RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 RBP3P10745 1247 aa17.58■□□□□ 0.4
PTPN20-203ENST00000374342 CYP2F1P24903 491 aa17.58■□□□□ 0.4
PTPN20-203ENST00000374342 L1CAMP32004 1257 aa17.58■□□□□ 0.4
PTPN20-203ENST00000374342 RDXP35241 583 aaKnown RBP17.58■□□□□ 0.4
PTPN20-203ENST00000374342 NME3Q13232 169 aa17.58■□□□□ 0.4
PTPN20-203ENST00000374342 KCTD16Q68DU8 428 aa17.58■□□□□ 0.4
PTPN20-203ENST00000374342 ZC3H18Q86VM9 953 aaKnown RBP17.58■□□□□ 0.4
PTPN20-203ENST00000374342 VSIG1Q86XK7 387 aa17.58■□□□□ 0.4
PTPN20-203ENST00000374342 SPATA2LQ8IUW3 424 aaPredicted RBP17.58■□□□□ 0.4
PTPN20-203ENST00000374342 SH2D3CQ8N5H7 860 aa17.58■□□□□ 0.4
PTPN20-203ENST00000374342 PLD5Q8N7P1 536 aa17.58■□□□□ 0.4
PTPN20-203ENST00000374342 PCDH19Q8TAB3 1148 aa17.58■□□□□ 0.4
PTPN20-203ENST00000374342 FAM76AQ8TAV0 307 aa17.58■□□□□ 0.4
PTPN20-203ENST00000374342 FAF2Q96CS3 445 aa17.58■□□□□ 0.4
PTPN20-203ENST00000374342 MAGEB5Q9BZ81 275 aa17.58■□□□□ 0.4
PTPN20-203ENST00000374342 HIPK3Q9H422 1215 aa17.58■□□□□ 0.4
PTPN20-203ENST00000374342 LTFP02788 710 aa17.57■□□□□ 0.4
PTPN20-203ENST00000374342 RARGP13631 454 aa17.57■□□□□ 0.4
PTPN20-203ENST00000374342 TGM2P21980 687 aa17.57■□□□□ 0.4
PTPN20-203ENST00000374342 CCL23P55773 120 aa17.57■□□□□ 0.4
PTPN20-203ENST00000374342 DEUP1Q05D60 604 aa17.57■□□□□ 0.4
PTPN20-203ENST00000374342 SLC9A4Q6AI14 798 aa17.57■□□□□ 0.4
PTPN20-203ENST00000374342 HIBCHQ6NVY1 386 aaPredicted RBP17.57■□□□□ 0.4
PTPN20-203ENST00000374342 B4GALNT4Q76KP1 1039 aa17.57■□□□□ 0.4
PTPN20-203ENST00000374342 UNC45BQ8IWX7 931 aa17.57■□□□□ 0.4
PTPN20-203ENST00000374342 SLC7A14Q8TBB6 771 aa17.57■□□□□ 0.4
PTPN20-203ENST00000374342 NT5C3BQ969T7 300 aa17.57■□□□□ 0.4
PTPN20-203ENST00000374342 PWWP2AQ96N64 755 aa17.57■□□□□ 0.4
PTPN20-203ENST00000374342 CDC42EP4Q9H3Q1 356 aaKnown RBP17.57■□□□□ 0.4
PTPN20-203ENST00000374342 FZD10Q9ULW2 581 aa17.57■□□□□ 0.4
PTPN20-203ENST00000374342 HEY1Q9Y5J3 304 aa17.57■□□□□ 0.4
PTPN20-203ENST00000374342 COL4A4P53420 1690 aaPredicted RBP17.57■□□□□ 0.4
PTPN20-203ENST00000374342 ZNF487B1APH4 448 aa17.57■□□□□ 0.4
PTPN20-203ENST00000374342 H7C0C1 242 aa17.57■□□□□ 0.4
PTPN20-203ENST00000374342 TADA2AO75478 443 aa17.57■□□□□ 0.4
PTPN20-203ENST00000374342 SHBGP04278 402 aa17.57■□□□□ 0.4
PTPN20-203ENST00000374342 FYNP06241 537 aa17.57■□□□□ 0.4
PTPN20-203ENST00000374342 ATP5OP48047 213 aa17.57■□□□□ 0.4
PTPN20-203ENST00000374342 SLC39A12Q504Y0 691 aa17.57■□□□□ 0.4
PTPN20-203ENST00000374342 DARS2Q6PI48 645 aaKnown RBP17.57■□□□□ 0.4
PTPN20-203ENST00000374342 C4orf50Q6ZRC1 276 aa17.57■□□□□ 0.4
PTPN20-203ENST00000374342 PYROXD2Q8N2H3 581 aa17.57■□□□□ 0.4
PTPN20-203ENST00000374342 FAM71DQ8N9W8 422 aa17.57■□□□□ 0.4
PTPN20-203ENST00000374342 UHMK1Q8TAS1 419 aaKnown RBP17.57■□□□□ 0.4
PTPN20-203ENST00000374342 ADAM32Q8TC27 787 aa17.57■□□□□ 0.4
PTPN20-203ENST00000374342 CASD1Q96PB1 797 aa17.57■□□□□ 0.4
PTPN20-203ENST00000374342 ADAM7Q9H2U9 754 aa17.57■□□□□ 0.4
PTPN20-203ENST00000374342 NRDE2Q9H7Z3 1164 aa17.57■□□□□ 0.4
PTPN20-203ENST00000374342 TMBIM4Q9HC24 238 aa17.57■□□□□ 0.4
PTPN20-203ENST00000374342 TMPRSS4Q9NRS4 437 aa17.57■□□□□ 0.4
PTPN20-203ENST00000374342 MTMR10Q9NXD2 777 aa17.57■□□□□ 0.4
PTPN20-203ENST00000374342 HCSTQ9UBK5 93 aa17.57■□□□□ 0.4
PTPN20-203ENST00000374342 RIPK2O43353 540 aa17.56■□□□□ 0.4
PTPN20-203ENST00000374342 TRAPPC3O43617 180 aa17.56■□□□□ 0.4
PTPN20-203ENST00000374342 MAP3K6O95382 1288 aa17.56■□□□□ 0.4
PTPN20-203ENST00000374342 NUDT17P0C025 328 aa17.56■□□□□ 0.4
PTPN20-203ENST00000374342 NCAM1P13591 858 aa17.56■□□□□ 0.4
PTPN20-203ENST00000374342 IFRD2Q12894 506 aaPredicted RBP17.56■□□□□ 0.4
PTPN20-203ENST00000374342 SLC29A2Q14542 456 aa17.56■□□□□ 0.4
PTPN20-203ENST00000374342 KRT71Q3SY84 523 aa17.56■□□□□ 0.4
PTPN20-203ENST00000374342 BHLHA9Q7RTU4 235 aa17.56■□□□□ 0.4
PTPN20-203ENST00000374342 BNIPLQ7Z465 357 aa17.56■□□□□ 0.4
PTPN20-203ENST00000374342 ATP6V1G3Q96LB4 118 aa17.56■□□□□ 0.4
PTPN20-203ENST00000374342 TSPYL1Q9H0U9 437 aa17.56■□□□□ 0.4
PTPN20-203ENST00000374342 LRRC4CQ9HCJ2 640 aa17.56■□□□□ 0.4
PTPN20-203ENST00000374342 PIGVQ9NUD9 493 aa17.56■□□□□ 0.4
PTPN20-203ENST00000374342 TPX2Q9ULW0 747 aaKnown RBP17.56■□□□□ 0.4
PTPN20-203ENST00000374342 EIF3BP55884 814 aaKnown RBP17.55■□□□□ 0.4
PTPN20-203ENST00000374342 TRIM60Q495X7 471 aa17.55■□□□□ 0.4
PTPN20-203ENST00000374342 TRMT10CQ7L0Y3 403 aaKnown RBP17.55■□□□□ 0.4
PTPN20-203ENST00000374342 NPAS4Q8IUM7 802 aa17.55■□□□□ 0.4
PTPN20-203ENST00000374342 EDEM1Q92611 657 aa17.55■□□□□ 0.4
PTPN20-203ENST00000374342 CSPG4P5Q96PW8 444 aa17.55■□□□□ 0.4
PTPN20-203ENST00000374342 ABI2Q9NYB9 513 aaPredicted RBP17.55■□□□□ 0.4
PTPN20-203ENST00000374342 ADAM28Q9UKQ2 775 aa17.55■□□□□ 0.4
PTPN20-203ENST00000374342 PLXNA3P51805 1871 aa17.55■□□□□ 0.4
PTPN20-203ENST00000374342 DCDC2CA8MYV0 355 aa17.55■□□□□ 0.4
PTPN20-203ENST00000374342 ACSL3O95573 720 aa17.55■□□□□ 0.4
PTPN20-203ENST00000374342 GOT1P17174 413 aa17.55■□□□□ 0.4
PTPN20-203ENST00000374342 GRIK1P39086 918 aa17.55■□□□□ 0.4
PTPN20-203ENST00000374342 ARL4AP40617 200 aa17.55■□□□□ 0.4
PTPN20-203ENST00000374342 DNAJC21Q5F1R6 531 aaKnown RBP17.55■□□□□ 0.4
PTPN20-203ENST00000374342 SLC39A5Q6ZMH5 540 aa17.55■□□□□ 0.4
PTPN20-203ENST00000374342 ANKRD33Q7Z3H0 272 aa17.55■□□□□ 0.4
PTPN20-203ENST00000374342 DEFB128Q7Z7B8 93 aa17.55■□□□□ 0.4
PTPN20-203ENST00000374342 ZCCHC9Q8N567 271 aaKnown RBP17.55■□□□□ 0.4
PTPN20-203ENST00000374342 TAB3Q8N5C8 712 aaPredicted RBP17.55■□□□□ 0.4
PTPN20-203ENST00000374342 IRGQQ8WZA9 623 aa17.55■□□□□ 0.4
PTPN20-203ENST00000374342 EXOC4Q96A65 974 aa17.55■□□□□ 0.4
PTPN20-203ENST00000374342 ZCWPW1Q9H0M4 648 aa17.55■□□□□ 0.4
PTPN20-203ENST00000374342 PNPLA8Q9NP80 782 aa17.55■□□□□ 0.4
PTPN20-203ENST00000374342 CWC15Q9P013 229 aaKnown RBP17.55■□□□□ 0.4
PTPN20-203ENST00000374342 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.54■□□□□ 0.4
PTPN20-203ENST00000374342 HMGB1P1B2RPK0 211 aaPredicted RBP17.54■□□□□ 0.4
PTPN20-203ENST00000374342 NDC80O14777 642 aa17.54■□□□□ 0.4
PTPN20-203ENST00000374342 HOXA2O43364 376 aa17.54■□□□□ 0.4
PTPN20-203ENST00000374342 CYP2C18P33260 490 aa17.54■□□□□ 0.4
PTPN20-203ENST00000374342 RPL22P35268 128 aaKnown RBP17.54■□□□□ 0.4
PTPN20-203ENST00000374342 TLE2Q04725 743 aa17.54■□□□□ 0.4
PTPN20-203ENST00000374342 FAAP100Q0VG06 881 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms