RNA–Protein interactions for RNA: ENST00000374346.7

PTPN20-204, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 2,481 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-204ENST00000374346 CCDC14Q49A88 953 aa11.83□□□□□ -0.52
PTPN20-204ENST00000374346 ACSBG2Q5FVE4 666 aa11.83□□□□□ -0.52
PTPN20-204ENST00000374346 CYP4V2Q6ZWL3 525 aaPredicted RBP11.83□□□□□ -0.52
PTPN20-204ENST00000374346 ARCQ7LC44 396 aa11.83□□□□□ -0.52
PTPN20-204ENST00000374346 CAND1Q86VP6 1230 aaKnown RBP11.83□□□□□ -0.52
PTPN20-204ENST00000374346 ZDHHC17Q8IUH5 632 aa11.83□□□□□ -0.52
PTPN20-204ENST00000374346 ARID3BQ8IVW6 561 aaPredicted RBP11.83□□□□□ -0.52
PTPN20-204ENST00000374346 PPP1R14CQ8TAE6 165 aa11.83□□□□□ -0.52
PTPN20-204ENST00000374346 FAM172AQ8WUF8 416 aa11.83□□□□□ -0.52
PTPN20-204ENST00000374346 ZNF668Q96K58 619 aaPredicted RBP11.83□□□□□ -0.52
PTPN20-204ENST00000374346 NMRK1Q9NWW6 199 aa11.83□□□□□ -0.52
PTPN20-204ENST00000374346 SIRPGQ9P1W8 387 aa11.83□□□□□ -0.52
PTPN20-204ENST00000374346 PPARGC1AQ9UBK2 798 aaKnown RBP11.83□□□□□ -0.52
PTPN20-204ENST00000374346 ANGPTL2Q9UKU9 493 aa11.83□□□□□ -0.52
PTPN20-204ENST00000374346 SORCS3Q9UPU3 1222 aa11.83□□□□□ -0.52
PTPN20-204ENST00000374346 C2CD2Q9Y426 696 aa11.83□□□□□ -0.52
PTPN20-204ENST00000374346 B2RBV5 119 aa11.82□□□□□ -0.52
PTPN20-204ENST00000374346 H3BRJ5 948 aa11.82□□□□□ -0.52
PTPN20-204ENST00000374346 SKAP2O75563 359 aaPredicted RBP11.82□□□□□ -0.52
PTPN20-204ENST00000374346 GRAP2O75791 330 aa11.82□□□□□ -0.52
PTPN20-204ENST00000374346 STAU1O95793 577 aaKnown RBP11.82□□□□□ -0.52
PTPN20-204ENST00000374346 SLC25A27O95847 323 aa11.82□□□□□ -0.52
PTPN20-204ENST00000374346 SETSIPP0DME0 302 aa11.82□□□□□ -0.52
PTPN20-204ENST00000374346 CLCN3P51790 818 aa11.82□□□□□ -0.52
PTPN20-204ENST00000374346 RAP1GDS1P52306 607 aa11.82□□□□□ -0.52
PTPN20-204ENST00000374346 LBRQ14739 615 aaKnown RBP11.82□□□□□ -0.52
PTPN20-204ENST00000374346 TREML2Q5T2D2 321 aa11.82□□□□□ -0.52
PTPN20-204ENST00000374346 ANO7Q6IWH7 933 aa11.82□□□□□ -0.52
PTPN20-204ENST00000374346 IRGCQ6NXR0 463 aa11.82□□□□□ -0.52
PTPN20-204ENST00000374346 LRRC74BQ6ZQY2 392 aa11.82□□□□□ -0.52
PTPN20-204ENST00000374346 SESTD1Q86VW0 696 aa11.82□□□□□ -0.52
PTPN20-204ENST00000374346 NDUFAF2Q8N183 169 aa11.82□□□□□ -0.52
PTPN20-204ENST00000374346 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.82□□□□□ -0.52
PTPN20-204ENST00000374346 DEPDC1BQ8WUY9 529 aa11.82□□□□□ -0.52
PTPN20-204ENST00000374346 ZNF333Q96JL9 665 aa11.82□□□□□ -0.52
PTPN20-204ENST00000374346 EBNA1BP2Q99848 306 aaKnown RBP11.82□□□□□ -0.52
PTPN20-204ENST00000374346 GBA2Q9HCG7 927 aaPredicted RBP11.82□□□□□ -0.52
PTPN20-204ENST00000374346 PCDH18Q9HCL0 1135 aa11.82□□□□□ -0.52
PTPN20-204ENST00000374346 ERAP1Q9NZ08 941 aa11.82□□□□□ -0.52
PTPN20-204ENST00000374346 HESX1Q9UBX0 185 aa11.82□□□□□ -0.52
PTPN20-204ENST00000374346 TAGLN3Q9UI15 199 aa11.82□□□□□ -0.52
PTPN20-204ENST00000374346 A0A0G2JMZ2 1700 aa11.82□□□□□ -0.52
PTPN20-204ENST00000374346 SPECC1L-ADORA2AF8WAN1 911 aa11.82□□□□□ -0.52
PTPN20-204ENST00000374346 NFKBIEO00221 500 aa11.82□□□□□ -0.52
PTPN20-204ENST00000374346 PIK3R2O00459 728 aa11.82□□□□□ -0.52
PTPN20-204ENST00000374346 MAP3K7O43318 606 aa11.82□□□□□ -0.52
PTPN20-204ENST00000374346 RFPL1O75677 317 aa11.82□□□□□ -0.52
PTPN20-204ENST00000374346 GJB1P08034 283 aa11.82□□□□□ -0.52
PTPN20-204ENST00000374346 PDHA1P08559 390 aa11.82□□□□□ -0.52
PTPN20-204ENST00000374346 IL4RP24394 825 aa11.82□□□□□ -0.52
PTPN20-204ENST00000374346 GCLCP48506 637 aaPredicted RBP11.82□□□□□ -0.52
PTPN20-204ENST00000374346 IRX1P78414 480 aaPredicted RBP11.82□□□□□ -0.52
PTPN20-204ENST00000374346 MRPS5P82675 430 aaKnown RBP11.82□□□□□ -0.52
PTPN20-204ENST00000374346 SLC6A3Q01959 620 aa11.82□□□□□ -0.52
PTPN20-204ENST00000374346 PPP6R3Q5H9R7 873 aaPredicted RBP11.82□□□□□ -0.52
PTPN20-204ENST00000374346 FAXCQ5TGI0 409 aa11.82□□□□□ -0.52
PTPN20-204ENST00000374346 KYAT3Q6YP21 454 aaKnown RBP11.82□□□□□ -0.52
PTPN20-204ENST00000374346 UNC5AQ6ZN44 842 aa11.82□□□□□ -0.52
PTPN20-204ENST00000374346 CDHR3Q6ZTQ4 885 aa11.82□□□□□ -0.52
PTPN20-204ENST00000374346 WDR75Q8IWA0 830 aaKnown RBP11.82□□□□□ -0.52
PTPN20-204ENST00000374346 PQLC3Q8N755 202 aa11.82□□□□□ -0.52
PTPN20-204ENST00000374346 TRAPPC12Q8WVT3 735 aa11.82□□□□□ -0.52
PTPN20-204ENST00000374346 CDKL2Q92772 493 aa11.82□□□□□ -0.52
PTPN20-204ENST00000374346 RILPQ96NA2 401 aa11.82□□□□□ -0.52
PTPN20-204ENST00000374346 FERMT1Q9BQL6 677 aa11.82□□□□□ -0.52
PTPN20-204ENST00000374346 MINDY3Q9H8M7 445 aa11.82□□□□□ -0.52
PTPN20-204ENST00000374346 THAP1Q9NVV9 213 aa11.82□□□□□ -0.52
PTPN20-204ENST00000374346 DPP3Q9NY33 737 aa11.82□□□□□ -0.52
PTPN20-204ENST00000374346 ARMCX1Q9P291 453 aa11.82□□□□□ -0.52
PTPN20-204ENST00000374346 LRRC37A2A6NM11 1700 aa11.82□□□□□ -0.52
PTPN20-204ENST00000374346 CXorf49A8MYA2 514 aaPredicted RBP11.81□□□□□ -0.52
PTPN20-204ENST00000374346 FZD9O00144 591 aa11.81□□□□□ -0.52
PTPN20-204ENST00000374346 GCATO75600 419 aa11.81□□□□□ -0.52
PTPN20-204ENST00000374346 ARIH2O95376 493 aa11.81□□□□□ -0.52
PTPN20-204ENST00000374346 STX3Q13277 289 aa11.81□□□□□ -0.52
PTPN20-204ENST00000374346 GOLGA7BQ2TAP0 167 aa11.81□□□□□ -0.52
PTPN20-204ENST00000374346 ZNF484Q5JVG2 852 aa11.81□□□□□ -0.52
PTPN20-204ENST00000374346 MAP1SQ66K74 1059 aaPredicted RBP11.81□□□□□ -0.52
PTPN20-204ENST00000374346 CYS1Q717R9 158 aa11.81□□□□□ -0.52
PTPN20-204ENST00000374346 NET1Q7Z628 596 aaPredicted RBP11.81□□□□□ -0.52
PTPN20-204ENST00000374346 ALYREFQ86V81 257 aaKnown RBP11.81□□□□□ -0.52
PTPN20-204ENST00000374346 PCDH19Q8TAB3 1148 aa11.81□□□□□ -0.52
PTPN20-204ENST00000374346 CXorf38Q8TB03 319 aa11.81□□□□□ -0.52
PTPN20-204ENST00000374346 SCG3Q8WXD2 468 aaKnown RBP11.81□□□□□ -0.52
PTPN20-204ENST00000374346 FAM161BQ96MY7 647 aa11.81□□□□□ -0.52
PTPN20-204ENST00000374346 SNRNP25Q9BV90 132 aaKnown RBP11.81□□□□□ -0.52
PTPN20-204ENST00000374346 ASCC2Q9H1I8 757 aaPredicted RBP11.81□□□□□ -0.52
PTPN20-204ENST00000374346 FAM96AQ9H5X1 160 aa11.81□□□□□ -0.52
PTPN20-204ENST00000374346 NRDE2Q9H7Z3 1164 aa11.81□□□□□ -0.52
PTPN20-204ENST00000374346 PCMTD2Q9NV79 361 aa11.81□□□□□ -0.52
PTPN20-204ENST00000374346 GGA3Q9NZ52 723 aa11.81□□□□□ -0.52
PTPN20-204ENST00000374346 PCDHA11Q9Y5I1 949 aa11.81□□□□□ -0.52
PTPN20-204ENST00000374346 CITO14578 2027 aa11.81□□□□□ -0.52
PTPN20-204ENST00000374346 PTPRFP10586 1907 aa11.81□□□□□ -0.52
PTPN20-204ENST00000374346 C2orf71A6NGG8 1288 aa11.81□□□□□ -0.52
PTPN20-204ENST00000374346 FAM159BA6NKW6 160 aa11.81□□□□□ -0.52
PTPN20-204ENST00000374346 CAPN14A8MX76 684 aa11.81□□□□□ -0.52
PTPN20-204ENST00000374346 KRT36O76013 467 aa11.81□□□□□ -0.52
PTPN20-204ENST00000374346 ITGBL1O95965 494 aaPredicted RBP11.81□□□□□ -0.52
PTPN20-204ENST00000374346 C1QAP02745 245 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms