa20.63■□□□□ 0.89
PDLIM5-205ENST00000380180 PIGVQ9NUD9 493 aa20.63■□□□□ 0.89
PDLIM5-205ENST00000380180 TLDC2A0PJX2 215 aa20.62■□□□□ 0.89
PDLIM5-205ENST00000380180 NR1D1P20393 614 aa20.62■□□□□ 0.89
PDLIM5-205ENST00000380180 CTCFP49711 727 aaPredicted RBP20.62■□□□□ 0.89
PDLIM5-205ENST00000380180 ZNF771Q7L3S4 317 aaPredicted RBP20.62■□□□□ 0.89
PDLIM5-205ENST00000380180 PSTKQ8IV42 348 aaKnown RBP20.62■□□□□ 0.89
PDLIM5-205ENST00000380180 ADAM32Q8TC27 787 aa20.62■□□□□ 0.89
PDLIM5-205ENST00000380180 PKNOX2Q96KN3 472 aa20.62■□□□□ 0.89
PDLIM5-205ENST00000380180 NINJ2Q9NZG7 142 aa20.62■□□□□ 0.89
PDLIM5-205ENST00000380180 OGDHLQ9ULD0 1010 aa20.62■□□□□ 0.89
PDLIM5-205ENST00000380180 NOVA2Q9UNW9 492 aaKnown RBP20.62■□□□□ 0.89
PDLIM5-205ENST00000380180 FARP1Q9Y4F1 1045 aaPredicted RBP20.62■□□□□ 0.89
PDLIM5-205ENST00000380180 FNDC1Q4ZHG4 1894 aaPredicted RBP20.62■□□□□ 0.89
PDLIM5-205ENST00000380180 NDC80O14777 642 aa20.61■□□□□ 0.89
PDLIM5-205ENST00000380180 CCL5P13501 91 aa20.61■□□□□ 0.89
PDLIM5-205ENST00000380180 GOT1P17174 413 aa20.61■□□□□ 0.89
PDLIM5-205ENST00000380180 ATP1A2P50993 1020 aa20.61■□□□□ 0.89
PDLIM5-205ENST00000380180 TCTN1Q2MV58 587 aa20.61■□□□□ 0.89
PDLIM5-205ENST00000380180 GLIPR1L2Q4G1C9 344 aa20.61■□□□□ 0.89
PDLIM5-205ENST00000380180 PM20D1Q6GTS8 502 aa20.61■□□□□ 0.89
PDLIM5-205ENST00000380180 KDM7AQ6ZMT4 941 aa20.61■□□□□ 0.89
PDLIM5-205ENST00000380180 ABI1Q8IZP0 508 aa20.61■□□□□ 0.89
PDLIM5-205ENST00000380180 TAB3Q8N5C8 712 aaPredicted RBP20.61■□□□□ 0.89
PDLIM5-205ENST00000380180 CPT1BQ92523 772 aa20.61■□□□□ 0.89
PDLIM5-205ENST00000380180 SEPT8Q92599 483 aa20.61■□□□□ 0.89
PDLIM5-205ENST00000380180 PRCCQ92733 491 aaPredicted RBP20.61■□□□□ 0.89
PDLIM5-205ENST00000380180 TMEM109Q9BVC6 243 aa20.61■□□□□ 0.89
PDLIM5-205ENST00000380180 USP29Q9HBJ7 922 aa20.61■□□□□ 0.89
PDLIM5-205ENST00000380180 SHOC2Q9UQ13 582 aa20.61■□□□□ 0.89
PDLIM5-205ENST00000380180 TANC1Q9C0D5 1861 aa20.61■□□□□ 0.89
PDLIM5-205ENST00000380180 TADA2AO75478 443 aa20.61■□□□□ 0.89
PDLIM5-205ENST00000380180 OAZ2O95190 189 aa20.61■□□□□ 0.89
PDLIM5-205ENST00000380180 OR4Q2P0C623 313 aa20.61■□□□□ 0.89
PDLIM5-205ENST00000380180 CAPN2P17655 700 aa20.61■□□□□ 0.89
PDLIM5-205ENST00000380180 AMPD1P23109 780 aa20.61■□□□□ 0.89
PDLIM5-205ENST00000380180 SKOR1P84550 965 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms