RNA–Protein interactions for RNA: ENST00000378904.4

LYSMD4-203, Transcript of LysM domain containing 4, humanhuman

BASIC

Gene LYSMD4, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-203ENST00000378904 LIASO43766 372 aa18.27■□□□□ 0.52
LYSMD4-203ENST00000378904 BAIAP3O94812 1187 aa18.27■□□□□ 0.52
LYSMD4-203ENST00000378904 ECHS1P30084 290 aa18.27■□□□□ 0.52
LYSMD4-203ENST00000378904 RDXP35241 583 aaKnown RBP18.27■□□□□ 0.52
LYSMD4-203ENST00000378904 HLTFQ14527 1009 aaKnown RBP eCLIP18.27■□□□□ 0.52
LYSMD4-203ENST00000378904 SRLQ86TD4 932 aa18.27■□□□□ 0.52
LYSMD4-203ENST00000378904 FAM131BQ86XD5 332 aa18.27■□□□□ 0.52
LYSMD4-203ENST00000378904 EIF1ADQ8N9N8 165 aaKnown RBP18.27■□□□□ 0.52
LYSMD4-203ENST00000378904 ATAD1Q8NBU5 361 aa18.27■□□□□ 0.52
LYSMD4-203ENST00000378904 SLC7A14Q8TBB6 771 aa18.27■□□□□ 0.52
LYSMD4-203ENST00000378904 GRK7Q8WTQ7 553 aa18.27■□□□□ 0.52
LYSMD4-203ENST00000378904 CCDC114Q96M63 670 aa18.27■□□□□ 0.52
LYSMD4-203ENST00000378904 VN1R3Q9BXE9 311 aa18.27■□□□□ 0.52
LYSMD4-203ENST00000378904 RASSF4Q9H2L5 321 aa18.27■□□□□ 0.52
LYSMD4-203ENST00000378904 PCDH18Q9HCL0 1135 aa18.27■□□□□ 0.52
LYSMD4-203ENST00000378904 IL23AQ9NPF7 189 aa18.27■□□□□ 0.52
LYSMD4-203ENST00000378904 COX16Q9P0S2 106 aa18.27■□□□□ 0.52
LYSMD4-203ENST00000378904 TRIM66O15016 1216 aa18.26■□□□□ 0.51
LYSMD4-203ENST00000378904 MAGEA11P43364 429 aa18.26■□□□□ 0.51
LYSMD4-203ENST00000378904 TNNT3P45378 269 aaPredicted RBP18.26■□□□□ 0.51
LYSMD4-203ENST00000378904 GPR15P49685 360 aa18.26■□□□□ 0.51
LYSMD4-203ENST00000378904 KRT17Q04695 432 aa18.26■□□□□ 0.51
LYSMD4-203ENST00000378904 DEUP1Q05D60 604 aa18.26■□□□□ 0.51
LYSMD4-203ENST00000378904 GPR17Q13304 367 aa18.26■□□□□ 0.51
LYSMD4-203ENST00000378904 BTG3Q14201 252 aaPredicted RBP18.26■□□□□ 0.51
LYSMD4-203ENST00000378904 USP41Q3LFD5 358 aa18.26■□□□□ 0.51
LYSMD4-203ENST00000378904 BSPRYQ5W0U4 402 aa18.26■□□□□ 0.51
LYSMD4-203ENST00000378904 EMBQ6PCB8 327 aa18.26■□□□□ 0.51
LYSMD4-203ENST00000378904 OTOP2Q7RTS6 562 aa18.26■□□□□ 0.51
LYSMD4-203ENST00000378904 RNF168Q8IYW5 571 aaPredicted RBP18.26■□□□□ 0.51
LYSMD4-203ENST00000378904 EDEM1Q92611 657 aa18.26■□□□□ 0.51
LYSMD4-203ENST00000378904 C8orf48Q96LL4 319 aa18.26■□□□□ 0.51
LYSMD4-203ENST00000378904 MAK16Q9BXY0 300 aaKnown RBP18.26■□□□□ 0.51
LYSMD4-203ENST00000378904 OXCT2Q9BYC2 517 aaPredicted RBP18.26■□□□□ 0.51
LYSMD4-203ENST00000378904 DNPEPQ9ULA0 475 aa18.26■□□□□ 0.51
LYSMD4-203ENST00000378904 AP4E1Q9UPM8 1137 aa18.26■□□□□ 0.51
LYSMD4-203ENST00000378904 KIAA1671Q9BY89 1806 aa18.26■□□□□ 0.51
LYSMD4-203ENST00000378904 MTMR11A4FU01 709 aa18.26■□□□□ 0.51
LYSMD4-203ENST00000378904 IL4RP24394 825 aa18.26■□□□□ 0.51
LYSMD4-203ENST00000378904 NME3Q13232 169 aa18.26■□□□□ 0.51
LYSMD4-203ENST00000378904 PPP1R7Q15435 360 aa18.26■□□□□ 0.51
LYSMD4-203ENST00000378904 DPYSL2Q16555 572 aa18.26■□□□□ 0.51
LYSMD4-203ENST00000378904 DDR2Q16832 855 aa18.26■□□□□ 0.51
LYSMD4-203ENST00000378904 SDHAF4Q5VUM1 108 aa18.26■□□□□ 0.51
LYSMD4-203ENST00000378904 DRICH1Q6PGQ1 229 aaPredicted RBP18.26■□□□□ 0.51
LYSMD4-203ENST00000378904 SND1Q7KZF4 910 aaKnown RBP eCLIP18.26■□□□□ 0.51
LYSMD4-203ENST00000378904 CMTR2Q8IYT2 770 aaKnown RBP18.26■□□□□ 0.51
LYSMD4-203ENST00000378904 TTC9BQ8N6N2 239 aa18.26■□□□□ 0.51
LYSMD4-203ENST00000378904 FAM71BQ8TC56 605 aa18.26■□□□□ 0.51
LYSMD4-203ENST00000378904 DHX35Q9H5Z1 703 aaKnown RBP18.26■□□□□ 0.51
LYSMD4-203ENST00000378904 PIGVQ9NUD9 493 aa18.26■□□□□ 0.51
LYSMD4-203ENST00000378904 VPS18Q9P253 973 aa18.26■□□□□ 0.51
LYSMD4-203ENST00000378904 SNX24Q9Y343 169 aa18.26■□□□□ 0.51
LYSMD4-203ENST00000378904 PLXNA3P51805 1871 aa18.25■□□□□ 0.51
LYSMD4-203ENST00000378904 L1CAMP32004 1257 aa18.25■□□□□ 0.51
LYSMD4-203ENST00000378904 DRG2P55039 364 aaKnown RBP18.25■□□□□ 0.51
LYSMD4-203ENST00000378904 BYSLQ13895 437 aaKnown RBP18.25■□□□□ 0.51
LYSMD4-203ENST00000378904 CASP8Q14790 479 aa18.25■□□□□ 0.51
LYSMD4-203ENST00000378904 PPP6R3Q5H9R7 873 aaPredicted RBP18.25■□□□□ 0.51
LYSMD4-203ENST00000378904 RNF19BQ6ZMZ0 732 aa18.25■□□□□ 0.51
LYSMD4-203ENST00000378904 VSIG1Q86XK7 387 aa18.25■□□□□ 0.51
LYSMD4-203ENST00000378904 TTC13Q8NBP0 860 aa18.25■□□□□ 0.51
LYSMD4-203ENST00000378904 STKLD1Q8NE28 680 aa18.25■□□□□ 0.51
LYSMD4-203ENST00000378904 ADAM32Q8TC27 787 aa18.25■□□□□ 0.51
LYSMD4-203ENST00000378904 SPPL2BQ8TCT7 592 aa18.25■□□□□ 0.51
LYSMD4-203ENST00000378904 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.25■□□□□ 0.51
LYSMD4-203ENST00000378904 ZNF558Q96NG5 402 aa18.25■□□□□ 0.51
LYSMD4-203ENST00000378904 RNF157Q96PX1 679 aa18.25■□□□□ 0.51
LYSMD4-203ENST00000378904 MAGEB5Q9BZ81 275 aa18.25■□□□□ 0.51
LYSMD4-203ENST00000378904 NEUROG2Q9H2A3 272 aa18.25■□□□□ 0.51
LYSMD4-203ENST00000378904 RRN3Q9NYV6 651 aa18.25■□□□□ 0.51
LYSMD4-203ENST00000378904 SAE1Q9UBE0 346 aaPredicted RBP18.25■□□□□ 0.51
LYSMD4-203ENST00000378904 FZD10Q9ULW2 581 aa18.25■□□□□ 0.51
LYSMD4-203ENST00000378904 CDY1Q9Y6F8 540 aa18.25■□□□□ 0.51
LYSMD4-203ENST00000378904 MRPL42Q9Y6G3 142 aaKnown RBP18.25■□□□□ 0.51
LYSMD4-203ENST00000378904 ZNF638Q14966 1978 aaKnown RBP18.25■□□□□ 0.51
LYSMD4-203ENST00000378904 GAS8O95995 478 aa18.25■□□□□ 0.51
LYSMD4-203ENST00000378904 IVLP07476 585 aa18.25■□□□□ 0.51
LYSMD4-203ENST00000378904 FAM153BP0C7A2 387 aa18.25■□□□□ 0.51
LYSMD4-203ENST00000378904 OTUD4Q01804 1114 aaKnown RBP18.25■□□□□ 0.51
LYSMD4-203ENST00000378904 SMARCB1Q12824 385 aa18.25■□□□□ 0.51
LYSMD4-203ENST00000378904 FAM153CQ494X1 144 aa18.25■□□□□ 0.51
LYSMD4-203ENST00000378904 SYDE1Q6ZW31 735 aaPredicted RBP18.25■□□□□ 0.51
LYSMD4-203ENST00000378904 C16orf59Q7L2K0 433 aa18.25■□□□□ 0.51
LYSMD4-203ENST00000378904 NUP93Q8N1F7 819 aa18.25■□□□□ 0.51
LYSMD4-203ENST00000378904 ACTL9Q8TC94 416 aa18.25■□□□□ 0.51
LYSMD4-203ENST00000378904 RIN2Q8WYP3 895 aaPredicted RBP18.25■□□□□ 0.51
LYSMD4-203ENST00000378904 CAVIN3Q969G5 261 aa18.25■□□□□ 0.51
LYSMD4-203ENST00000378904 PGAP3Q96FM1 320 aaPredicted RBP18.25■□□□□ 0.51
LYSMD4-203ENST00000378904 ZNF670Q9BS34 389 aa18.25■□□□□ 0.51
LYSMD4-203ENST00000378904 MTMR10Q9NXD2 777 aa18.25■□□□□ 0.51
LYSMD4-203ENST00000378904 FAM153AQ9UHL3 310 aa18.25■□□□□ 0.51
LYSMD4-203ENST00000378904 GREB1Q4ZG55 1949 aa18.24■□□□□ 0.51
LYSMD4-203ENST00000378904 APOC4-APOC2K7ER74 178 aa18.24■□□□□ 0.51
LYSMD4-203ENST00000378904 VNN2O95498 520 aa18.24■□□□□ 0.51
LYSMD4-203ENST00000378904 APOC2P02655 101 aa18.24■□□□□ 0.51
LYSMD4-203ENST00000378904 RPL21P46778 160 aaKnown RBP18.24■□□□□ 0.51
LYSMD4-203ENST00000378904 YWHAGP61981 247 aaKnown RBP eCLIP18.24■□□□□ 0.51
LYSMD4-203ENST00000378904 TFDP2Q14188 446 aa18.24■□□□□ 0.51
LYSMD4-203ENST00000378904 PSMD5Q16401 504 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms