RNA–Protein interactions for RNA: ENST00000377387.5

SF1-203, Transcript of splicing factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SF1, Length 2,947 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-203ENST00000377387 YIPF3Q9GZM5 350 aa18.8■□□□□ 0.6
SF1-203ENST00000377387 KLC2Q9H0B6 622 aa18.8■□□□□ 0.6
SF1-203ENST00000377387 MCM3APO60318 1980 aa18.8■□□□□ 0.6
SF1-203ENST00000377387 E2F8A0AVK6 867 aa18.8■□□□□ 0.6
SF1-203ENST00000377387 CHADO15335 359 aa18.8■□□□□ 0.6
SF1-203ENST00000377387 GABRB2P47870 512 aa18.8■□□□□ 0.6
SF1-203ENST00000377387 ALDH18A1P54886 795 aaKnown RBP18.8■□□□□ 0.6
SF1-203ENST00000377387 THOC5Q13769 683 aaKnown RBP18.8■□□□□ 0.6
SF1-203ENST00000377387 BLMHQ13867 455 aa18.8■□□□□ 0.6
SF1-203ENST00000377387 TMEM132DQ14C87 1099 aa18.8■□□□□ 0.6
SF1-203ENST00000377387 C16orf46Q6P387 395 aa18.8■□□□□ 0.6
SF1-203ENST00000377387 UNC5AQ6ZN44 842 aa18.8■□□□□ 0.6
SF1-203ENST00000377387 ILDR2Q71H61 639 aa18.8■□□□□ 0.6
SF1-203ENST00000377387 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.8■□□□□ 0.64e-7■■□□□ 12.4
SF1-203ENST00000377387 SLC16A10Q8TF71 515 aa18.8■□□□□ 0.6
SF1-203ENST00000377387 FAM161BQ96MY7 647 aa18.8■□□□□ 0.6
SF1-203ENST00000377387 C20orf27Q9GZN8 174 aa18.8■□□□□ 0.6
SF1-203ENST00000377387 DHX35Q9H5Z1 703 aaKnown RBP18.8■□□□□ 0.6
SF1-203ENST00000377387 ELP3Q9H9T3 547 aa18.8■□□□□ 0.6
SF1-203ENST00000377387 SOCS7O14512 581 aa18.8■□□□□ 0.6
SF1-203ENST00000377387 DDNO94850 711 aaPredicted RBP18.8■□□□□ 0.6
SF1-203ENST00000377387 INSRRP14616 1297 aa18.8■□□□□ 0.6
SF1-203ENST00000377387 PGM1P36871 562 aa18.8■□□□□ 0.6
SF1-203ENST00000377387 CHSY1Q86X52 802 aa18.8■□□□□ 0.6
SF1-203ENST00000377387 TREML1Q86YW5 311 aa18.8■□□□□ 0.6
SF1-203ENST00000377387 CLEC4CQ8WTT0 213 aa18.8■□□□□ 0.6
SF1-203ENST00000377387 CEP41Q9BYV8 373 aa18.8■□□□□ 0.6
SF1-203ENST00000377387 TXNRD2Q9NNW7 524 aa18.8■□□□□ 0.6
SF1-203ENST00000377387 NMRK1Q9NWW6 199 aa18.8■□□□□ 0.6
SF1-203ENST00000377387 CNTN3Q9P232 1028 aa18.8■□□□□ 0.6
SF1-203ENST00000377387 BARX2Q9UMQ3 279 aaPredicted RBP18.8■□□□□ 0.6
SF1-203ENST00000377387 MFHAS1Q9Y4C4 1052 aa18.8■□□□□ 0.6
SF1-203ENST00000377387 IRF6O14896 467 aa18.79■□□□□ 0.6
SF1-203ENST00000377387 PFKMP08237 780 aa18.79■□□□□ 0.6
SF1-203ENST00000377387 ARF4P18085 180 aaPredicted RBP18.79■□□□□ 0.6
SF1-203ENST00000377387 SDC4P31431 198 aa18.79■□□□□ 0.6
SF1-203ENST00000377387 AQP5P55064 265 aa18.79■□□□□ 0.6
SF1-203ENST00000377387 SNX30Q5VWJ9 437 aa18.79■□□□□ 0.6
SF1-203ENST00000377387 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.79■□□□□ 0.62e-6■■■■□ 21.6
SF1-203ENST00000377387 ENDOVQ8N8Q3 282 aaKnown RBP18.79■□□□□ 0.6
SF1-203ENST00000377387 PHACTR1Q9C0D0 580 aa18.79■□□□□ 0.6
SF1-203ENST00000377387 TLE6Q9H808 572 aa18.79■□□□□ 0.6
SF1-203ENST00000377387 PLLPQ9Y342 182 aa18.79■□□□□ 0.6
SF1-203ENST00000377387 SNX9Q9Y5X1 595 aa18.79■□□□□ 0.6
SF1-203ENST00000377387 SLC15A5A6NIM6 579 aa18.79■□□□□ 0.6
SF1-203ENST00000377387 ENDOD1O94919 500 aa18.79■□□□□ 0.6
SF1-203ENST00000377387 HSF5Q4G112 596 aaPredicted RBP18.79■□□□□ 0.6
SF1-203ENST00000377387 STMN2Q93045 179 aa18.79■□□□□ 0.6
SF1-203ENST00000377387 KIF12Q96FN5 646 aa18.79■□□□□ 0.6
SF1-203ENST00000377387 MMP19Q99542 508 aa18.79■□□□□ 0.6
SF1-203ENST00000377387 NT5C1AQ9BXI3 368 aa18.79■□□□□ 0.6
SF1-203ENST00000377387 DPP3Q9NY33 737 aa18.79■□□□□ 0.6
SF1-203ENST00000377387 GPRC5DQ9NZD1 345 aa18.79■□□□□ 0.6
SF1-203ENST00000377387 IL1RAPL1Q9NZN1 696 aa18.79■□□□□ 0.6
SF1-203ENST00000377387 SMAPO00193 183 aa18.78■□□□□ 0.6
SF1-203ENST00000377387 PPEF2O14830 753 aa18.78■□□□□ 0.6
SF1-203ENST00000377387 RFPL1O75677 317 aa18.78■□□□□ 0.6
SF1-203ENST00000377387 P4HA1P13674 534 aa18.78■□□□□ 0.6
SF1-203ENST00000377387 ACAP1Q15027 740 aa18.78■□□□□ 0.6
SF1-203ENST00000377387 NBPF20Q3BBV1 942 aa18.78■□□□□ 0.6
SF1-203ENST00000377387 EP400NLQ6ZTU2 488 aa18.78■□□□□ 0.6
SF1-203ENST00000377387 TEX9Q8N6V9 391 aa18.78■□□□□ 0.6
SF1-203ENST00000377387 CXorf38Q8TB03 319 aa18.78■□□□□ 0.6
SF1-203ENST00000377387 NRG4Q8WWG1 115 aa18.78■□□□□ 0.6
SF1-203ENST00000377387 PDZD7Q9H5P4 517 aa18.78■□□□□ 0.6
SF1-203ENST00000377387 NVLO15381 856 aaKnown RBP18.78■□□□□ 0.6
SF1-203ENST00000377387 LUC7L3O95232 432 aaKnown RBP18.78■□□□□ 0.6
SF1-203ENST00000377387 APOEP02649 317 aa18.78■□□□□ 0.6
SF1-203ENST00000377387 C1QAP02745 245 aa18.78■□□□□ 0.6
SF1-203ENST00000377387 AMPD1P23109 780 aa18.78■□□□□ 0.6
SF1-203ENST00000377387 GMPRP36959 345 aa18.78■□□□□ 0.6
SF1-203ENST00000377387 TUBP50607 506 aa18.78■□□□□ 0.6
SF1-203ENST00000377387 MXRA7P84157 204 aa18.78■□□□□ 0.6
SF1-203ENST00000377387 SLC10A2Q12908 348 aaPredicted RBP18.78■□□□□ 0.6
SF1-203ENST00000377387 TSNAXIP1Q2TAA8 658 aa18.78■□□□□ 0.6
SF1-203ENST00000377387 PPP1R14CQ8TAE6 165 aa18.78■□□□□ 0.6
SF1-203ENST00000377387 MRPL45Q9BRJ2 306 aaKnown RBP18.78■□□□□ 0.6
SF1-203ENST00000377387 SMARCAD1Q9H4L7 1026 aa18.78■□□□□ 0.6
SF1-203ENST00000377387 SYNJ2BP-COX16A0A087WUM0 186 aa18.77■□□□□ 0.6
SF1-203ENST00000377387 DPPA5A6NC42 116 aa18.77■□□□□ 0.6
SF1-203ENST00000377387 GAS2O43903 313 aaKnown RBP18.77■□□□□ 0.6
SF1-203ENST00000377387 TBX10O75333 385 aa18.77■□□□□ 0.6
SF1-203ENST00000377387 ATP6V1C1P21283 382 aa18.77■□□□□ 0.6
SF1-203ENST00000377387 CYP2F1P24903 491 aa18.77■□□□□ 0.6
SF1-203ENST00000377387 PLPPR4Q7Z2D5 763 aa18.77■□□□□ 0.6
SF1-203ENST00000377387 TTC30AQ86WT1 665 aa18.77■□□□□ 0.6
SF1-203ENST00000377387 DEPDC1BQ8WUY9 529 aa18.77■□□□□ 0.6
SF1-203ENST00000377387 UCMAQ8WVF2 138 aa18.77■□□□□ 0.6
SF1-203ENST00000377387 NLRP7Q8WX94 980 aa18.77■□□□□ 0.6
SF1-203ENST00000377387 COX16Q9P0S2 106 aa18.77■□□□□ 0.6
SF1-203ENST00000377387 ZFATQ9P243 1243 aa18.77■□□□□ 0.6
SF1-203ENST00000377387 STOML1Q9UBI4 398 aa18.77■□□□□ 0.6
SF1-203ENST00000377387 WASF2Q9Y6W5 498 aa18.77■□□□□ 0.6
SF1-203ENST00000377387 PHKA2P46019 1235 aa18.77■□□□□ 0.6
SF1-203ENST00000377387 CCNHP51946 323 aaPredicted RBP18.77■□□□□ 0.6
SF1-203ENST00000377387 TMEM62Q0P6H9 643 aa18.77■□□□□ 0.6
SF1-203ENST00000377387 GLRA4Q5JXX5 417 aa18.77■□□□□ 0.6
SF1-203ENST00000377387 LGSNQ5TDP6 509 aa18.77■□□□□ 0.6
SF1-203ENST00000377387 LMNTD2Q8IXW0 634 aa18.77■□□□□ 0.6
SF1-203ENST00000377387 SLC25A41Q8N5S1 370 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms