RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 ST13P50502 369 aaKnown RBP12.15□□□□□ -0.46
PTPN1-201ENST00000371621 ROR1Q01973 937 aa12.15□□□□□ -0.46
PTPN1-201ENST00000371621 TMC7Q7Z402 723 aa12.15□□□□□ -0.46
PTPN1-201ENST00000371621 AKAP14Q86UN6 197 aa12.15□□□□□ -0.46
PTPN1-201ENST00000371621 SLC26A11Q86WA9 606 aa12.15□□□□□ -0.46
PTPN1-201ENST00000371621 FBXO11Q86XK2 927 aa12.15□□□□□ -0.46
PTPN1-201ENST00000371621 PDSS2Q86YH6 399 aa12.15□□□□□ -0.46
PTPN1-201ENST00000371621 ZCCHC9Q8N567 271 aaKnown RBP12.15□□□□□ -0.46
PTPN1-201ENST00000371621 ADAM32Q8TC27 787 aa12.15□□□□□ -0.46
PTPN1-201ENST00000371621 MAGEE2Q8TD90 523 aaPredicted RBP12.15□□□□□ -0.46
PTPN1-201ENST00000371621 TMIGD2Q96BF3 282 aa12.15□□□□□ -0.46
PTPN1-201ENST00000371621 DMRTB1Q96MA1 342 aa12.15□□□□□ -0.46
PTPN1-201ENST00000371621 FAM213AQ9BRX8 229 aa12.15□□□□□ -0.46
PTPN1-201ENST00000371621 RAD21L1Q9H4I0 556 aa12.15□□□□□ -0.46
PTPN1-201ENST00000371621 TCF7L2Q9NQB0 619 aa12.15□□□□□ -0.46
PTPN1-201ENST00000371621 SYBUQ9NX95 663 aa12.15□□□□□ -0.46
PTPN1-201ENST00000371621 FUOMA2VDF0 154 aa12.15□□□□□ -0.47
PTPN1-201ENST00000371621 GSTA4O15217 222 aa12.15□□□□□ -0.47
PTPN1-201ENST00000371621 CCNKO75909 580 aa12.15□□□□□ -0.47
PTPN1-201ENST00000371621 BAIAP3O94812 1187 aa12.15□□□□□ -0.47
PTPN1-201ENST00000371621 ZNF12P17014 697 aa12.15□□□□□ -0.47
PTPN1-201ENST00000371621 DEFA1P59665 94 aa12.15□□□□□ -0.47
PTPN1-201ENST00000371621 DEFA3P59666 94 aa12.15□□□□□ -0.47
PTPN1-201ENST00000371621 EVX2Q03828 476 aa12.15□□□□□ -0.47
PTPN1-201ENST00000371621 PTK6Q13882 451 aa12.15□□□□□ -0.47
PTPN1-201ENST00000371621 CYP2A13Q16696 494 aa12.15□□□□□ -0.47
PTPN1-201ENST00000371621 FUT11Q495W5 492 aa12.15□□□□□ -0.47
PTPN1-201ENST00000371621 N4BP2L1Q5TBK1 243 aaPredicted RBP12.15□□□□□ -0.47
PTPN1-201ENST00000371621 KRT39Q6A163 491 aa12.15□□□□□ -0.47
PTPN1-201ENST00000371621 TBATAQ96M53 351 aa12.15□□□□□ -0.47
PTPN1-201ENST00000371621 THAP1Q9NVV9 213 aa12.15□□□□□ -0.47
PTPN1-201ENST00000371621 IPPQ9Y573 584 aa12.15□□□□□ -0.47
PTPN1-201ENST00000371621 CDY2AQ9Y6F7 541 aa12.15□□□□□ -0.47
PTPN1-201ENST00000371621 CDY1Q9Y6F8 540 aa12.15□□□□□ -0.47
PTPN1-201ENST00000371621 MST1RQ04912 1400 aa12.14□□□□□ -0.47
PTPN1-201ENST00000371621 SH3PXD2BA1X283 911 aa12.14□□□□□ -0.47
PTPN1-201ENST00000371621 GOLGA8CPA6NN73 597 aa12.14□□□□□ -0.47
PTPN1-201ENST00000371621 MED24O75448 989 aa12.14□□□□□ -0.47
PTPN1-201ENST00000371621 IFI30P13284 250 aa12.14□□□□□ -0.47
PTPN1-201ENST00000371621 GRK2P25098 689 aa12.14□□□□□ -0.47
PTPN1-201ENST00000371621 PSMB9P28065 219 aa12.14□□□□□ -0.47
PTPN1-201ENST00000371621 ALDH4A1P30038 563 aa12.14□□□□□ -0.47
PTPN1-201ENST00000371621 SLC15A2Q16348 729 aa12.14□□□□□ -0.47
PTPN1-201ENST00000371621 ELMSAN1Q6PJG2 1045 aa12.14□□□□□ -0.47
PTPN1-201ENST00000371621 GAB3Q8WWW8 586 aa12.14□□□□□ -0.47
PTPN1-201ENST00000371621 VTI1AQ96AJ9 217 aa12.14□□□□□ -0.47
PTPN1-201ENST00000371621 NACC1Q96RE7 527 aa12.14□□□□□ -0.47
PTPN1-201ENST00000371621 OXCT2Q9BYC2 517 aaPredicted RBP12.14□□□□□ -0.47
PTPN1-201ENST00000371621 RPRD1BQ9NQG5 326 aaKnown RBP12.14□□□□□ -0.47
PTPN1-201ENST00000371621 FAIMQ9NVQ4 179 aa12.14□□□□□ -0.47
PTPN1-201ENST00000371621 C16orf96A6NNT2 1141 aa12.14□□□□□ -0.47
PTPN1-201ENST00000371621 TFECO14948 347 aaPredicted RBP12.14□□□□□ -0.47
PTPN1-201ENST00000371621 TNFRSF21O75509 655 aa12.14□□□□□ -0.47
PTPN1-201ENST00000371621 CYP1A1P04798 512 aaPredicted RBP12.14□□□□□ -0.47
PTPN1-201ENST00000371621 GSNP06396 782 aa12.14□□□□□ -0.47
PTPN1-201ENST00000371621 MAP3K10Q02779 954 aa12.14□□□□□ -0.47
PTPN1-201ENST00000371621 INPP5AQ14642 412 aa12.14□□□□□ -0.47
PTPN1-201ENST00000371621 NKX1-1Q15270 411 aaPredicted RBP12.14□□□□□ -0.47
PTPN1-201ENST00000371621 TLR1Q15399 786 aa12.14□□□□□ -0.47
PTPN1-201ENST00000371621 MFSD7Q6UXD7 560 aa12.14□□□□□ -0.47
PTPN1-201ENST00000371621 HACE1Q8IYU2 909 aa12.14□□□□□ -0.47
PTPN1-201ENST00000371621 RERGLQ9H628 205 aa12.14□□□□□ -0.47
PTPN1-201ENST00000371621 EXOSC4Q9NPD3 245 aaKnown RBP12.14□□□□□ -0.47
PTPN1-201ENST00000371621 FAM149AA5PLN7 773 aa12.14□□□□□ -0.47
PTPN1-201ENST00000371621 RAD17O75943 681 aa12.14□□□□□ -0.47
PTPN1-201ENST00000371621 CYP11B1P15538 503 aa12.14□□□□□ -0.47
PTPN1-201ENST00000371621 ZNF182P17025 639 aaPredicted RBP12.14□□□□□ -0.47
PTPN1-201ENST00000371621 ATF4P18848 351 aaPredicted RBP12.14□□□□□ -0.47
PTPN1-201ENST00000371621 HOXD11P31277 338 aaPredicted RBP12.14□□□□□ -0.47
PTPN1-201ENST00000371621 PRKCIP41743 596 aa12.14□□□□□ -0.47
PTPN1-201ENST00000371621 CD97P48960 835 aa12.14□□□□□ -0.47
PTPN1-201ENST00000371621 BCAR1P56945 870 aa12.14□□□□□ -0.47
PTPN1-201ENST00000371621 NDUFA5Q16718 116 aa12.14□□□□□ -0.47
PTPN1-201ENST00000371621 COBLL1Q53SF7 1204 aa12.14□□□□□ -0.47
PTPN1-201ENST00000371621 CHST15Q7LFX5 561 aaPredicted RBP12.14□□□□□ -0.47
PTPN1-201ENST00000371621 RCOR2Q8IZ40 523 aa12.14□□□□□ -0.47
PTPN1-201ENST00000371621 FBXL13Q8NEE6 735 aa12.14□□□□□ -0.47
PTPN1-201ENST00000371621 ST13P5Q8NFI4 369 aaPredicted RBP12.14□□□□□ -0.47
PTPN1-201ENST00000371621 UBASH3BQ8TF42 649 aa12.14□□□□□ -0.47
PTPN1-201ENST00000371621 SLC4A5Q9BY07 1137 aa12.14□□□□□ -0.47
PTPN1-201ENST00000371621 XPNPEP1Q9NQW7 623 aa12.14□□□□□ -0.47
PTPN1-201ENST00000371621 PNPOQ9NVS9 261 aa12.14□□□□□ -0.47
PTPN1-201ENST00000371621 IP6K2Q9UHH9 426 aa12.14□□□□□ -0.47
PTPN1-201ENST00000371621 ADAMTS6Q9UKP5 1117 aa12.14□□□□□ -0.47
PTPN1-201ENST00000371621 ATP9BO43861 1147 aa12.13□□□□□ -0.47
PTPN1-201ENST00000371621 PRPSAP2O60256 369 aa12.13□□□□□ -0.47
PTPN1-201ENST00000371621 UFL1O94874 794 aa12.13□□□□□ -0.47
PTPN1-201ENST00000371621 CKMT2P17540 419 aa12.13□□□□□ -0.47
PTPN1-201ENST00000371621 CHRNB2P17787 502 aa12.13□□□□□ -0.47
PTPN1-201ENST00000371621 ABCG1P45844 678 aa12.13□□□□□ -0.47
PTPN1-201ENST00000371621 YAP1P46937 504 aaKnown RBP12.13□□□□□ -0.47
PTPN1-201ENST00000371621 GSSP48637 474 aa12.13□□□□□ -0.47
PTPN1-201ENST00000371621 AKR1D1P51857 326 aa12.13□□□□□ -0.47
PTPN1-201ENST00000371621 SNX16P57768 344 aa12.13□□□□□ -0.47
PTPN1-201ENST00000371621 OSTNP61366 133 aa12.13□□□□□ -0.47
PTPN1-201ENST00000371621 ANKDD1AQ495B1 522 aa12.13□□□□□ -0.47
PTPN1-201ENST00000371621 ASPRV1Q53RT3 343 aa12.13□□□□□ -0.47
PTPN1-201ENST00000371621 NEK5Q6P3R8 708 aa12.13□□□□□ -0.47
PTPN1-201ENST00000371621 NCLNQ969V3 563 aa12.13□□□□□ -0.47
PTPN1-201ENST00000371621 FAM136AQ96C01 138 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms