RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 XAB2Q9HCS7 855 aaKnown RBP13.36□□□□□ -0.27
PRPF4-201ENST00000374198 THAP1Q9NVV9 213 aa13.36□□□□□ -0.27
PRPF4-201ENST00000374198 SCHIP1Q9P0W5 487 aaPredicted RBP13.36□□□□□ -0.27
PRPF4-201ENST00000374198 CDH7Q9ULB5 785 aa13.36□□□□□ -0.27
PRPF4-201ENST00000374198 LOC100653049A0A140TA62 436 aa13.35□□□□□ -0.27
PRPF4-201ENST00000374198 TCRBV9S1A1TA0A576 114 aa13.35□□□□□ -0.27
PRPF4-201ENST00000374198 TRIM49D1C9J1S8 452 aa13.35□□□□□ -0.27
PRPF4-201ENST00000374198 KRT34O76011 436 aa13.35□□□□□ -0.27
PRPF4-201ENST00000374198 CAPNS1P04632 268 aa13.35□□□□□ -0.27
PRPF4-201ENST00000374198 CYP2C9P11712 490 aa13.35□□□□□ -0.27
PRPF4-201ENST00000374198 PRELPP51888 382 aa13.35□□□□□ -0.27
PRPF4-201ENST00000374198 STAT2P52630 851 aa13.35□□□□□ -0.27
PRPF4-201ENST00000374198 YWHAGP61981 247 aaKnown RBP eCLIP13.35□□□□□ -0.27
PRPF4-201ENST00000374198 TUBA4AP68366 448 aa13.35□□□□□ -0.27
PRPF4-201ENST00000374198 PEX6Q13608 980 aa13.35□□□□□ -0.27
PRPF4-201ENST00000374198 ATP1A4Q13733 1029 aa13.35□□□□□ -0.27
PRPF4-201ENST00000374198 ATP13A4Q4VNC1 1196 aa13.35□□□□□ -0.27
PRPF4-201ENST00000374198 TTC39BQ5VTQ0 682 aaPredicted RBP13.35□□□□□ -0.27
PRPF4-201ENST00000374198 ZFP1Q6P2D0 407 aa13.35□□□□□ -0.27
PRPF4-201ENST00000374198 CLVS1Q8IUQ0 354 aaPredicted RBP13.35□□□□□ -0.27
PRPF4-201ENST00000374198 SLC7A5P1Q8MH63 180 aa13.35□□□□□ -0.27
PRPF4-201ENST00000374198 LILRA2Q8N149 483 aa13.35□□□□□ -0.27
PRPF4-201ENST00000374198 GRIN3AQ8TCU5 1115 aa13.35□□□□□ -0.27
PRPF4-201ENST00000374198 NKD2Q969F2 451 aaPredicted RBP13.35□□□□□ -0.27
PRPF4-201ENST00000374198 EME1Q96AY2 570 aa13.35□□□□□ -0.27
PRPF4-201ENST00000374198 TRIM11Q96F44 468 aa13.35□□□□□ -0.27
PRPF4-201ENST00000374198 DRC3Q9H069 523 aa13.35□□□□□ -0.27
PRPF4-201ENST00000374198 GBA3Q9H227 469 aa13.35□□□□□ -0.27
PRPF4-201ENST00000374198 IFT122Q9HBG6 1241 aa13.35□□□□□ -0.27
PRPF4-201ENST00000374198 XPNPEP1Q9NQW7 623 aa13.35□□□□□ -0.27
PRPF4-201ENST00000374198 ZNF277Q9NRM2 450 aaPredicted RBP13.35□□□□□ -0.27
PRPF4-201ENST00000374198 LTBP3Q9NS15 1303 aa13.35□□□□□ -0.27
PRPF4-201ENST00000374198 H3BNH8 94 aa13.35□□□□□ -0.27
PRPF4-201ENST00000374198 ZNF701M0R085 212 aaPredicted RBP13.35□□□□□ -0.27
PRPF4-201ENST00000374198 FAM155BO75949 473 aa13.35□□□□□ -0.27
PRPF4-201ENST00000374198 CALCAP01258 141 aa13.35□□□□□ -0.27
PRPF4-201ENST00000374198 RPS3AP61247 264 aaKnown RBP13.35□□□□□ -0.27
PRPF4-201ENST00000374198 MRPS22P82650 360 aaKnown RBP13.35□□□□□ -0.27
PRPF4-201ENST00000374198 PDE1CQ14123 709 aaPredicted RBP13.35□□□□□ -0.27
PRPF4-201ENST00000374198 SEPT6Q14141 434 aa13.35□□□□□ -0.27
PRPF4-201ENST00000374198 ODR4Q5SWX8 454 aa13.35□□□□□ -0.27
PRPF4-201ENST00000374198 METTL21CQ5VZV1 264 aa13.35□□□□□ -0.27
PRPF4-201ENST00000374198 C16orf87Q6PH81 154 aa13.35□□□□□ -0.27
PRPF4-201ENST00000374198 PDIK1LQ8N165 341 aa13.35□□□□□ -0.27
PRPF4-201ENST00000374198 ATP6V0A1Q93050 837 aa13.35□□□□□ -0.27
PRPF4-201ENST00000374198 C12orf43Q96C57 262 aaKnown RBP13.35□□□□□ -0.27
PRPF4-201ENST00000374198 THAP11Q96EK4 314 aa13.35□□□□□ -0.27
PRPF4-201ENST00000374198 SLITRK1Q96PX8 696 aa13.35□□□□□ -0.27
PRPF4-201ENST00000374198 GCOM2Q9BZD3 368 aaPredicted RBP13.35□□□□□ -0.27
PRPF4-201ENST00000374198 RAB20Q9NX57 234 aa13.35□□□□□ -0.27
PRPF4-201ENST00000374198 GIN1Q9NXP7 522 aa13.35□□□□□ -0.27
PRPF4-201ENST00000374198 STK39Q9UEW8 545 aa13.35□□□□□ -0.27
PRPF4-201ENST00000374198 ARHGAP26Q9UNA1 814 aa13.35□□□□□ -0.27
PRPF4-201ENST00000374198 PSMD12O00232 456 aaPredicted RBP13.34□□□□□ -0.27
PRPF4-201ENST00000374198 ZBTB5O15062 677 aa13.34□□□□□ -0.27
PRPF4-201ENST00000374198 LDHAP00338 332 aaKnown RBP13.34□□□□□ -0.27
PRPF4-201ENST00000374198 C6orf183Q5T699 404 aa13.34□□□□□ -0.27
PRPF4-201ENST00000374198 MFSD7Q6UXD7 560 aa13.34□□□□□ -0.27
PRPF4-201ENST00000374198 SLC51AQ86UW1 340 aa13.34□□□□□ -0.27
PRPF4-201ENST00000374198 IGDCC3Q8IVU1 814 aa13.34□□□□□ -0.27
PRPF4-201ENST00000374198 PIWIL2Q8TC59 973 aaKnown RBP13.34□□□□□ -0.27
PRPF4-201ENST00000374198 HELQQ8TDG4 1101 aa13.34□□□□□ -0.27
PRPF4-201ENST00000374198 SEMA4DQ92854 862 aa13.34□□□□□ -0.27
PRPF4-201ENST00000374198 LENG9Q96B70 501 aa13.34□□□□□ -0.27
PRPF4-201ENST00000374198 WRNIP1Q96S55 665 aa13.34□□□□□ -0.27
PRPF4-201ENST00000374198 HGH1Q9BTY7 390 aa13.34□□□□□ -0.27
PRPF4-201ENST00000374198 SLC13A1Q9BZW2 595 aa13.34□□□□□ -0.27
PRPF4-201ENST00000374198 HIPK3Q9H422 1215 aa13.34□□□□□ -0.27
PRPF4-201ENST00000374198 CAAP1Q9H8G2 361 aa13.34□□□□□ -0.27
PRPF4-201ENST00000374198 EPS15L1Q9UBC2 864 aa13.34□□□□□ -0.27
PRPF4-201ENST00000374198 MYRFQ9Y2G1 1151 aa13.34□□□□□ -0.27
PRPF4-201ENST00000374198 SBF1O95248 1867 aa13.34□□□□□ -0.27
PRPF4-201ENST00000374198 FER1L6Q2WGJ9 1857 aa13.34□□□□□ -0.27
PRPF4-201ENST00000374198 SULT1C4O75897 302 aa13.34□□□□□ -0.27
PRPF4-201ENST00000374198 BPGMP07738 259 aa13.34□□□□□ -0.27
PRPF4-201ENST00000374198 INHBBP09529 407 aa13.34□□□□□ -0.27
PRPF4-201ENST00000374198 NAT1P18440 290 aa13.34□□□□□ -0.27
PRPF4-201ENST00000374198 TXNL4AP83876 142 aaKnown RBP13.34□□□□□ -0.27
PRPF4-201ENST00000374198 ZNF543Q08ER8 600 aa13.34□□□□□ -0.27
PRPF4-201ENST00000374198 ZFYVE27Q5T4F4 411 aa13.34□□□□□ -0.27
PRPF4-201ENST00000374198 TTBK2Q6IQ55 1244 aa13.34□□□□□ -0.27
PRPF4-201ENST00000374198 ZCCHC23Q6ZST2 131 aa13.34□□□□□ -0.27
PRPF4-201ENST00000374198 GPR141Q7Z602 305 aa13.34□□□□□ -0.27
PRPF4-201ENST00000374198 TBC1D15Q8TC07 691 aa13.34□□□□□ -0.27
PRPF4-201ENST00000374198 KBTBD7Q8WVZ9 684 aa13.34□□□□□ -0.27
PRPF4-201ENST00000374198 DHX38Q92620 1227 aaKnown RBP13.34□□□□□ -0.27
PRPF4-201ENST00000374198 CELF1Q92879 486 aaKnown RBP13.34□□□□□ -0.27
PRPF4-201ENST00000374198 FAM20AQ96MK3 541 aa13.34□□□□□ -0.27
PRPF4-201ENST00000374198 ZNF778Q96MU6 729 aa13.34□□□□□ -0.27
PRPF4-201ENST00000374198 ZMAT2Q96NC0 199 aaKnown RBP13.34□□□□□ -0.27
PRPF4-201ENST00000374198 PKP2Q99959 881 aa13.34□□□□□ -0.27
PRPF4-201ENST00000374198 ARPC5LQ9BPX5 153 aa13.34□□□□□ -0.27
PRPF4-201ENST00000374198 VAV3Q9UKW4 847 aa13.34□□□□□ -0.27
PRPF4-201ENST00000374198 CCPG1Q9ULG6 757 aa13.34□□□□□ -0.27
PRPF4-201ENST00000374198 USP17L10C9JJH3 530 aa13.33□□□□□ -0.27
PRPF4-201ENST00000374198 PMM2O15305 246 aa13.33□□□□□ -0.27
PRPF4-201ENST00000374198 ZMPSTE24O75844 475 aa13.33□□□□□ -0.27
PRPF4-201ENST00000374198 BMP10O95393 424 aa13.33□□□□□ -0.27
PRPF4-201ENST00000374198 ESRRBO95718 433 aa13.33□□□□□ -0.27
PRPF4-201ENST00000374198 C8BP07358 591 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms