RNA–Protein interactions for RNA: ENST00000380025.8

NDEL1-202, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5 BASIC

Gene NDEL1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-202ENST00000380025 KCNA10Q16322 511 aa25.96■■□□□ 1.75
NDEL1-202ENST00000380025 BBS9Q3SYG4 887 aa25.96■■□□□ 1.75
NDEL1-202ENST00000380025 TRABD2AQ86V40 505 aa25.96■■□□□ 1.75
NDEL1-202ENST00000380025 LRRC34Q8IZ02 419 aa25.96■■□□□ 1.75
NDEL1-202ENST00000380025 ANKRD42Q8N9B4 389 aa25.96■■□□□ 1.75
NDEL1-202ENST00000380025 KRT82Q9NSB4 513 aa25.96■■□□□ 1.75
NDEL1-202ENST00000380025 TIMM13Q9Y5L4 95 aaPredicted RBP25.96■■□□□ 1.75
NDEL1-202ENST00000380025 CHADO15335 359 aa25.96■■□□□ 1.75
NDEL1-202ENST00000380025 CCND3P30281 292 aaPredicted RBP25.96■■□□□ 1.75
NDEL1-202ENST00000380025 CD52P31358 61 aa25.96■■□□□ 1.75
NDEL1-202ENST00000380025 MAP3K7CLP57077 242 aa25.96■■□□□ 1.75
NDEL1-202ENST00000380025 YWHAZP63104 245 aaKnown RBP25.96■■□□□ 1.75
NDEL1-202ENST00000380025 PITX1P78337 314 aaPredicted RBP25.96■■□□□ 1.75
NDEL1-202ENST00000380025 GBE1Q04446 702 aa25.96■■□□□ 1.75
NDEL1-202ENST00000380025 SLC10A2Q12908 348 aaPredicted RBP25.96■■□□□ 1.75
NDEL1-202ENST00000380025 NR1H3Q13133 447 aa25.96■■□□□ 1.75
NDEL1-202ENST00000380025 EFHC2Q5JST6 749 aa25.96■■□□□ 1.75
NDEL1-202ENST00000380025 GKAP1Q5VSY0 366 aaPredicted RBP25.96■■□□□ 1.75
NDEL1-202ENST00000380025 FAM131BQ86XD5 332 aa25.96■■□□□ 1.75
NDEL1-202ENST00000380025 LRRN4Q8WUT4 740 aa25.96■■□□□ 1.75
NDEL1-202ENST00000380025 NT5C3BQ969T7 300 aa25.96■■□□□ 1.75
NDEL1-202ENST00000380025 SYT15Q9BQS2 421 aa25.96■■□□□ 1.75
NDEL1-202ENST00000380025 PAAF1Q9BRP4 392 aa25.96■■□□□ 1.75
NDEL1-202ENST00000380025 PPCSQ9HAB8 311 aa25.96■■□□□ 1.75
NDEL1-202ENST00000380025 LRRC4Q9HBW1 653 aa25.96■■□□□ 1.75
NDEL1-202ENST00000380025 SLC24A2Q9UI40 661 aa25.96■■□□□ 1.75
NDEL1-202ENST00000380025 PADI3Q9ULW8 664 aa25.96■■□□□ 1.75
NDEL1-202ENST00000380025 USP3Q9Y6I4 520 aa25.96■■□□□ 1.75
NDEL1-202ENST00000380025 TSC2P49815 1807 aa25.96■■□□□ 1.75
NDEL1-202ENST00000380025 CASP8AP2Q9UKL3 1982 aa25.95■■□□□ 1.75
NDEL1-202ENST00000380025 MGEA5O60502 916 aa25.95■■□□□ 1.74
NDEL1-202ENST00000380025 RPLP2P05387 115 aaKnown RBP25.95■■□□□ 1.74
NDEL1-202ENST00000380025 FAM200BP0CF97 657 aa25.95■■□□□ 1.74
NDEL1-202ENST00000380025 PHBP35232 272 aa25.95■■□□□ 1.74
NDEL1-202ENST00000380025 LHX1P48742 406 aa25.95■■□□□ 1.74
NDEL1-202ENST00000380025 RASA2Q15283 850 aa25.95■■□□□ 1.74
NDEL1-202ENST00000380025 DCAF6Q58WW2 860 aa25.95■■□□□ 1.74
NDEL1-202ENST00000380025 BNIPLQ7Z465 357 aa25.95■■□□□ 1.74
NDEL1-202ENST00000380025 PYROXD2Q8N2H3 581 aa25.95■■□□□ 1.74
NDEL1-202ENST00000380025 KLHDC9Q8NEP7 349 aa25.95■■□□□ 1.74
NDEL1-202ENST00000380025 RAB6BQ9NRW1 208 aa25.95■■□□□ 1.74
NDEL1-202ENST00000380025 FZD10Q9ULW2 581 aa25.95■■□□□ 1.74
NDEL1-202ENST00000380025 CASTOR2A6NHX0 329 aa25.95■■□□□ 1.74
NDEL1-202ENST00000380025 MYCNP04198 464 aaPredicted RBP25.95■■□□□ 1.74
NDEL1-202ENST00000380025 ZFXP17010 805 aaPredicted RBP25.95■■□□□ 1.74
NDEL1-202ENST00000380025 SYCP2LQ5T4T6 812 aa25.95■■□□□ 1.74
NDEL1-202ENST00000380025 CCSAPQ6IQ19 270 aaPredicted RBP25.95■■□□□ 1.74
NDEL1-202ENST00000380025 DSTYKQ6XUX3 929 aa25.95■■□□□ 1.74
NDEL1-202ENST00000380025 YTHDF3Q7Z739 585 aaKnown RBP25.95■■□□□ 1.74
NDEL1-202ENST00000380025 CACNA2D3Q8IZS8 1091 aa25.95■■□□□ 1.74
NDEL1-202ENST00000380025 MLXIPLQ9NP71 852 aa25.95■■□□□ 1.74
NDEL1-202ENST00000380025 C3orf62Q6ZUJ4 267 aa25.94■■□□□ 1.74
NDEL1-202ENST00000380025 CDKL3Q8IVW4 592 aaPredicted RBP25.94■■□□□ 1.74
NDEL1-202ENST00000380025 SIX6OS1Q8N1H7 587 aa25.94■■□□□ 1.74
NDEL1-202ENST00000380025 DYDC1Q8WWB3 177 aa25.94■■□□□ 1.74
NDEL1-202ENST00000380025 NPY6RQ99463 290 aa25.94■■□□□ 1.74
NDEL1-202ENST00000380025 FETUBQ9UGM5 382 aa25.94■■□□□ 1.74
NDEL1-202ENST00000380025 MYBPHLA2RUH7 354 aa25.93■■□□□ 1.74
NDEL1-202ENST00000380025 GHRP10912 638 aa25.93■■□□□ 1.74
NDEL1-202ENST00000380025 GOT1P17174 413 aa25.93■■□□□ 1.74
NDEL1-202ENST00000380025 NOS2P35228 1153 aa25.93■■□□□ 1.74
NDEL1-202ENST00000380025 TKTL1P51854 596 aa25.93■■□□□ 1.74
NDEL1-202ENST00000380025 IFT88Q13099 833 aa25.93■■□□□ 1.74
NDEL1-202ENST00000380025 EFTUD2Q15029 972 aaKnown RBP eCLIP25.93■■□□□ 1.741e-9■■■■■ 30.9
NDEL1-202ENST00000380025 PKN2Q16513 984 aaKnown RBP25.93■■□□□ 1.74
NDEL1-202ENST00000380025 UPP1Q16831 310 aa25.93■■□□□ 1.74
NDEL1-202ENST00000380025 FAM35AQ86V20 835 aa25.93■■□□□ 1.74
NDEL1-202ENST00000380025 IGDCC3Q8IVU1 814 aa25.93■■□□□ 1.74
NDEL1-202ENST00000380025 PCED1BQ96HM7 432 aa25.93■■□□□ 1.74
NDEL1-202ENST00000380025 SLC2A13Q96QE2 648 aa25.93■■□□□ 1.74
NDEL1-202ENST00000380025 ACSS3Q9H6R3 686 aa25.93■■□□□ 1.74
NDEL1-202ENST00000380025 ZNF623O75123 536 aa25.93■■□□□ 1.74
NDEL1-202ENST00000380025 RPL9P32969 192 aaKnown RBP25.93■■□□□ 1.74
NDEL1-202ENST00000380025 NR2C2P49116 596 aa25.93■■□□□ 1.74
NDEL1-202ENST00000380025 RABGGTBP53611 331 aa25.93■■□□□ 1.74
NDEL1-202ENST00000380025 GEMIN4P57678 1058 aaKnown RBP25.93■■□□□ 1.74
NDEL1-202ENST00000380025 XRCC4Q13426 336 aa25.93■■□□□ 1.74
NDEL1-202ENST00000380025 SLC45A4Q5BKX6 768 aa25.93■■□□□ 1.74
NDEL1-202ENST00000380025 NCBP2-AS2Q69YL0 99 aa25.93■■□□□ 1.74
NDEL1-202ENST00000380025 HFE2Q6ZVN8 426 aa25.93■■□□□ 1.74
NDEL1-202ENST00000380025 C10orf67Q8IYJ2 551 aa25.93■■□□□ 1.74
NDEL1-202ENST00000380025 SMOQ99835 787 aa25.93■■□□□ 1.74
NDEL1-202ENST00000380025 TMEM30AQ9NV96 361 aa25.93■■□□□ 1.74
NDEL1-202ENST00000380025 ETNK2Q9NVF9 386 aa25.93■■□□□ 1.74
NDEL1-202ENST00000380025 PSMC3IPQ9P2W1 217 aaPredicted RBP25.93■■□□□ 1.74
NDEL1-202ENST00000380025 CHMP2BQ9UQN3 213 aa25.93■■□□□ 1.74
NDEL1-202ENST00000380025 KIAA0754O94854 1291 aa25.92■■□□□ 1.74
NDEL1-202ENST00000380025 TSHRP16473 764 aa25.92■■□□□ 1.74
NDEL1-202ENST00000380025 SYPL2Q5VXT5 272 aa25.92■■□□□ 1.74
NDEL1-202ENST00000380025 PALM2Q8IXS6 379 aa25.92■■□□□ 1.74
NDEL1-202ENST00000380025 FBF1Q8TES7 1133 aa25.92■■□□□ 1.74
NDEL1-202ENST00000380025 MRRFQ96E11 262 aaKnown RBP25.92■■□□□ 1.74
NDEL1-202ENST00000380025 MFHAS1Q9Y4C4 1052 aa25.92■■□□□ 1.74
NDEL1-202ENST00000380025 GTF3C5Q9Y5Q8 519 aaPredicted RBP25.92■■□□□ 1.74
NDEL1-202ENST00000380025 NRP1O14786 923 aa25.92■■□□□ 1.74
NDEL1-202ENST00000380025 AP1G2O75843 785 aa25.92■■□□□ 1.74
NDEL1-202ENST00000380025 VIMP08670 466 aaKnown RBP25.92■■□□□ 1.74
NDEL1-202ENST00000380025 AMPD1P23109 780 aa25.92■■□□□ 1.74
NDEL1-202ENST00000380025 ELK3P41970 407 aa25.92■■□□□ 1.74
NDEL1-202ENST00000380025 CBLBQ13191 982 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms