RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 IFT81Q8WYA0 676 aa27.39■■□□□ 1.97
ATPAF1-202ENST00000371937 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP27.39■■□□□ 1.97
ATPAF1-202ENST00000371937 PCDH18Q9HCL0 1135 aa27.39■■□□□ 1.97
ATPAF1-202ENST00000371937 ABCC13Q9NSE7 274 aa27.39■■□□□ 1.97
ATPAF1-202ENST00000371937 AP4E1Q9UPM8 1137 aa27.39■■□□□ 1.97
ATPAF1-202ENST00000371937 GJB5O95377 273 aa27.38■■□□□ 1.97
ATPAF1-202ENST00000371937 KCNJ1P48048 391 aa27.38■■□□□ 1.97
ATPAF1-202ENST00000371937 AIF1P55008 147 aa27.38■■□□□ 1.97
ATPAF1-202ENST00000371937 YWHAGP61981 247 aaKnown RBP eCLIP27.38■■□□□ 1.97
ATPAF1-202ENST00000371937 PITX1P78337 314 aaPredicted RBP27.38■■□□□ 1.97
ATPAF1-202ENST00000371937 LMNB2Q03252 620 aa27.38■■□□□ 1.97
ATPAF1-202ENST00000371937 IFRD2Q12894 506 aaPredicted RBP27.38■■□□□ 1.97
ATPAF1-202ENST00000371937 NME3Q13232 169 aa27.38■■□□□ 1.97
ATPAF1-202ENST00000371937 DDX53Q86TM3 631 aaKnown RBP27.38■■□□□ 1.97
ATPAF1-202ENST00000371937 FAM131BQ86XD5 332 aa27.38■■□□□ 1.97
ATPAF1-202ENST00000371937 EDEM1Q92611 657 aa27.38■■□□□ 1.97
ATPAF1-202ENST00000371937 ZNF670Q9BS34 389 aa27.38■■□□□ 1.97
ATPAF1-202ENST00000371937 HERC2P3Q9BVR0 1158 aa27.38■■□□□ 1.97
ATPAF1-202ENST00000371937 GPATCH2LQ9NWQ4 482 aa27.38■■□□□ 1.97
ATPAF1-202ENST00000371937 STK39Q9UEW8 545 aa27.38■■□□□ 1.97
ATPAF1-202ENST00000371937 SCML2Q9UQR0 700 aa27.38■■□□□ 1.97
ATPAF1-202ENST00000371937 GAS8O95995 478 aa27.37■■□□□ 1.97
ATPAF1-202ENST00000371937 HAPLN1P10915 354 aaPredicted RBP27.37■■□□□ 1.97
ATPAF1-202ENST00000371937 GLUD2P49448 558 aa27.37■■□□□ 1.97
ATPAF1-202ENST00000371937 RPL10AP62906 217 aaKnown RBP27.37■■□□□ 1.97
ATPAF1-202ENST00000371937 DSG1Q02413 1049 aa27.37■■□□□ 1.97
ATPAF1-202ENST00000371937 MGAT5BQ3V5L5 792 aa27.37■■□□□ 1.97
ATPAF1-202ENST00000371937 C7orf61Q8IZ16 206 aa27.37■■□□□ 1.97
ATPAF1-202ENST00000371937 CCDC185Q8N715 623 aa27.37■■□□□ 1.97
ATPAF1-202ENST00000371937 SPATA17Q96L03 361 aa27.37■■□□□ 1.97
ATPAF1-202ENST00000371937 TRIM51Q9BSJ1 452 aa27.37■■□□□ 1.97
ATPAF1-202ENST00000371937 DHX35Q9H5Z1 703 aaKnown RBP27.37■■□□□ 1.97
ATPAF1-202ENST00000371937 FAM114A2Q9NRY5 505 aa27.37■■□□□ 1.97
ATPAF1-202ENST00000371937 PCDH10Q9P2E7 1040 aa27.37■■□□□ 1.97
ATPAF1-202ENST00000371937 PCDHB12Q9Y5F1 795 aa27.37■■□□□ 1.97
ATPAF1-202ENST00000371937 SYNJ2BP-COX16A0A087WUM0 186 aa27.37■■□□□ 1.97
ATPAF1-202ENST00000371937 LIASO43766 372 aa27.37■■□□□ 1.97
ATPAF1-202ENST00000371937 MYBL2P10244 700 aa27.37■■□□□ 1.97
ATPAF1-202ENST00000371937 OR1D2P34982 312 aa27.37■■□□□ 1.97
ATPAF1-202ENST00000371937 CARSP49589 748 aaKnown RBP27.37■■□□□ 1.97
ATPAF1-202ENST00000371937 HTRA4P83105 476 aaPredicted RBP27.37■■□□□ 1.97
ATPAF1-202ENST00000371937 ROR1Q01973 937 aa27.37■■□□□ 1.97
ATPAF1-202ENST00000371937 BTBD8Q5XKL5 378 aa27.37■■□□□ 1.97
ATPAF1-202ENST00000371937 SND1Q7KZF4 910 aaKnown RBP eCLIP27.37■■□□□ 1.97
ATPAF1-202ENST00000371937 MON1AQ86VX9 555 aa27.37■■□□□ 1.97
ATPAF1-202ENST00000371937 ARHGAP18Q8N392 663 aa27.37■■□□□ 1.97
ATPAF1-202ENST00000371937 RNF157Q96PX1 679 aa27.37■■□□□ 1.97
ATPAF1-202ENST00000371937 PIGVQ9NUD9 493 aa27.37■■□□□ 1.97
ATPAF1-202ENST00000371937 DDIT4Q9NX09 232 aa27.37■■□□□ 1.97
ATPAF1-202ENST00000371937 IL37Q9NZH6 218 aa27.37■■□□□ 1.97
ATPAF1-202ENST00000371937 COX16Q9P0S2 106 aa27.37■■□□□ 1.97
ATPAF1-202ENST00000371937 FZD10Q9ULW2 581 aa27.37■■□□□ 1.97
ATPAF1-202ENST00000371937 SLC27A5Q9Y2P5 690 aa27.37■■□□□ 1.97
ATPAF1-202ENST00000371937 SEC31AO94979 1220 aaKnown RBP27.36■■□□□ 1.97
ATPAF1-202ENST00000371937 RTN3O95197 1032 aaPredicted RBP27.36■■□□□ 1.97
ATPAF1-202ENST00000371937 L1CAMP32004 1257 aa27.36■■□□□ 1.97
ATPAF1-202ENST00000371937 GPR15P49685 360 aa27.36■■□□□ 1.97
ATPAF1-202ENST00000371937 EPHB4P54760 987 aa27.36■■□□□ 1.97
ATPAF1-202ENST00000371937 DRG2P55039 364 aaKnown RBP27.36■■□□□ 1.97
ATPAF1-202ENST00000371937 BYSLQ13895 437 aaKnown RBP27.36■■□□□ 1.97
ATPAF1-202ENST00000371937 PPP1R7Q15435 360 aa27.36■■□□□ 1.97
ATPAF1-202ENST00000371937 CA9Q16790 459 aa27.36■■□□□ 1.97
ATPAF1-202ENST00000371937 TMEM240Q5SV17 173 aa27.36■■□□□ 1.97
ATPAF1-202ENST00000371937 DUPD1Q68J44 220 aa27.36■■□□□ 1.97
ATPAF1-202ENST00000371937 DENND5BQ6ZUT9 1274 aa27.36■■□□□ 1.97
ATPAF1-202ENST00000371937 TTC9BQ8N6N2 239 aa27.36■■□□□ 1.97
ATPAF1-202ENST00000371937 TRAF3IP1Q8TDR0 691 aaPredicted RBP27.36■■□□□ 1.97
ATPAF1-202ENST00000371937 SEPT5Q99719 369 aaPredicted RBP27.36■■□□□ 1.97
ATPAF1-202ENST00000371937 ZBED2Q9BTP6 218 aa27.36■■□□□ 1.97
ATPAF1-202ENST00000371937 FAM204AQ9H8W3 233 aa27.36■■□□□ 1.97
ATPAF1-202ENST00000371937 ZNF446Q9NWS9 450 aa27.36■■□□□ 1.97
ATPAF1-202ENST00000371937 COMMD8Q9NX08 183 aa27.36■■□□□ 1.97
ATPAF1-202ENST00000371937 INSL6Q9Y581 213 aa27.36■■□□□ 1.97
ATPAF1-202ENST00000371937 ALPK3Q96L96 1907 aa27.36■■□□□ 1.97
ATPAF1-202ENST00000371937 WDR27A2RRH5 827 aa27.35■■□□□ 1.97
ATPAF1-202ENST00000371937 APOC4-APOC2K7ER74 178 aa27.35■■□□□ 1.97
ATPAF1-202ENST00000371937 C2CD2LO14523 706 aa27.35■■□□□ 1.97
ATPAF1-202ENST00000371937 VNN2O95498 520 aa27.35■■□□□ 1.97
ATPAF1-202ENST00000371937 APOC2P02655 101 aa27.35■■□□□ 1.97
ATPAF1-202ENST00000371937 DYNLT1P63172 113 aa27.35■■□□□ 1.97
ATPAF1-202ENST00000371937 DUSP4Q13115 394 aa27.35■■□□□ 1.97
ATPAF1-202ENST00000371937 MMRN1Q13201 1228 aa27.35■■□□□ 1.97
ATPAF1-202ENST00000371937 PPP6R3Q5H9R7 873 aaPredicted RBP27.35■■□□□ 1.97
ATPAF1-202ENST00000371937 SDHAF4Q5VUM1 108 aa27.35■■□□□ 1.97
ATPAF1-202ENST00000371937 FIBCD1Q8N539 461 aa27.35■■□□□ 1.97
ATPAF1-202ENST00000371937 CCDC114Q96M63 670 aa27.35■■□□□ 1.97
ATPAF1-202ENST00000371937 CEP295NLQ96MC4 621 aa27.35■■□□□ 1.97
ATPAF1-202ENST00000371937 NFU1Q9UMS0 254 aa27.35■■□□□ 1.97
ATPAF1-202ENST00000371937 COL4A4P53420 1690 aaPredicted RBP27.34■■□□□ 1.97
ATPAF1-202ENST00000371937 ATP8B1O43520 1251 aa27.34■■□□□ 1.97
ATPAF1-202ENST00000371937 IL4RP24394 825 aa27.34■■□□□ 1.97
ATPAF1-202ENST00000371937 GBP1P32455 592 aa27.34■■□□□ 1.97
ATPAF1-202ENST00000371937 ANKRD20A8PQ5CZ79 823 aa27.34■■□□□ 1.97
ATPAF1-202ENST00000371937 EMBQ6PCB8 327 aa27.34■■□□□ 1.97
ATPAF1-202ENST00000371937 AENQ8WTP8 325 aaKnown RBP27.34■■□□□ 1.97
ATPAF1-202ENST00000371937 NTAN1Q96AB6 310 aa27.34■■□□□ 1.97
ATPAF1-202ENST00000371937 FAF2Q96CS3 445 aa27.34■■□□□ 1.97
ATPAF1-202ENST00000371937 TMEM51Q9NW97 253 aa27.34■■□□□ 1.97
ATPAF1-202ENST00000371937 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP27.34■■□□□ 1.97
ATPAF1-202ENST00000371937 DRG1Q9Y295 367 aaKnown RBP27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms