RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 CDY2AQ9Y6F7 541 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 CDY1Q9Y6F8 540 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 NRXN2Q9P2S2 1712 aa8.49□□□□□ -1.05
PTPRR-203ENST00000378778 ADAMTSL1Q8N6G6 1762 aa8.49□□□□□ -1.05
PTPRR-203ENST00000378778 E9PBE3 544 aa8.49□□□□□ -1.05
PTPRR-203ENST00000378778 GOLGA8SH3BPF8 625 aa8.49□□□□□ -1.05
PTPRR-203ENST00000378778 GOLGA8MH3BSY2 632 aa8.49□□□□□ -1.05
PTPRR-203ENST00000378778 GPR25O00155 361 aa8.49□□□□□ -1.05
PTPRR-203ENST00000378778 HNRNPDLO14979 420 aaKnown RBP8.49□□□□□ -1.05
PTPRR-203ENST00000378778 DNAJA2O60884 412 aa8.49□□□□□ -1.05
PTPRR-203ENST00000378778 SIN3BO75182 1162 aa8.49□□□□□ -1.05
PTPRR-203ENST00000378778 TRMUO75648 421 aaKnown RBP8.49□□□□□ -1.05
PTPRR-203ENST00000378778 C8BP07358 591 aa8.49□□□□□ -1.05
PTPRR-203ENST00000378778 THRAP10827 490 aa8.49□□□□□ -1.05
PTPRR-203ENST00000378778 ITGB5P18084 799 aa8.49□□□□□ -1.05
PTPRR-203ENST00000378778 TNNI1P19237 187 aa8.49□□□□□ -1.05
PTPRR-203ENST00000378778 TGM2P21980 687 aa8.49□□□□□ -1.05
PTPRR-203ENST00000378778 PEX2P28328 305 aa8.49□□□□□ -1.05
PTPRR-203ENST00000378778 SERPINB6P35237 376 aa8.49□□□□□ -1.05
PTPRR-203ENST00000378778 ADGRE1Q14246 886 aa8.49□□□□□ -1.05
PTPRR-203ENST00000378778 RFTN1Q14699 578 aaPredicted RBP8.49□□□□□ -1.05
PTPRR-203ENST00000378778 CNGA3Q16281 694 aa8.49□□□□□ -1.05
PTPRR-203ENST00000378778 TDRD10Q5VZ19 366 aaKnown RBP8.49□□□□□ -1.05
PTPRR-203ENST00000378778 RWDD4Q6NW29 188 aaKnown RBP8.49□□□□□ -1.05
PTPRR-203ENST00000378778 BBS5Q8N3I7 341 aa8.49□□□□□ -1.05
PTPRR-203ENST00000378778 ZBTB8BQ8NAP8 495 aaPredicted RBP8.49□□□□□ -1.05
PTPRR-203ENST00000378778 GAB3Q8WWW8 586 aa8.49□□□□□ -1.05
PTPRR-203ENST00000378778 ATP6V0A1Q93050 837 aa8.49□□□□□ -1.05
PTPRR-203ENST00000378778 TOP1MTQ969P6 601 aa8.49□□□□□ -1.05
PTPRR-203ENST00000378778 VPS50Q96JG6 964 aa8.49□□□□□ -1.05
PTPRR-203ENST00000378778 CNDP1Q96KN2 507 aa8.49□□□□□ -1.05
PTPRR-203ENST00000378778 KLF6Q99612 283 aaPredicted RBP8.49□□□□□ -1.05
PTPRR-203ENST00000378778 PLGRKTQ9HBL7 147 aa8.49□□□□□ -1.05
PTPRR-203ENST00000378778 POPDC2Q9HBU9 364 aa8.49□□□□□ -1.05
PTPRR-203ENST00000378778 ALG13Q9NP73 1137 aaKnown RBP8.49□□□□□ -1.05
PTPRR-203ENST00000378778 CLIC5Q9NZA1 410 aa8.49□□□□□ -1.05
PTPRR-203ENST00000378778 MID2Q9UJV3 735 aa8.49□□□□□ -1.05
PTPRR-203ENST00000378778 BLOC1S6Q9UL45 172 aa8.49□□□□□ -1.05
PTPRR-203ENST00000378778 SSUH2Q9Y2M2 353 aa8.49□□□□□ -1.05
PTPRR-203ENST00000378778 BCLAF3A2AJT9 711 aaKnown RBP8.49□□□□□ -1.05
PTPRR-203ENST00000378778 UNCXA6NJT0 531 aa8.49□□□□□ -1.05
PTPRR-203ENST00000378778 TMEM114B3SHH9 223 aa8.49□□□□□ -1.05
PTPRR-203ENST00000378778 F8VP50 259 aa8.49□□□□□ -1.05
PTPRR-203ENST00000378778 PPEF1O14829 653 aaPredicted RBP8.49□□□□□ -1.05
PTPRR-203ENST00000378778 HNRNPRO43390 633 aaKnown RBP8.49□□□□□ -1.05
PTPRR-203ENST00000378778 USP1O94782 785 aa8.49□□□□□ -1.05
PTPRR-203ENST00000378778 VNN1O95497 513 aa8.49□□□□□ -1.05
PTPRR-203ENST00000378778 RBP3P10745 1247 aa8.49□□□□□ -1.05
PTPRR-203ENST00000378778 CDK4P11802 303 aa8.49□□□□□ -1.05
PTPRR-203ENST00000378778 MLNP12872 115 aa8.49□□□□□ -1.05
PTPRR-203ENST00000378778 ZFXP17010 805 aaPredicted RBP8.49□□□□□ -1.05
PTPRR-203ENST00000378778 PSMA2P25787 234 aa8.49□□□□□ -1.05
PTPRR-203ENST00000378778 MAGEA3P43357 314 aa8.49□□□□□ -1.05
PTPRR-203ENST00000378778 CD97P48960 835 aa8.49□□□□□ -1.05
PTPRR-203ENST00000378778 CDK9P50750 372 aaKnown RBP8.49□□□□□ -1.05
PTPRR-203ENST00000378778 RPL7AP62424 266 aaKnown RBP8.49□□□□□ -1.05
PTPRR-203ENST00000378778 BASP1P80723 227 aaKnown RBP8.49□□□□□ -1.05
PTPRR-203ENST00000378778 GRAMD1BQ3KR37 738 aa8.49□□□□□ -1.05
PTPRR-203ENST00000378778 ATP13A4Q4VNC1 1196 aa8.49□□□□□ -1.05
PTPRR-203ENST00000378778 MBLAC2Q68D91 279 aa8.49□□□□□ -1.05
PTPRR-203ENST00000378778 PPM1NQ8N819 430 aa8.49□□□□□ -1.05
PTPRR-203ENST00000378778 FBXO27Q8NI29 283 aa8.49□□□□□ -1.05
PTPRR-203ENST00000378778 PYDC1Q8WXC3 89 aa8.49□□□□□ -1.05
PTPRR-203ENST00000378778 SLC7A3Q8WY07 619 aa8.49□□□□□ -1.05
PTPRR-203ENST00000378778 NMD3Q96D46 503 aaKnown RBP8.49□□□□□ -1.05
PTPRR-203ENST00000378778 CLMNQ96JQ2 1002 aa8.49□□□□□ -1.05
PTPRR-203ENST00000378778 CLPTM1LQ96KA5 538 aa8.49□□□□□ -1.05
PTPRR-203ENST00000378778 FAM213AQ9BRX8 229 aa8.49□□□□□ -1.05
PTPRR-203ENST00000378778 NAT9Q9BTE0 207 aa8.49□□□□□ -1.05
PTPRR-203ENST00000378778 OCEL1Q9H607 264 aa8.49□□□□□ -1.05
PTPRR-203ENST00000378778 PCDH18Q9HCL0 1135 aa8.49□□□□□ -1.05
PTPRR-203ENST00000378778 PDLIM7Q9NR12 457 aa8.49□□□□□ -1.05
PTPRR-203ENST00000378778 VPS45Q9NRW7 570 aa8.49□□□□□ -1.05
PTPRR-203ENST00000378778 HOMER2Q9NSB8 354 aa8.49□□□□□ -1.05
PTPRR-203ENST00000378778 FAIMQ9NVQ4 179 aa8.49□□□□□ -1.05
PTPRR-203ENST00000378778 FAM198AQ9UFP1 575 aa8.49□□□□□ -1.05
PTPRR-203ENST00000378778 DDTLA6NHG4 134 aaPredicted RBP8.48□□□□□ -1.05
PTPRR-203ENST00000378778 ICAM1P05362 532 aa8.48□□□□□ -1.05
PTPRR-203ENST00000378778 ZNF23P17027 643 aa8.48□□□□□ -1.05
PTPRR-203ENST00000378778 ITGAXP20702 1163 aa8.48□□□□□ -1.05
PTPRR-203ENST00000378778 PMLP29590 882 aa8.48□□□□□ -1.05
PTPRR-203ENST00000378778 SLC1A6P48664 564 aa8.48□□□□□ -1.05
PTPRR-203ENST00000378778 LIG4P49917 911 aa8.48□□□□□ -1.05
PTPRR-203ENST00000378778 MYL6P60660 151 aa8.48□□□□□ -1.05
PTPRR-203ENST00000378778 YWHAZP63104 245 aaKnown RBP8.48□□□□□ -1.05
PTPRR-203ENST00000378778 NFIAQ12857 509 aa8.48□□□□□ -1.05
PTPRR-203ENST00000378778 PDK2Q15119 407 aa8.48□□□□□ -1.05
PTPRR-203ENST00000378778 CCDC153Q494R4 210 aa8.48□□□□□ -1.05
PTPRR-203ENST00000378778 NADK2Q4G0N4 442 aa8.48□□□□□ -1.05
PTPRR-203ENST00000378778 TEDDM1Q5T9Z0 273 aa8.48□□□□□ -1.05
PTPRR-203ENST00000378778 STEAP4Q687X5 459 aa8.48□□□□□ -1.05
PTPRR-203ENST00000378778 PDPK2PQ6A1A2 396 aa8.48□□□□□ -1.05
PTPRR-203ENST00000378778 RNF111Q6ZNA4 994 aa8.48□□□□□ -1.05
PTPRR-203ENST00000378778 ZNF410Q86VK4 478 aa8.48□□□□□ -1.05
PTPRR-203ENST00000378778 RFX6Q8HWS3 928 aa8.48□□□□□ -1.05
PTPRR-203ENST00000378778 MAP7D3Q8IWC1 876 aa8.48□□□□□ -1.05
PTPRR-203ENST00000378778 UNC45BQ8IWX7 931 aa8.48□□□□□ -1.05
PTPRR-203ENST00000378778 FNDC8Q8TC99 324 aa8.48□□□□□ -1.05
PTPRR-203ENST00000378778 HM13Q8TCT9 377 aa8.48□□□□□ -1.05
PTPRR-203ENST00000378778 FAF2Q96CS3 445 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms