RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 ALKBH8Q96BT7 664 aaKnown RBP14.68□□□□□ -0.06
SHROOM1-203ENST00000378679 ACTR5Q9H9F9 607 aaPredicted RBP14.68□□□□□ -0.06
SHROOM1-203ENST00000378679 TXLNGQ9NUQ3 528 aa14.68□□□□□ -0.06
SHROOM1-203ENST00000378679 TRIM49D1C9J1S8 452 aa14.67□□□□□ -0.06
SHROOM1-203ENST00000378679 APOC4-APOC2K7ER74 178 aa14.67□□□□□ -0.06
SHROOM1-203ENST00000378679 FKTNO75072 461 aa14.67□□□□□ -0.06
SHROOM1-203ENST00000378679 APOC2P02655 101 aa14.67□□□□□ -0.06
SHROOM1-203ENST00000378679 NOS2P35228 1153 aa14.67□□□□□ -0.06
SHROOM1-203ENST00000378679 BRCC3P46736 316 aa14.67□□□□□ -0.06
SHROOM1-203ENST00000378679 GEMIN4P57678 1058 aaKnown RBP14.67□□□□□ -0.06
SHROOM1-203ENST00000378679 PRKCZQ05513 592 aa14.67□□□□□ -0.06
SHROOM1-203ENST00000378679 SLC39A4Q6P5W5 647 aa14.67□□□□□ -0.06
SHROOM1-203ENST00000378679 KCNT2Q6UVM3 1135 aa14.67□□□□□ -0.06
SHROOM1-203ENST00000378679 TRIM67Q6ZTA4 783 aa14.67□□□□□ -0.06
SHROOM1-203ENST00000378679 FBXL18Q96ME1 805 aa14.67□□□□□ -0.06
SHROOM1-203ENST00000378679 LRRC37BQ96QE4 947 aa14.67□□□□□ -0.06
SHROOM1-203ENST00000378679 DDX23Q9BUQ8 820 aaKnown RBP14.67□□□□□ -0.06
SHROOM1-203ENST00000378679 AAASQ9NRG9 546 aa14.67□□□□□ -0.06
SHROOM1-203ENST00000378679 TRPM5Q9NZQ8 1165 aa14.67□□□□□ -0.06
SHROOM1-203ENST00000378679 TELO2Q9Y4R8 837 aa14.67□□□□□ -0.06
SHROOM1-203ENST00000378679 COL22A1Q8NFW1 1626 aaPredicted RBP14.67□□□□□ -0.06
SHROOM1-203ENST00000378679 COL2A1P02458 1487 aaPredicted RBP14.67□□□□□ -0.06
SHROOM1-203ENST00000378679 MYH1P12882 1939 aa14.67□□□□□ -0.06
SHROOM1-203ENST00000378679 E2F8A0AVK6 867 aa14.67□□□□□ -0.06
SHROOM1-203ENST00000378679 UNCXA6NJT0 531 aa14.67□□□□□ -0.06
SHROOM1-203ENST00000378679 O00370 1275 aa14.67□□□□□ -0.06
SHROOM1-203ENST00000378679 DNALI1O14645 258 aaPredicted RBP14.67□□□□□ -0.06
SHROOM1-203ENST00000378679 LGR5O75473 907 aa14.67□□□□□ -0.06
SHROOM1-203ENST00000378679 DCTN3O75935 186 aa14.67□□□□□ -0.06
SHROOM1-203ENST00000378679 NFKBIAP25963 317 aa14.67□□□□□ -0.06
SHROOM1-203ENST00000378679 BTG3Q14201 252 aaPredicted RBP14.67□□□□□ -0.06
SHROOM1-203ENST00000378679 TMC7Q7Z402 723 aa14.67□□□□□ -0.06
SHROOM1-203ENST00000378679 B3GNT5Q9BYG0 378 aa14.67□□□□□ -0.06
SHROOM1-203ENST00000378679 UBP1Q9NZI7 540 aa14.67□□□□□ -0.06
SHROOM1-203ENST00000378679 NOCTQ9UK39 431 aaKnown RBP14.67□□□□□ -0.06
SHROOM1-203ENST00000378679 SHOC2Q9UQ13 582 aa14.67□□□□□ -0.06
SHROOM1-203ENST00000378679 SH3BP1Q9Y3L3 701 aa14.67□□□□□ -0.06
SHROOM1-203ENST00000378679 ZMYM2Q9UBW7 1377 aa14.67□□□□□ -0.06
SHROOM1-203ENST00000378679 NEMP1O14524 444 aa14.67□□□□□ -0.06
SHROOM1-203ENST00000378679 CILPO75339 1184 aa14.67□□□□□ -0.06
SHROOM1-203ENST00000378679 ARFIP2P53365 341 aa14.67□□□□□ -0.06
SHROOM1-203ENST00000378679 STX1BP61266 288 aa14.67□□□□□ -0.06
SHROOM1-203ENST00000378679 ASTE1Q2TB18 679 aaPredicted RBP14.67□□□□□ -0.06
SHROOM1-203ENST00000378679 ZNF467Q7Z7K2 595 aaPredicted RBP14.67□□□□□ -0.06
SHROOM1-203ENST00000378679 PLEKHO2Q8TD55 490 aa14.67□□□□□ -0.06
SHROOM1-203ENST00000378679 RRN3Q9NYV6 651 aa14.67□□□□□ -0.06
SHROOM1-203ENST00000378679 GIT1Q9Y2X7 761 aa14.67□□□□□ -0.06
SHROOM1-203ENST00000378679 KRT4P19013 534 aa14.66□□□□□ -0.06
SHROOM1-203ENST00000378679 SERPINB9P50453 376 aa14.66□□□□□ -0.06
SHROOM1-203ENST00000378679 TWF1Q12792 350 aa14.66□□□□□ -0.06
SHROOM1-203ENST00000378679 USP10Q14694 798 aaKnown RBP14.66□□□□□ -0.06
SHROOM1-203ENST00000378679 RFX8Q6ZV50 586 aa14.66□□□□□ -0.06
SHROOM1-203ENST00000378679 TAS2R42Q7RTR8 314 aa14.66□□□□□ -0.06
SHROOM1-203ENST00000378679 RIBC1Q8N443 379 aaPredicted RBP14.66□□□□□ -0.06
SHROOM1-203ENST00000378679 PDCD7Q8N8D1 485 aaKnown RBP14.66□□□□□ -0.06
SHROOM1-203ENST00000378679 WNT8BQ93098 351 aa14.66□□□□□ -0.06
SHROOM1-203ENST00000378679 DEFB118Q96PH6 123 aa14.66□□□□□ -0.06
SHROOM1-203ENST00000378679 FBXO44Q9H4M3 255 aa14.66□□□□□ -0.06
SHROOM1-203ENST00000378679 TMBIM4Q9HC24 238 aa14.66□□□□□ -0.06
SHROOM1-203ENST00000378679 MAP2K7O14733 419 aa14.66□□□□□ -0.06
SHROOM1-203ENST00000378679 ATP4AP20648 1035 aa14.66□□□□□ -0.06
SHROOM1-203ENST00000378679 UGP2Q16851 508 aa14.66□□□□□ -0.06
SHROOM1-203ENST00000378679 NOMO2Q5JPE7 1267 aa14.66□□□□□ -0.06
SHROOM1-203ENST00000378679 LDLRAD1Q5T700 205 aa14.66□□□□□ -0.06
SHROOM1-203ENST00000378679 AGR3Q8TD06 166 aa14.66□□□□□ -0.06
SHROOM1-203ENST00000378679 TFAP2BQ92481 460 aa14.66□□□□□ -0.06
SHROOM1-203ENST00000378679 SNRNP25Q9BV90 132 aaKnown RBP14.66□□□□□ -0.06
SHROOM1-203ENST00000378679 APOBEC2Q9Y235 224 aaKnown RBP14.66□□□□□ -0.06
SHROOM1-203ENST00000378679 MYH7P12883 1935 aa14.66□□□□□ -0.06
SHROOM1-203ENST00000378679 ANXA9O76027 345 aa14.66□□□□□ -0.06
SHROOM1-203ENST00000378679 CHRNB2P17787 502 aa14.66□□□□□ -0.06
SHROOM1-203ENST00000378679 RBL1P28749 1068 aa14.66□□□□□ -0.06
SHROOM1-203ENST00000378679 GRK4P32298 578 aa14.66□□□□□ -0.06
SHROOM1-203ENST00000378679 SPRP35270 261 aaPredicted RBP14.66□□□□□ -0.06
SHROOM1-203ENST00000378679 SLC12A1Q13621 1099 aa14.66□□□□□ -0.06
SHROOM1-203ENST00000378679 TFAP2DQ7Z6R9 452 aa14.66□□□□□ -0.06
SHROOM1-203ENST00000378679 COLGALT1Q8NBJ5 622 aa14.66□□□□□ -0.06
SHROOM1-203ENST00000378679 MYH6P13533 1939 aa14.66□□□□□ -0.06
SHROOM1-203ENST00000378679 SDR42E2A6NKP2 422 aa14.65□□□□□ -0.06
SHROOM1-203ENST00000378679 TULP2O00295 520 aa14.65□□□□□ -0.06
SHROOM1-203ENST00000378679 FSCN2O14926 492 aa14.65□□□□□ -0.06
SHROOM1-203ENST00000378679 PIGRP01833 764 aa14.65□□□□□ -0.06
SHROOM1-203ENST00000378679 LRG1P02750 347 aa14.65□□□□□ -0.06
SHROOM1-203ENST00000378679 RPL9P32969 192 aaKnown RBP14.65□□□□□ -0.06
SHROOM1-203ENST00000378679 NSUN2Q08J23 767 aaKnown RBP eCLIP14.65□□□□□ -0.06
SHROOM1-203ENST00000378679 RBBP5Q15291 538 aaKnown RBP14.65□□□□□ -0.06
SHROOM1-203ENST00000378679 TRADDQ15628 312 aa14.65□□□□□ -0.06
SHROOM1-203ENST00000378679 ZNF792Q3KQV3 632 aa14.65□□□□□ -0.06
SHROOM1-203ENST00000378679 PLEKHA7Q6IQ23 1121 aa14.65□□□□□ -0.06
SHROOM1-203ENST00000378679 FGFR1OP2Q9NVK5 253 aa14.65□□□□□ -0.06
SHROOM1-203ENST00000378679 GTSE1Q9NYZ3 720 aa14.65□□□□□ -0.06
SHROOM1-203ENST00000378679 DERAQ9Y315 318 aa14.65□□□□□ -0.06
SHROOM1-203ENST00000378679 F5H5T6 163 aa14.65□□□□□ -0.06
SHROOM1-203ENST00000378679 VNN1O95497 513 aa14.65□□□□□ -0.06
SHROOM1-203ENST00000378679 TGM2P21980 687 aa14.65□□□□□ -0.06
SHROOM1-203ENST00000378679 YWHAQP27348 245 aa14.65□□□□□ -0.06
SHROOM1-203ENST00000378679 RAD23BP54727 409 aa14.65□□□□□ -0.06
SHROOM1-203ENST00000378679 LCLAT1Q6UWP7 414 aa14.65□□□□□ -0.06
SHROOM1-203ENST00000378679 LRRC57Q8N9N7 239 aa14.65□□□□□ -0.06
SHROOM1-203ENST00000378679 GANCQ8TET4 914 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms