RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.9■□□□□ 0.78
TMEM88B-201ENST00000378821 A0A1W2PQH9 124 aa19.89■□□□□ 0.77
TMEM88B-201ENST00000378821 TULP3O75386 442 aa19.89■□□□□ 0.77
TMEM88B-201ENST00000378821 AFPP02771 609 aaKnown RBP19.89■□□□□ 0.77
TMEM88B-201ENST00000378821 RARGP13631 454 aa19.89■□□□□ 0.77
TMEM88B-201ENST00000378821 HNRNPLP14866 589 aaKnown RBP eCLIP19.89■□□□□ 0.77
TMEM88B-201ENST00000378821 PLA2G4AP47712 749 aa19.89■□□□□ 0.77
TMEM88B-201ENST00000378821 LIMK1P53667 647 aa19.89■□□□□ 0.77
TMEM88B-201ENST00000378821 PREPLQ4J6C6 727 aaPredicted RBP19.89■□□□□ 0.77
TMEM88B-201ENST00000378821 ZNF394Q53GI3 561 aa19.89■□□□□ 0.77
TMEM88B-201ENST00000378821 Q6ZNB5 142 aa19.89■□□□□ 0.77
TMEM88B-201ENST00000378821 ANKRD52Q8NB46 1076 aa19.89■□□□□ 0.77
TMEM88B-201ENST00000378821 OLIG1Q8TAK6 271 aa19.89■□□□□ 0.77
TMEM88B-201ENST00000378821 ARRDC1-AS1Q9H2J1 176 aa19.89■□□□□ 0.77
TMEM88B-201ENST00000378821 THAP9Q9H5L6 903 aa19.89■□□□□ 0.77
TMEM88B-201ENST00000378821 STARD13Q9Y3M8 1113 aa19.89■□□□□ 0.77
TMEM88B-201ENST00000378821 PLXND1Q9Y4D7 1925 aa19.88■□□□□ 0.77
TMEM88B-201ENST00000378821 SGK1O00141 431 aa19.88■□□□□ 0.77
TMEM88B-201ENST00000378821 P4HA2O15460 535 aa19.88■□□□□ 0.77
TMEM88B-201ENST00000378821 CACNG3O60359 315 aa19.88■□□□□ 0.77
TMEM88B-201ENST00000378821 ADAM23O75077 832 aa19.88■□□□□ 0.77
TMEM88B-201ENST00000378821 GOLGA8FQ08AF8 430 aa19.88■□□□□ 0.77
TMEM88B-201ENST00000378821 GOLGA8DPQ0D2H9 430 aa19.88■□□□□ 0.77
TMEM88B-201ENST00000378821 LRMPQ12912 555 aa19.88■□□□□ 0.77
TMEM88B-201ENST00000378821 CT47A1Q5JQC4 288 aaPredicted RBP19.88■□□□□ 0.77
TMEM88B-201ENST00000378821 EMC10Q5UCC4 262 aa19.88■□□□□ 0.77
TMEM88B-201ENST00000378821 BTBD8Q5XKL5 378 aa19.88■□□□□ 0.77
TMEM88B-201ENST00000378821 SASS6Q6UVJ0 657 aa19.88■□□□□ 0.77
TMEM88B-201ENST00000378821 C11orf57Q6ZUT1 292 aaPredicted RBP19.88■□□□□ 0.77
TMEM88B-201ENST00000378821 C11orf74Q86VG3 221 aa19.88■□□□□ 0.77
TMEM88B-201ENST00000378821 CREBRFQ8IUR6 639 aa19.88■□□□□ 0.77
TMEM88B-201ENST00000378821 CCDC33Q8N5R6 958 aa19.88■□□□□ 0.77
TMEM88B-201ENST00000378821 ALLCQ8N6M5 410 aa19.88■□□□□ 0.77
TMEM88B-201ENST00000378821 UBR7Q8N806 425 aa19.88■□□□□ 0.77
TMEM88B-201ENST00000378821 LMO3Q8TAP4 145 aa19.88■□□□□ 0.77
TMEM88B-201ENST00000378821 CDK5RAP1Q96SZ6 601 aaKnown RBP19.88■□□□□ 0.77
TMEM88B-201ENST00000378821 DEC1Q9P2X7 70 aa19.88■□□□□ 0.77
TMEM88B-201ENST00000378821 HCN2Q9UL51 889 aa19.88■□□□□ 0.77
TMEM88B-201ENST00000378821 MYO18AQ92614 2054 aaKnown RBP19.88■□□□□ 0.77
TMEM88B-201ENST00000378821 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.87■□□□□ 0.77
TMEM88B-201ENST00000378821 GDF9O60383 454 aa19.87■□□□□ 0.77
TMEM88B-201ENST00000378821 RHOBTB1O94844 696 aa19.87■□□□□ 0.77
TMEM88B-201ENST00000378821 KLF8O95600 359 aaPredicted RBP19.87■□□□□ 0.77
TMEM88B-201ENST00000378821 CUL2Q13617 745 aa19.87■□□□□ 0.77
TMEM88B-201ENST00000378821 STX1AQ16623 288 aa19.87■□□□□ 0.77
TMEM88B-201ENST00000378821 USP39Q53GS9 565 aaKnown RBP19.87■□□□□ 0.77
TMEM88B-201ENST00000378821 HSP90AA4PQ58FG1 418 aa19.87■□□□□ 0.77
TMEM88B-201ENST00000378821 EOGTQ5NDL2 527 aa19.87■□□□□ 0.77
TMEM88B-201ENST00000378821 PM20D1Q6GTS8 502 aa19.87■□□□□ 0.77
TMEM88B-201ENST00000378821 CAVIN1Q6NZI2 390 aaKnown RBP19.87■□□□□ 0.77
TMEM88B-201ENST00000378821 TADA2BQ86TJ2 420 aa19.87■□□□□ 0.77
TMEM88B-201ENST00000378821 TERB1Q8NA31 727 aa19.87■□□□□ 0.77
TMEM88B-201ENST00000378821 TXNDC5Q8NBS9 432 aaKnown RBP19.87■□□□□ 0.77
TMEM88B-201ENST00000378821 MDGA1Q8NFP4 955 aa19.87■□□□□ 0.77
TMEM88B-201ENST00000378821 JAKMIP2Q96AA8 810 aa19.87■□□□□ 0.77
TMEM88B-201ENST00000378821 WDR35Q9P2L0 1181 aa19.87■□□□□ 0.77
TMEM88B-201ENST00000378821 SDK1Q7Z5N4 2213 aa19.86■□□□□ 0.77
TMEM88B-201ENST00000378821 TM4SF5O14894 197 aa19.86■□□□□ 0.77
TMEM88B-201ENST00000378821 DCLK1O15075 740 aa19.86■□□□□ 0.77
TMEM88B-201ENST00000378821 STC2O76061 302 aa19.86■□□□□ 0.77
TMEM88B-201ENST00000378821 IRF1P10914 325 aa19.86■□□□□ 0.77
TMEM88B-201ENST00000378821 TIE1P35590 1138 aa19.86■□□□□ 0.77
TMEM88B-201ENST00000378821 MTIF2P46199 727 aaKnown RBP19.86■□□□□ 0.77
TMEM88B-201ENST00000378821 KDSRQ06136 332 aa19.86■□□□□ 0.77
TMEM88B-201ENST00000378821 ELF2Q15723 593 aa19.86■□□□□ 0.77
TMEM88B-201ENST00000378821 C10orf120Q5SQS8 335 aa19.86■□□□□ 0.77
TMEM88B-201ENST00000378821 PMS2CLQ68D20 193 aa19.86■□□□□ 0.77
TMEM88B-201ENST00000378821 PIGZQ86VD9 579 aa19.86■□□□□ 0.77
TMEM88B-201ENST00000378821 TTC30AQ86WT1 665 aa19.86■□□□□ 0.77
TMEM88B-201ENST00000378821 NAT16Q8N8M0 369 aa19.86■□□□□ 0.77
TMEM88B-201ENST00000378821 NT5C1BQ96P26 610 aa19.86■□□□□ 0.77
TMEM88B-201ENST00000378821 ANO10Q9NW15 660 aa19.86■□□□□ 0.77
TMEM88B-201ENST00000378821 NAGPAQ9UK23 515 aa19.86■□□□□ 0.77
TMEM88B-201ENST00000378821 LSM7Q9UK45 103 aaKnown RBP19.86■□□□□ 0.77
TMEM88B-201ENST00000378821 FBXO10Q9UK96 956 aa19.86■□□□□ 0.77
TMEM88B-201ENST00000378821 KIAA1257Q9ULG3 409 aa19.86■□□□□ 0.77
TMEM88B-201ENST00000378821 NUP205Q92621 2012 aa19.85■□□□□ 0.77
TMEM88B-201ENST00000378821 BCLAF3A2AJT9 711 aaKnown RBP19.85■□□□□ 0.77
TMEM88B-201ENST00000378821 TBC1D3BA6NDS4 549 aa19.85■□□□□ 0.77
TMEM88B-201ENST00000378821 MDM4O15151 490 aa19.85■□□□□ 0.77
TMEM88B-201ENST00000378821 ALDH1A2O94788 518 aa19.85■□□□□ 0.77
TMEM88B-201ENST00000378821 KLKB1P03952 638 aa19.85■□□□□ 0.77
TMEM88B-201ENST00000378821 RALAP11233 206 aa19.85■□□□□ 0.77
TMEM88B-201ENST00000378821 MPLP40238 635 aa19.85■□□□□ 0.77
TMEM88B-201ENST00000378821 CETN1Q12798 172 aa19.85■□□□□ 0.77
TMEM88B-201ENST00000378821 SF3A2Q15428 464 aaKnown RBP19.85■□□□□ 0.77
TMEM88B-201ENST00000378821 ANO4Q32M45 955 aa19.85■□□□□ 0.77
TMEM88B-201ENST00000378821 ANO7Q6IWH7 933 aa19.85■□□□□ 0.77
TMEM88B-201ENST00000378821 NUDT18Q6ZVK8 323 aa19.85■□□□□ 0.77
TMEM88B-201ENST00000378821 BHLHA9Q7RTU4 235 aa19.85■□□□□ 0.77
TMEM88B-201ENST00000378821 FAM114A1Q8IWE2 563 aa19.85■□□□□ 0.77
TMEM88B-201ENST00000378821 ARHGAP18Q8N392 663 aa19.85■□□□□ 0.77
TMEM88B-201ENST00000378821 INTS2Q9H0H0 1204 aaKnown RBP19.85■□□□□ 0.77
TMEM88B-201ENST00000378821 VPS45Q9NRW7 570 aa19.85■□□□□ 0.77
TMEM88B-201ENST00000378821 SAMSN1Q9NSI8 373 aaKnown RBP19.85■□□□□ 0.77
TMEM88B-201ENST00000378821 NUDT5Q9UKK9 219 aa19.85■□□□□ 0.77
TMEM88B-201ENST00000378821 ZNF510Q9Y2H8 683 aa19.85■□□□□ 0.77
TMEM88B-201ENST00000378821 NFE2L3Q9Y4A8 694 aa19.85■□□□□ 0.77
TMEM88B-201ENST00000378821 LAMA1P25391 3075 aa19.85■□□□□ 0.77
TMEM88B-201ENST00000378821 ABCA7Q8IZY2 2146 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms