RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 S100A1P23297 94 aa13.74□□□□□ -0.21
RAPGEF1-201ENST00000372189 BTNL9Q6UXG8 535 aa13.74□□□□□ -0.21
RAPGEF1-201ENST00000372189 SPATA18Q8TC71 538 aa13.74□□□□□ -0.21
RAPGEF1-201ENST00000372189 GPR63Q9BZJ6 419 aa13.74□□□□□ -0.21
RAPGEF1-201ENST00000372189 ADGRB2O60241 1585 aa13.73□□□□□ -0.21
RAPGEF1-201ENST00000372189 SGPL1O95470 568 aa13.73□□□□□ -0.21
RAPGEF1-201ENST00000372189 CLUP10909 449 aa13.73□□□□□ -0.21
RAPGEF1-201ENST00000372189 MYL4P12829 197 aa13.73□□□□□ -0.21
RAPGEF1-201ENST00000372189 POLD3Q15054 466 aaPredicted RBP13.73□□□□□ -0.21
RAPGEF1-201ENST00000372189 BOLA3Q53S33 107 aa13.73□□□□□ -0.21
RAPGEF1-201ENST00000372189 TRIM65Q6PJ69 517 aa13.73□□□□□ -0.21
RAPGEF1-201ENST00000372189 MFN1Q8IWA4 741 aa13.73□□□□□ -0.21
RAPGEF1-201ENST00000372189 FBXL16Q8N461 479 aa13.73□□□□□ -0.21
RAPGEF1-201ENST00000372189 CYGBQ8WWM9 190 aa13.73□□□□□ -0.21
RAPGEF1-201ENST00000372189 S100PBPQ96BU1 408 aa13.73□□□□□ -0.21
RAPGEF1-201ENST00000372189 PPP1R36Q96LQ0 422 aa13.73□□□□□ -0.21
RAPGEF1-201ENST00000372189 DNAJC7Q99615 494 aa13.73□□□□□ -0.21
RAPGEF1-201ENST00000372189 PAK5Q9P286 719 aa13.73□□□□□ -0.21
RAPGEF1-201ENST00000372189 F9P00740 461 aa13.73□□□□□ -0.21
RAPGEF1-201ENST00000372189 RARRES1P49788 294 aa13.73□□□□□ -0.21
RAPGEF1-201ENST00000372189 PSMC6P62333 389 aa13.73□□□□□ -0.21
RAPGEF1-201ENST00000372189 CCDC85BQ15834 202 aaPredicted RBP13.73□□□□□ -0.21
RAPGEF1-201ENST00000372189 ZNF574Q6ZN55 896 aaPredicted RBP13.73□□□□□ -0.21
RAPGEF1-201ENST00000372189 CARNMT1Q8N4J0 409 aa13.73□□□□□ -0.21
RAPGEF1-201ENST00000372189 PCYOX1LQ8NBM8 494 aa13.73□□□□□ -0.21
RAPGEF1-201ENST00000372189 IPMKQ8NFU5 416 aa13.73□□□□□ -0.21
RAPGEF1-201ENST00000372189 TMEM176AQ96HP8 235 aa13.73□□□□□ -0.21
RAPGEF1-201ENST00000372189 RUBCNLQ9H714 662 aa13.73□□□□□ -0.21
RAPGEF1-201ENST00000372189 ARHGEF38Q9NXL2 777 aa13.73□□□□□ -0.21
RAPGEF1-201ENST00000372189 DDX43Q9NXZ2 648 aaKnown RBP13.73□□□□□ -0.21
RAPGEF1-201ENST00000372189 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.73□□□□□ -0.21
RAPGEF1-201ENST00000372189 CYP3A4P08684 503 aa13.73□□□□□ -0.21
RAPGEF1-201ENST00000372189 S100A5P33763 92 aa13.73□□□□□ -0.21
RAPGEF1-201ENST00000372189 HEATR4Q86WZ0 1026 aa13.73□□□□□ -0.21
RAPGEF1-201ENST00000372189 PTPRN2Q92932 1015 aa13.73□□□□□ -0.21
RAPGEF1-201ENST00000372189 TSPAN17Q96FV3 270 aa13.73□□□□□ -0.21
RAPGEF1-201ENST00000372189 CDK5RAP1Q96SZ6 601 aaKnown RBP13.73□□□□□ -0.21
RAPGEF1-201ENST00000372189 ADAM33Q9BZ11 813 aa13.73□□□□□ -0.21
RAPGEF1-201ENST00000372189 OLFML3Q9NRN5 406 aa13.73□□□□□ -0.21
RAPGEF1-201ENST00000372189 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.73□□□□□ -0.21
RAPGEF1-201ENST00000372189 L1RE1Q9UN81 338 aa13.73□□□□□ -0.21
RAPGEF1-201ENST00000372189 E7ENQ6 273 aa13.73□□□□□ -0.21
RAPGEF1-201ENST00000372189 MYL2P10916 166 aa13.73□□□□□ -0.21
RAPGEF1-201ENST00000372189 FNTAP49354 379 aa13.73□□□□□ -0.21
RAPGEF1-201ENST00000372189 MYL6P60660 151 aa13.73□□□□□ -0.21
RAPGEF1-201ENST00000372189 UGP2Q16851 508 aa13.73□□□□□ -0.21
RAPGEF1-201ENST00000372189 PRAMEF19Q5SWL8 479 aa13.73□□□□□ -0.21
RAPGEF1-201ENST00000372189 OVOS1Q6IE37 1185 aa13.73□□□□□ -0.21
RAPGEF1-201ENST00000372189 C3orf62Q6ZUJ4 267 aa13.73□□□□□ -0.21
RAPGEF1-201ENST00000372189 E2F7Q96AV8 911 aa13.73□□□□□ -0.21
RAPGEF1-201ENST00000372189 PABPC3Q9H361 631 aaKnown RBP13.73□□□□□ -0.21
RAPGEF1-201ENST00000372189 NDUFA13Q9P0J0 144 aa13.73□□□□□ -0.21
RAPGEF1-201ENST00000372189 UBA1P22314 1058 aaKnown RBP13.73□□□□□ -0.21
RAPGEF1-201ENST00000372189 GEMIN4P57678 1058 aaKnown RBP13.73□□□□□ -0.21
RAPGEF1-201ENST00000372189 ZNF280BQ86YH2 543 aa13.73□□□□□ -0.21
RAPGEF1-201ENST00000372189 GALNT4Q8N4A0 578 aa13.73□□□□□ -0.21
RAPGEF1-201ENST00000372189 TMEM199Q8N511 208 aa13.73□□□□□ -0.21
RAPGEF1-201ENST00000372189 PCDHB5Q9Y5E4 795 aa13.73□□□□□ -0.21
RAPGEF1-201ENST00000372189 ALG6Q9Y672 507 aa13.73□□□□□ -0.21
RAPGEF1-201ENST00000372189 AIM2O14862 343 aa13.72□□□□□ -0.21
RAPGEF1-201ENST00000372189 HNRNPRO43390 633 aaKnown RBP13.72□□□□□ -0.21
RAPGEF1-201ENST00000372189 CKBP12277 381 aa13.72□□□□□ -0.21
RAPGEF1-201ENST00000372189 PTGS2P35354 604 aa13.72□□□□□ -0.21
RAPGEF1-201ENST00000372189 PTK2BQ14289 1009 aa13.72□□□□□ -0.21
RAPGEF1-201ENST00000372189 SCFD1Q8WVM8 642 aa13.72□□□□□ -0.21
RAPGEF1-201ENST00000372189 SPIRE2Q8WWL2 714 aa13.72□□□□□ -0.21
RAPGEF1-201ENST00000372189 SLIT3O75094 1523 aa13.72□□□□□ -0.21
RAPGEF1-201ENST00000372189 CFAP99D6REC4 459 aa13.72□□□□□ -0.21
RAPGEF1-201ENST00000372189 ASS1P00966 412 aaKnown RBP13.72□□□□□ -0.21
RAPGEF1-201ENST00000372189 EFEMP1Q12805 493 aa13.72□□□□□ -0.21
RAPGEF1-201ENST00000372189 FAM171A1Q5VUB5 890 aa13.72□□□□□ -0.21
RAPGEF1-201ENST00000372189 MAGEB18Q96M61 343 aa13.72□□□□□ -0.21
RAPGEF1-201ENST00000372189 C20orf96Q9NUD7 363 aaPredicted RBP13.72□□□□□ -0.21
RAPGEF1-201ENST00000372189 GRID1Q9ULK0 1009 aa13.72□□□□□ -0.21
RAPGEF1-201ENST00000372189 PKP3Q9Y446 797 aa13.72□□□□□ -0.21
RAPGEF1-201ENST00000372189 CDY2AQ9Y6F7 541 aa13.72□□□□□ -0.21
RAPGEF1-201ENST00000372189 CDY1Q9Y6F8 540 aa13.72□□□□□ -0.21
RAPGEF1-201ENST00000372189 NRCAMQ92823 1304 aa13.72□□□□□ -0.21
RAPGEF1-201ENST00000372189 FMN2Q9NZ56 1722 aa13.72□□□□□ -0.21
RAPGEF1-201ENST00000372189 CST8O60676 142 aa13.72□□□□□ -0.21
RAPGEF1-201ENST00000372189 TARSP26639 723 aaKnown RBP13.72□□□□□ -0.21
RAPGEF1-201ENST00000372189 KPNA1P52294 538 aaPredicted RBP13.72□□□□□ -0.21
RAPGEF1-201ENST00000372189 MEI1Q5TIA1 1274 aa13.72□□□□□ -0.21
RAPGEF1-201ENST00000372189 C4orf22Q6V702 233 aa13.72□□□□□ -0.21
RAPGEF1-201ENST00000372189 PATL1Q86TB9 770 aaKnown RBP13.72□□□□□ -0.21
RAPGEF1-201ENST00000372189 CCDC103Q8IW40 242 aa13.72□□□□□ -0.21
RAPGEF1-201ENST00000372189 CLEC4FQ8N1N0 589 aa13.72□□□□□ -0.21
RAPGEF1-201ENST00000372189 TPCN2Q8NHX9 752 aa13.72□□□□□ -0.21
RAPGEF1-201ENST00000372189 ELMO2Q96JJ3 720 aa13.72□□□□□ -0.21
RAPGEF1-201ENST00000372189 TLR8Q9NR97 1041 aaKnown RBP13.72□□□□□ -0.21
RAPGEF1-201ENST00000372189 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.72□□□□□ -0.21
RAPGEF1-201ENST00000372189 IFT172Q9UG01 1749 aa13.72□□□□□ -0.21
RAPGEF1-201ENST00000372189 TAF4O00268 1085 aa13.72□□□□□ -0.21
RAPGEF1-201ENST00000372189 O00370 1275 aa13.72□□□□□ -0.21
RAPGEF1-201ENST00000372189 DDX5P17844 614 aaKnown RBP13.72□□□□□ -0.21
RAPGEF1-201ENST00000372189 BCAP31P51572 246 aa13.72□□□□□ -0.21
RAPGEF1-201ENST00000372189 USF2Q15853 346 aaPredicted RBP13.72□□□□□ -0.21
RAPGEF1-201ENST00000372189 PAPD7Q5XG87 772 aaKnown RBP13.72□□□□□ -0.21
RAPGEF1-201ENST00000372189 TFB1MQ8WVM0 346 aaKnown RBP13.72□□□□□ -0.21
RAPGEF1-201ENST00000372189 MLPHQ9BV36 600 aaPredicted RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms