RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 C11orf70Q9BRQ4 267 aa14.91□□□□□ -0.02
HMGA1-203ENST00000374116 HERC2P3Q9BVR0 1158 aa14.91□□□□□ -0.02
HMGA1-203ENST00000374116 TRIM7Q9C029 511 aa14.91□□□□□ -0.02
HMGA1-203ENST00000374116 SDCBP2Q9H190 292 aa14.91□□□□□ -0.02
HMGA1-203ENST00000374116 CHST7Q9NS84 486 aa14.91□□□□□ -0.02
HMGA1-203ENST00000374116 PARVAQ9NVD7 372 aa14.91□□□□□ -0.02
HMGA1-203ENST00000374116 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.91□□□□□ -0.02
HMGA1-203ENST00000374116 TMEM265A0A087WTH1 108 aa14.9□□□□□ -0.02
HMGA1-203ENST00000374116 HUS1O60921 280 aa14.9□□□□□ -0.02
HMGA1-203ENST00000374116 LSM8O95777 96 aaKnown RBP14.9□□□□□ -0.02
HMGA1-203ENST00000374116 URODP06132 367 aa14.9□□□□□ -0.02
HMGA1-203ENST00000374116 CTSAP10619 480 aa14.9□□□□□ -0.02
HMGA1-203ENST00000374116 MMP8P22894 467 aa14.9□□□□□ -0.02
HMGA1-203ENST00000374116 ACAT1P24752 427 aaKnown RBP14.9□□□□□ -0.02
HMGA1-203ENST00000374116 ARPP19P56211 112 aa14.9□□□□□ -0.02
HMGA1-203ENST00000374116 DSG1Q02413 1049 aa14.9□□□□□ -0.02
HMGA1-203ENST00000374116 ORC1Q13415 861 aa14.9□□□□□ -0.02
HMGA1-203ENST00000374116 CCDC85BQ15834 202 aaPredicted RBP14.9□□□□□ -0.02
HMGA1-203ENST00000374116 ZNF667Q5HYK9 610 aa14.9□□□□□ -0.02
HMGA1-203ENST00000374116 KIAA0319Q5VV43 1072 aa14.9□□□□□ -0.02
HMGA1-203ENST00000374116 PASD1Q8IV76 773 aa14.9□□□□□ -0.02
HMGA1-203ENST00000374116 CACNA2D3Q8IZS8 1091 aa14.9□□□□□ -0.02
HMGA1-203ENST00000374116 ART4Q93070 314 aa14.9□□□□□ -0.02
HMGA1-203ENST00000374116 SEC16BQ96JE7 1060 aa14.9□□□□□ -0.02
HMGA1-203ENST00000374116 LPIN3Q9BQK8 851 aa14.9□□□□□ -0.02
HMGA1-203ENST00000374116 IGFLR1Q9H665 355 aa14.9□□□□□ -0.02
HMGA1-203ENST00000374116 NOD2Q9HC29 1040 aa14.9□□□□□ -0.02
HMGA1-203ENST00000374116 MRPL17Q9NRX2 175 aaKnown RBP14.9□□□□□ -0.02
HMGA1-203ENST00000374116 PCDHGC3Q9UN70 934 aa14.9□□□□□ -0.02
HMGA1-203ENST00000374116 LZTS1Q9Y250 596 aa14.9□□□□□ -0.02
HMGA1-203ENST00000374116 NME7Q9Y5B8 376 aa14.9□□□□□ -0.02
HMGA1-203ENST00000374116 TSC2P49815 1807 aa14.9□□□□□ -0.02
HMGA1-203ENST00000374116 TCRBV5S1A1TA0A578 114 aa14.89□□□□□ -0.03
HMGA1-203ENST00000374116 C2orf71A6NGG8 1288 aa14.89□□□□□ -0.03
HMGA1-203ENST00000374116 SPATA31D3P0C874 917 aa14.89□□□□□ -0.03
HMGA1-203ENST00000374116 LMO2P25791 158 aa14.89□□□□□ -0.03
HMGA1-203ENST00000374116 ELF3P78545 371 aaPredicted RBP14.89□□□□□ -0.03
HMGA1-203ENST00000374116 YWHAHQ04917 246 aaPredicted RBP14.89□□□□□ -0.03
HMGA1-203ENST00000374116 NAA25Q14CX7 972 aa14.89□□□□□ -0.03
HMGA1-203ENST00000374116 PPP1R7Q15435 360 aa14.89□□□□□ -0.03
HMGA1-203ENST00000374116 KCTD19Q17RG1 926 aaPredicted RBP14.89□□□□□ -0.03
HMGA1-203ENST00000374116 AP1ARQ63HQ0 302 aa14.89□□□□□ -0.03
HMGA1-203ENST00000374116 OVOS1Q6IE37 1185 aa14.89□□□□□ -0.03
HMGA1-203ENST00000374116 LLGL2Q6P1M3 1020 aa14.89□□□□□ -0.03
HMGA1-203ENST00000374116 SPATA31D4Q6ZUB0 917 aa14.89□□□□□ -0.03
HMGA1-203ENST00000374116 PHLDB2Q86SQ0 1253 aa14.89□□□□□ -0.03
HMGA1-203ENST00000374116 CROCCP2Q86T23 111 aa14.89□□□□□ -0.03
HMGA1-203ENST00000374116 HOOK3Q86VS8 718 aa14.89□□□□□ -0.03
HMGA1-203ENST00000374116 OSTM1Q86WC4 334 aa14.89□□□□□ -0.03
HMGA1-203ENST00000374116 APPL2Q8NEU8 664 aa14.89□□□□□ -0.03
HMGA1-203ENST00000374116 GRK7Q8WTQ7 553 aa14.89□□□□□ -0.03
HMGA1-203ENST00000374116 MRPL38Q96DV4 380 aaKnown RBP14.89□□□□□ -0.03
HMGA1-203ENST00000374116 ZNF518BQ9C0D4 1074 aa14.89□□□□□ -0.03
HMGA1-203ENST00000374116 MTMR10Q9NXD2 777 aa14.89□□□□□ -0.03
HMGA1-203ENST00000374116 ETAA1Q9NY74 926 aa14.89□□□□□ -0.03
HMGA1-203ENST00000374116 PCDHB8Q9UN66 801 aa14.89□□□□□ -0.03
HMGA1-203ENST00000374116 MTCH2Q9Y6C9 303 aa14.89□□□□□ -0.03
HMGA1-203ENST00000374116 CALB1P05937 261 aa14.89□□□□□ -0.03
HMGA1-203ENST00000374116 CNPP09543 421 aaKnown RBP14.89□□□□□ -0.03
HMGA1-203ENST00000374116 PDGFRBP09619 1106 aa14.89□□□□□ -0.03
HMGA1-203ENST00000374116 ODC1P11926 461 aa14.89□□□□□ -0.03
HMGA1-203ENST00000374116 CD58P19256 250 aa14.89□□□□□ -0.03
HMGA1-203ENST00000374116 ATICP31939 592 aa14.89□□□□□ -0.03
HMGA1-203ENST00000374116 YWHAEP62258 255 aaKnown RBP14.89□□□□□ -0.03
HMGA1-203ENST00000374116 UBE3AQ05086 875 aa14.89□□□□□ -0.03
HMGA1-203ENST00000374116 ELAVL2Q12926 359 aaKnown RBP14.89□□□□□ -0.03
HMGA1-203ENST00000374116 PSMD5Q16401 504 aa14.89□□□□□ -0.03
HMGA1-203ENST00000374116 SPRED3Q2MJR0 410 aa14.89□□□□□ -0.03
HMGA1-203ENST00000374116 KRT71Q3SY84 523 aa14.89□□□□□ -0.03
HMGA1-203ENST00000374116 C2CD6Q53TS8 623 aa14.89□□□□□ -0.03
HMGA1-203ENST00000374116 DENND2CQ68D51 928 aa14.89□□□□□ -0.03
HMGA1-203ENST00000374116 KATNAL2Q8IYT4 538 aa14.89□□□□□ -0.03
HMGA1-203ENST00000374116 ADGRF2Q8IZF7 708 aa14.89□□□□□ -0.03
HMGA1-203ENST00000374116 WDTC1Q8N5D0 677 aa14.89□□□□□ -0.03
HMGA1-203ENST00000374116 MRPL43Q8N983 215 aaKnown RBP14.89□□□□□ -0.03
HMGA1-203ENST00000374116 FEZF2Q8TBJ5 459 aa14.89□□□□□ -0.03
HMGA1-203ENST00000374116 KBTBD7Q8WVZ9 684 aa14.89□□□□□ -0.03
HMGA1-203ENST00000374116 TFAP2BQ92481 460 aa14.89□□□□□ -0.03
HMGA1-203ENST00000374116 EPB41L4BQ9H329 900 aa14.89□□□□□ -0.03
HMGA1-203ENST00000374116 GDAP2Q9NXN4 497 aa14.89□□□□□ -0.03
HMGA1-203ENST00000374116 WHRNQ9P202 907 aa14.89□□□□□ -0.03
HMGA1-203ENST00000374116 HMGXB4Q9UGU5 601 aa14.89□□□□□ -0.03
HMGA1-203ENST00000374116 IP6K2Q9UHH9 426 aa14.89□□□□□ -0.03
HMGA1-203ENST00000374116 C15orf41Q9Y2V0 281 aa14.89□□□□□ -0.03
HMGA1-203ENST00000374116 CDY1Q9Y6F8 540 aa14.89□□□□□ -0.03
HMGA1-203ENST00000374116 C5orf42Q9H799 3197 aa14.89□□□□□ -0.03
HMGA1-203ENST00000374116 CFAP73A6NFT4 308 aa14.88□□□□□ -0.03
HMGA1-203ENST00000374116 TEX28O15482 410 aa14.88□□□□□ -0.03
HMGA1-203ENST00000374116 LILRB3O75022 631 aa14.88□□□□□ -0.03
HMGA1-203ENST00000374116 ALADP13716 330 aa14.88□□□□□ -0.03
HMGA1-203ENST00000374116 KCNJ1P48048 391 aa14.88□□□□□ -0.03
HMGA1-203ENST00000374116 NRIP1P48552 1158 aa14.88□□□□□ -0.03
HMGA1-203ENST00000374116 CALCOCO2Q13137 446 aa14.88□□□□□ -0.03
HMGA1-203ENST00000374116 CTXN3Q4LDR2 81 aa14.88□□□□□ -0.03
HMGA1-203ENST00000374116 OR10T2Q8NGX3 314 aa14.88□□□□□ -0.03
HMGA1-203ENST00000374116 C1orf54Q8WWF1 131 aa14.88□□□□□ -0.03
HMGA1-203ENST00000374116 GAS2L1Q99501 681 aaPredicted RBP14.88□□□□□ -0.03
HMGA1-203ENST00000374116 RTP3Q9BQQ7 232 aa14.88□□□□□ -0.03
HMGA1-203ENST00000374116 CLSTN3Q9BQT9 956 aa14.88□□□□□ -0.03
HMGA1-203ENST00000374116 DCLK3Q9C098 648 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms