RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 DCLK3Q9C098 648 aa12.6□□□□□ -0.39
C9orf3-203ENST00000375315 C1orf21Q9H246 121 aa12.6□□□□□ -0.39
C9orf3-203ENST00000375315 ZNF696Q9H7X3 374 aa12.6□□□□□ -0.39
C9orf3-203ENST00000375315 XPNPEP1Q9NQW7 623 aa12.6□□□□□ -0.39
C9orf3-203ENST00000375315 AGPAT3Q9NRZ7 376 aa12.6□□□□□ -0.39
C9orf3-203ENST00000375315 TBC1D23Q9NUY8 699 aa12.6□□□□□ -0.39
C9orf3-203ENST00000375315 RSL24D1Q9UHA3 163 aaKnown RBP12.6□□□□□ -0.39
C9orf3-203ENST00000375315 POLIQ9UNA4 740 aa12.6□□□□□ -0.39
C9orf3-203ENST00000375315 CAPN14A8MX76 684 aa12.59□□□□□ -0.39
C9orf3-203ENST00000375315 HNRNPDLO14979 420 aaKnown RBP12.59□□□□□ -0.39
C9orf3-203ENST00000375315 ZBED1O96006 694 aa12.59□□□□□ -0.39
C9orf3-203ENST00000375315 CDH2P19022 906 aaPredicted RBP12.59□□□□□ -0.39
C9orf3-203ENST00000375315 SERPINB6P35237 376 aa12.59□□□□□ -0.39
C9orf3-203ENST00000375315 OSTNP61366 133 aa12.59□□□□□ -0.39
C9orf3-203ENST00000375315 NOP14P78316 857 aaKnown RBP12.59□□□□□ -0.39
C9orf3-203ENST00000375315 DLG4P78352 724 aa12.59□□□□□ -0.39
C9orf3-203ENST00000375315 BCL2A1Q16548 175 aa12.59□□□□□ -0.39
C9orf3-203ENST00000375315 ARHGAP44Q17R89 818 aa12.59□□□□□ -0.39
C9orf3-203ENST00000375315 CCDC153Q494R4 210 aa12.59□□□□□ -0.39
C9orf3-203ENST00000375315 XRRA1Q6P2D8 792 aa12.59□□□□□ -0.39
C9orf3-203ENST00000375315 SAPCD2Q86UD0 394 aa12.59□□□□□ -0.39
C9orf3-203ENST00000375315 ALYREFQ86V81 257 aaKnown RBP12.59□□□□□ -0.39
C9orf3-203ENST00000375315 SLC7A3Q8WY07 619 aa12.59□□□□□ -0.39
C9orf3-203ENST00000375315 BIRC8Q96P09 236 aa12.59□□□□□ -0.39
C9orf3-203ENST00000375315 SELENONQ9NZV5 590 aa12.59□□□□□ -0.39
C9orf3-203ENST00000375315 CCDC162PA2VCL2 907 aa12.59□□□□□ -0.39
C9orf3-203ENST00000375315 COL6A2P12110 1019 aa12.59□□□□□ -0.39
C9orf3-203ENST00000375315 PDAP1Q13442 181 aaKnown RBP12.59□□□□□ -0.39
C9orf3-203ENST00000375315 TLR1Q15399 786 aa12.59□□□□□ -0.39
C9orf3-203ENST00000375315 ZNF276Q8N554 614 aa12.59□□□□□ -0.39
C9orf3-203ENST00000375315 NPLOC4Q8TAT6 608 aa12.59□□□□□ -0.39
C9orf3-203ENST00000375315 ZNF564Q8TBZ8 553 aaPredicted RBP12.59□□□□□ -0.39
C9orf3-203ENST00000375315 ZBTB45Q96K62 511 aaPredicted RBP12.59□□□□□ -0.39
C9orf3-203ENST00000375315 PARK7Q99497 189 aaKnown RBP12.59□□□□□ -0.39
C9orf3-203ENST00000375315 RRN3Q9NYV6 651 aa12.59□□□□□ -0.39
C9orf3-203ENST00000375315 FRMD4BQ9Y2L6 1034 aa12.59□□□□□ -0.39
C9orf3-203ENST00000375315 PAPPA2Q9BXP8 1791 aa12.58□□□□□ -0.39
C9orf3-203ENST00000375315 C2orf71A6NGG8 1288 aa12.58□□□□□ -0.4
C9orf3-203ENST00000375315 GCLMP48507 274 aa12.58□□□□□ -0.4
C9orf3-203ENST00000375315 CLCN3P51790 818 aa12.58□□□□□ -0.4
C9orf3-203ENST00000375315 EMC2Q15006 297 aa12.58□□□□□ -0.4
C9orf3-203ENST00000375315 INAQ16352 499 aa12.58□□□□□ -0.4
C9orf3-203ENST00000375315 XKR3Q5GH77 459 aa12.58□□□□□ -0.4
C9orf3-203ENST00000375315 MDH1BQ5I0G3 518 aa12.58□□□□□ -0.4
C9orf3-203ENST00000375315 SLC2A7Q6PXP3 512 aa12.58□□□□□ -0.4
C9orf3-203ENST00000375315 ZBTB33Q86T24 672 aa12.58□□□□□ -0.4
C9orf3-203ENST00000375315 PYROXD1Q8WU10 500 aa12.58□□□□□ -0.4
C9orf3-203ENST00000375315 POMGNT1Q8WZA1 660 aa12.58□□□□□ -0.4
C9orf3-203ENST00000375315 ZMAT2Q96NC0 199 aaKnown RBP12.58□□□□□ -0.4
C9orf3-203ENST00000375315 OSBPL6Q9BZF3 934 aa12.58□□□□□ -0.4
C9orf3-203ENST00000375315 ALG13Q9NP73 1137 aaKnown RBP12.58□□□□□ -0.4
C9orf3-203ENST00000375315 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.58□□□□□ -0.4
C9orf3-203ENST00000375315 KCNK4Q9NYG8 393 aa12.58□□□□□ -0.4
C9orf3-203ENST00000375315 UBAP1Q9NZ09 502 aa12.58□□□□□ -0.4
C9orf3-203ENST00000375315 SOX13Q9UN79 622 aa12.58□□□□□ -0.4
C9orf3-203ENST00000375315 PTPRFP10586 1907 aa12.58□□□□□ -0.4
C9orf3-203ENST00000375315 TTLL13PA6NNM8 815 aa12.58□□□□□ -0.4
C9orf3-203ENST00000375315 H3BSA7 217 aa12.58□□□□□ -0.4
C9orf3-203ENST00000375315 CASQ2O14958 399 aaPredicted RBP12.58□□□□□ -0.4
C9orf3-203ENST00000375315 DYNC1LI2O43237 492 aaPredicted RBP12.58□□□□□ -0.4
C9orf3-203ENST00000375315 ATMINO43313 823 aaPredicted RBP12.58□□□□□ -0.4
C9orf3-203ENST00000375315 S100A1P23297 94 aa12.58□□□□□ -0.4
C9orf3-203ENST00000375315 NFKBIAP25963 317 aa12.58□□□□□ -0.4
C9orf3-203ENST00000375315 NUP107P57740 925 aa12.58□□□□□ -0.4
C9orf3-203ENST00000375315 ZNF200P98182 395 aaPredicted RBP12.58□□□□□ -0.4
C9orf3-203ENST00000375315 CENPCQ03188 943 aa12.58□□□□□ -0.4
C9orf3-203ENST00000375315 TTLL4Q14679 1199 aa12.58□□□□□ -0.4
C9orf3-203ENST00000375315 RGMBQ6NW40 437 aa12.58□□□□□ -0.4
C9orf3-203ENST00000375315 DHRS4L2Q6PKH6 230 aa12.58□□□□□ -0.4
C9orf3-203ENST00000375315 POTEHQ6S545 545 aa12.58□□□□□ -0.4
C9orf3-203ENST00000375315 STXBP4Q6ZWJ1 553 aa12.58□□□□□ -0.4
C9orf3-203ENST00000375315 PRPF39Q86UA1 669 aaKnown RBP12.58□□□□□ -0.4
C9orf3-203ENST00000375315 RHPN2Q8IUC4 686 aa12.58□□□□□ -0.4
C9orf3-203ENST00000375315 RIN3Q8TB24 985 aa12.58□□□□□ -0.4
C9orf3-203ENST00000375315 PRPF18Q99633 342 aaKnown RBP12.58□□□□□ -0.4
C9orf3-203ENST00000375315 CCT7Q99832 543 aa12.58□□□□□ -0.4
C9orf3-203ENST00000375315 RNPEPQ9H4A4 650 aa12.58□□□□□ -0.4
C9orf3-203ENST00000375315 OLFML3Q9NRN5 406 aa12.58□□□□□ -0.4
C9orf3-203ENST00000375315 APEX2Q9UBZ4 518 aa12.58□□□□□ -0.4
C9orf3-203ENST00000375315 COQ6Q9Y2Z9 468 aa12.58□□□□□ -0.4
C9orf3-203ENST00000375315 HTTP42858 3142 aa12.57□□□□□ -0.4
C9orf3-203ENST00000375315 ADCY6O43306 1168 aa12.57□□□□□ -0.4
C9orf3-203ENST00000375315 STIP1P31948 543 aaKnown RBP12.57□□□□□ -0.4
C9orf3-203ENST00000375315 PFKPQ01813 784 aa12.57□□□□□ -0.4
C9orf3-203ENST00000375315 PRKD1Q15139 912 aaPredicted RBP12.57□□□□□ -0.4
C9orf3-203ENST00000375315 RABGAP1LQ5R372 815 aa12.57□□□□□ -0.4
C9orf3-203ENST00000375315 METTL7BQ6UX53 244 aa12.57□□□□□ -0.4
C9orf3-203ENST00000375315 CAPN12Q6ZSI9 719 aa12.57□□□□□ -0.4
C9orf3-203ENST00000375315 CHSY1Q86X52 802 aa12.57□□□□□ -0.4
C9orf3-203ENST00000375315 RASAL3Q86YV0 1011 aa12.57□□□□□ -0.4
C9orf3-203ENST00000375315 CBWD2Q8IUF1 395 aa12.57□□□□□ -0.4
C9orf3-203ENST00000375315 PSPC1Q8WXF1 523 aaKnown RBP12.57□□□□□ -0.4
C9orf3-203ENST00000375315 NUP85Q9BW27 656 aa12.57□□□□□ -0.4
C9orf3-203ENST00000375315 ADAM33Q9BZ11 813 aa12.57□□□□□ -0.4
C9orf3-203ENST00000375315 WWP1Q9H0M0 922 aa12.57□□□□□ -0.4
C9orf3-203ENST00000375315 TRIM17Q9Y577 477 aa12.57□□□□□ -0.4
C9orf3-203ENST00000375315 CEPT1Q9Y6K0 416 aa12.57□□□□□ -0.4
C9orf3-203ENST00000375315 FAM237BA0A1B0GVD1 139 aa12.57□□□□□ -0.4
C9orf3-203ENST00000375315 AOC2O75106 756 aa12.57□□□□□ -0.4
C9orf3-203ENST00000375315 CD48P09326 243 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms