RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 NUP93Q8N1F7 819 aa15.19■□□□□ 0.02
NDC1-201ENST00000371429 TMEM161BQ8NDZ6 487 aa15.19■□□□□ 0.02
NDC1-201ENST00000371429 FAM136AQ96C01 138 aa15.19■□□□□ 0.02
NDC1-201ENST00000371429 MRPL1Q9BYD6 325 aaKnown RBP15.19■□□□□ 0.02
NDC1-201ENST00000371429 TBC1D13Q9NVG8 400 aa15.19■□□□□ 0.02
NDC1-201ENST00000371429 FAF1Q9UNN5 650 aaPredicted RBP15.19■□□□□ 0.02
NDC1-201ENST00000371429 ATP5C1P36542 298 aaKnown RBP15.19■□□□□ 0.02
NDC1-201ENST00000371429 PLA2G4AP47712 749 aa15.19■□□□□ 0.02
NDC1-201ENST00000371429 ITGA7Q13683 1181 aa15.19■□□□□ 0.02
NDC1-201ENST00000371429 MYO1HQ8N1T3 1032 aa15.19■□□□□ 0.02
NDC1-201ENST00000371429 COLGALT1Q8NBJ5 622 aa15.19■□□□□ 0.02
NDC1-201ENST00000371429 LPPQ93052 612 aa15.19■□□□□ 0.02
NDC1-201ENST00000371429 VIPAS39Q9H9C1 493 aa15.19■□□□□ 0.02
NDC1-201ENST00000371429 LNPEPQ9UIQ6 1025 aa15.19■□□□□ 0.02
NDC1-201ENST00000371429 FAM32AQ9Y421 112 aaKnown RBP15.19■□□□□ 0.02
NDC1-201ENST00000371429 TMEM120BA0PK00 339 aa15.18■□□□□ 0.02
NDC1-201ENST00000371429 RBAK-RBAKDNI3L0D1 243 aa15.18■□□□□ 0.02
NDC1-201ENST00000371429 ATP6V1E1P36543 226 aa15.18■□□□□ 0.02
NDC1-201ENST00000371429 PTENP60484 403 aa15.18■□□□□ 0.02
NDC1-201ENST00000371429 DSG4Q86SJ6 1040 aa15.18■□□□□ 0.02
NDC1-201ENST00000371429 DNAAF5Q86Y56 855 aa15.18■□□□□ 0.02
NDC1-201ENST00000371429 FAM167BQ9BTA0 163 aa15.18■□□□□ 0.02
NDC1-201ENST00000371429 NFKBIZQ9BYH8 718 aa15.18■□□□□ 0.02
NDC1-201ENST00000371429 IARS2Q9NSE4 1012 aaKnown RBP15.18■□□□□ 0.02
NDC1-201ENST00000371429 SCOCQ9UIL1 159 aa15.18■□□□□ 0.02
NDC1-201ENST00000371429 RNF112Q9ULX5 631 aa15.18■□□□□ 0.02
NDC1-201ENST00000371429 ARL2BPQ9Y2Y0 163 aa15.18■□□□□ 0.02
NDC1-201ENST00000371429 CDY1Q9Y6F8 540 aa15.18■□□□□ 0.02
NDC1-201ENST00000371429 E5RJQ4 531 aa15.18■□□□□ 0.02
NDC1-201ENST00000371429 SUPT7LO94864 414 aa15.18■□□□□ 0.02
NDC1-201ENST00000371429 APOA4P06727 396 aa15.18■□□□□ 0.02
NDC1-201ENST00000371429 NFICP08651 508 aa15.18■□□□□ 0.02
NDC1-201ENST00000371429 SARSP49591 514 aaKnown RBP15.18■□□□□ 0.02
NDC1-201ENST00000371429 CCNG2Q16589 344 aa15.18■□□□□ 0.02
NDC1-201ENST00000371429 LVRNQ6Q4G3 990 aa15.18■□□□□ 0.02
NDC1-201ENST00000371429 IFNEQ86WN2 208 aa15.18■□□□□ 0.02
NDC1-201ENST00000371429 CD99L2Q8TCZ2 262 aa15.18■□□□□ 0.02
NDC1-201ENST00000371429 HIPK3Q9H422 1215 aa15.18■□□□□ 0.02
NDC1-201ENST00000371429 YY1AP1Q9H869 796 aa15.18■□□□□ 0.02
NDC1-201ENST00000371429 CDYLQ9Y232 598 aa15.18■□□□□ 0.02
NDC1-201ENST00000371429 GLP2RO95838 553 aa15.18■□□□□ 0.02
NDC1-201ENST00000371429 ENO1P06733 434 aaKnown RBP15.18■□□□□ 0.02
NDC1-201ENST00000371429 MDH1P40925 334 aaKnown RBP15.18■□□□□ 0.02
NDC1-201ENST00000371429 EIF2B5Q13144 721 aaKnown RBP15.18■□□□□ 0.02
NDC1-201ENST00000371429 CBWD6Q4V339 395 aa15.18■□□□□ 0.02
NDC1-201ENST00000371429 CBWD3Q5JTY5 395 aa15.18■□□□□ 0.02
NDC1-201ENST00000371429 CBWD5Q5RIA9 395 aa15.18■□□□□ 0.02
NDC1-201ENST00000371429 ILDR1Q86SU0 546 aaPredicted RBP15.18■□□□□ 0.02
NDC1-201ENST00000371429 ARMC2Q8NEN0 867 aa15.18■□□□□ 0.02
NDC1-201ENST00000371429 PPTC7Q8NI37 304 aa15.18■□□□□ 0.02
NDC1-201ENST00000371429 E2F7Q96AV8 911 aa15.18■□□□□ 0.02
NDC1-201ENST00000371429 RNPEPQ9H4A4 650 aa15.18■□□□□ 0.02
NDC1-201ENST00000371429 PCYOX1LQ8NBM8 494 aa15.18■□□□□ 0.02
NDC1-201ENST00000371429 NAF1Q96HR8 494 aaKnown RBP15.18■□□□□ 0.02
NDC1-201ENST00000371429 ABCC13Q9NSE7 274 aa15.18■□□□□ 0.02
NDC1-201ENST00000371429 MRGBPQ9NV56 204 aa15.18■□□□□ 0.02
NDC1-201ENST00000371429 STOML1Q9UBI4 398 aa15.18■□□□□ 0.02
NDC1-201ENST00000371429 AURKCQ9UQB9 309 aa15.18■□□□□ 0.02
NDC1-201ENST00000371429 MED1Q15648 1581 aaPredicted RBP15.18■□□□□ 0.02
NDC1-201ENST00000371429 SYCE1LA8MT33 242 aa15.17■□□□□ 0.02
NDC1-201ENST00000371429 ANKRD65E5RJM6 399 aa15.17■□□□□ 0.02
NDC1-201ENST00000371429 PRKCQQ04759 706 aa15.17■□□□□ 0.02
NDC1-201ENST00000371429 NT5DC3Q86UY8 548 aa15.17■□□□□ 0.02
NDC1-201ENST00000371429 CACUL1Q86Y37 369 aa15.17■□□□□ 0.02
NDC1-201ENST00000371429 STX18Q9P2W9 335 aaKnown RBP15.17■□□□□ 0.02
NDC1-201ENST00000371429 TEKT2Q9UIF3 430 aa15.17■□□□□ 0.02
NDC1-201ENST00000371429 MRPS23Q9Y3D9 190 aaKnown RBP15.17■□□□□ 0.02
NDC1-201ENST00000371429 ATP5BP06576 529 aaKnown RBP15.17■□□□□ 0.02
NDC1-201ENST00000371429 ADH1AP07327 375 aa15.17■□□□□ 0.02
NDC1-201ENST00000371429 ENO3P13929 434 aaPredicted RBP15.17■□□□□ 0.02
NDC1-201ENST00000371429 YBX3P16989 372 aaKnown RBP eCLIP15.17■□□□□ 0.028e-7■■■□□ 14.7
NDC1-201ENST00000371429 PPM1AP35813 382 aa15.17■□□□□ 0.02
NDC1-201ENST00000371429 PLCL1Q15111 1095 aa15.17■□□□□ 0.02
NDC1-201ENST00000371429 USP41Q3LFD5 358 aa15.17■□□□□ 0.02
NDC1-201ENST00000371429 C11orf63Q6NUN7 778 aa15.17■□□□□ 0.02
NDC1-201ENST00000371429 REXO1L1PQ8IX06 675 aa15.17■□□□□ 0.02
NDC1-201ENST00000371429 CXorf38Q8TB03 319 aa15.17■□□□□ 0.02
NDC1-201ENST00000371429 IL17RAQ96F46 866 aa15.17■□□□□ 0.02
NDC1-201ENST00000371429 ACO2Q99798 780 aaKnown RBP15.17■□□□□ 0.02
NDC1-201ENST00000371429 MFSD1Q9H3U5 465 aa15.17■□□□□ 0.02
NDC1-201ENST00000371429 NMRK1Q9NWW6 199 aa15.17■□□□□ 0.02
NDC1-201ENST00000371429 TBC1D3BA6NDS4 549 aa15.17■□□□□ 0.02
NDC1-201ENST00000371429 KPNA3O00505 521 aaPredicted RBP15.17■□□□□ 0.02
NDC1-201ENST00000371429 TLL1O43897 1013 aa15.17■□□□□ 0.02
NDC1-201ENST00000371429 ALOX15P16050 662 aaPredicted RBP15.17■□□□□ 0.02
NDC1-201ENST00000371429 AMPD1P23109 780 aa15.17■□□□□ 0.02
NDC1-201ENST00000371429 HIC1Q14526 733 aa15.17■□□□□ 0.02
NDC1-201ENST00000371429 AGBL2Q5U5Z8 902 aa15.17■□□□□ 0.02
NDC1-201ENST00000371429 TPGS1Q6ZTW0 290 aa15.17■□□□□ 0.02
NDC1-201ENST00000371429 ASAH2Q9NR71 780 aa15.17■□□□□ 0.02
NDC1-201ENST00000371429 SLC9A3R1O14745 358 aaPredicted RBP15.17■□□□□ 0.02
NDC1-201ENST00000371429 AP2B1P63010 937 aa15.17■□□□□ 0.02
NDC1-201ENST00000371429 CREMQ03060 361 aa15.17■□□□□ 0.02
NDC1-201ENST00000371429 PPP3CAQ08209 521 aa15.17■□□□□ 0.02
NDC1-201ENST00000371429 SHROOM1Q2M3G4 852 aaPredicted RBP15.17■□□□□ 0.02
NDC1-201ENST00000371429 NT5DC1Q5TFE4 455 aa15.17■□□□□ 0.02
NDC1-201ENST00000371429 INPP4AQ96PE3 977 aaPredicted RBP15.17■□□□□ 0.02
NDC1-201ENST00000371429 TKTL2Q9H0I9 626 aa15.17■□□□□ 0.02
NDC1-201ENST00000371429 NEUROG2Q9H2A3 272 aa15.17■□□□□ 0.02
NDC1-201ENST00000371429 IGSF6O95976 241 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms