RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 LUC7L2Q9Y383 392 aaKnown RBP15.52■□□□□ 0.08
COL9A1-204ENST00000370496 SLC9A3R1O14745 358 aaPredicted RBP15.51■□□□□ 0.07
COL9A1-204ENST00000370496 HSF2BPO75031 334 aa15.51■□□□□ 0.07
COL9A1-204ENST00000370496 HMBSP08397 361 aa15.51■□□□□ 0.07
COL9A1-204ENST00000370496 CASP14P31944 242 aa15.51■□□□□ 0.07
COL9A1-204ENST00000370496 KPNA1P52294 538 aaPredicted RBP15.51■□□□□ 0.07
COL9A1-204ENST00000370496 TNK2Q07912 1038 aa15.51■□□□□ 0.07
COL9A1-204ENST00000370496 KLHL30Q0D2K2 578 aa15.51■□□□□ 0.07
COL9A1-204ENST00000370496 MLF2Q15773 248 aaPredicted RBP15.51■□□□□ 0.07
COL9A1-204ENST00000370496 FAM102AQ5T9C2 384 aaPredicted RBP15.51■□□□□ 0.07
COL9A1-204ENST00000370496 OLFML1Q6UWY5 402 aa15.51■□□□□ 0.07
COL9A1-204ENST00000370496 TPRG1Q6ZUI0 275 aa15.51■□□□□ 0.07
COL9A1-204ENST00000370496 CPA6Q8N4T0 437 aa15.51■□□□□ 0.07
COL9A1-204ENST00000370496 C18orf8Q96DM3 657 aa15.51■□□□□ 0.07
COL9A1-204ENST00000370496 PIWIL1Q96J94 861 aaKnown RBP15.51■□□□□ 0.07
COL9A1-204ENST00000370496 C11orf70Q9BRQ4 267 aa15.51■□□□□ 0.07
COL9A1-204ENST00000370496 C1QTNF1Q9BXJ1 281 aa15.51■□□□□ 0.07
COL9A1-204ENST00000370496 KLF16Q9BXK1 252 aaPredicted RBP15.51■□□□□ 0.07
COL9A1-204ENST00000370496 EBF3Q9H4W6 596 aa15.51■□□□□ 0.07
COL9A1-204ENST00000370496 POPDC2Q9HBU9 364 aa15.51■□□□□ 0.07
COL9A1-204ENST00000370496 TRPV5Q9NQA5 729 aa15.51■□□□□ 0.07
COL9A1-204ENST00000370496 HEBP1Q9NRV9 189 aa15.51■□□□□ 0.07
COL9A1-204ENST00000370496 GKN1Q9NS71 199 aa15.51■□□□□ 0.07
COL9A1-204ENST00000370496 AIPL1Q9NZN9 384 aa15.51■□□□□ 0.07
COL9A1-204ENST00000370496 CAPN11Q9UMQ6 739 aa15.51■□□□□ 0.07
COL9A1-204ENST00000370496 TECTAO75443 2155 aa15.51■□□□□ 0.07
COL9A1-204ENST00000370496 SLC12A8A0AV02 714 aa15.5■□□□□ 0.07
COL9A1-204ENST00000370496 E2F8A0AVK6 867 aa15.5■□□□□ 0.07
COL9A1-204ENST00000370496 ARNTLO00327 626 aa15.5■□□□□ 0.07
COL9A1-204ENST00000370496 MSI1O43347 362 aaKnown RBP15.5■□□□□ 0.07
COL9A1-204ENST00000370496 NFATC1O95644 943 aa15.5■□□□□ 0.07
COL9A1-204ENST00000370496 CYP1A1P04798 512 aaPredicted RBP15.5■□□□□ 0.07
COL9A1-204ENST00000370496 ARSAP15289 507 aa15.5■□□□□ 0.07
COL9A1-204ENST00000370496 COG7P83436 770 aa15.5■□□□□ 0.07
COL9A1-204ENST00000370496 CENPCQ03188 943 aa15.5■□□□□ 0.07
COL9A1-204ENST00000370496 CLEC16AQ2KHT3 1053 aa15.5■□□□□ 0.07
COL9A1-204ENST00000370496 ITPRIPL2Q3MIP1 535 aa15.5■□□□□ 0.07
COL9A1-204ENST00000370496 EFHC1Q5JVL4 640 aa15.5■□□□□ 0.07
COL9A1-204ENST00000370496 MSANTD2Q6P1R3 559 aa15.5■□□□□ 0.07
COL9A1-204ENST00000370496 MMS22LQ6ZRQ5 1243 aa15.5■□□□□ 0.07
COL9A1-204ENST00000370496 IRF2BP2Q7Z5L9 587 aa15.5■□□□□ 0.07
COL9A1-204ENST00000370496 SLC30A5Q8TAD4 765 aa15.5■□□□□ 0.07
COL9A1-204ENST00000370496 TTC8Q8TAM2 541 aa15.5■□□□□ 0.07
COL9A1-204ENST00000370496 SHDQ96IW2 340 aa15.5■□□□□ 0.07
COL9A1-204ENST00000370496 HAUS4Q9H6D7 363 aa15.5■□□□□ 0.07
COL9A1-204ENST00000370496 ASNSD1Q9NWL6 643 aa15.5■□□□□ 0.07
COL9A1-204ENST00000370496 GTSE1Q9NYZ3 720 aa15.5■□□□□ 0.07
COL9A1-204ENST00000370496 TBC1D14Q9P2M4 693 aa15.5■□□□□ 0.07
COL9A1-204ENST00000370496 PIAS3Q9Y6X2 628 aa15.5■□□□□ 0.07
COL9A1-204ENST00000370496 TRIOO75962 3097 aa15.5■□□□□ 0.07
COL9A1-204ENST00000370496 KRBA1A5PL33 1030 aa15.49■□□□□ 0.07
COL9A1-204ENST00000370496 GOLGA8SH3BPF8 625 aa15.49■□□□□ 0.07
COL9A1-204ENST00000370496 STK25O00506 426 aa15.49■□□□□ 0.07
COL9A1-204ENST00000370496 DAB1O75553 588 aa15.49■□□□□ 0.07
COL9A1-204ENST00000370496 GRAP2O75791 330 aa15.49■□□□□ 0.07
COL9A1-204ENST00000370496 STC2O76061 302 aa15.49■□□□□ 0.07
COL9A1-204ENST00000370496 GLI1P08151 1106 aa15.49■□□□□ 0.07
COL9A1-204ENST00000370496 TNFAIP3P21580 790 aa15.49■□□□□ 0.07
COL9A1-204ENST00000370496 PRKCIP41743 596 aa15.49■□□□□ 0.07
COL9A1-204ENST00000370496 YWHAZP63104 245 aaKnown RBP15.49■□□□□ 0.07
COL9A1-204ENST00000370496 SLC6A3Q01959 620 aa15.49■□□□□ 0.07
COL9A1-204ENST00000370496 PRKCQQ04759 706 aa15.49■□□□□ 0.07
COL9A1-204ENST00000370496 RUNX3Q13761 415 aa15.49■□□□□ 0.07
COL9A1-204ENST00000370496 EML3Q32P44 896 aa15.49■□□□□ 0.07
COL9A1-204ENST00000370496 SLC44A4Q53GD3 710 aa15.49■□□□□ 0.07
COL9A1-204ENST00000370496 C2CD6Q53TS8 623 aa15.49■□□□□ 0.07
COL9A1-204ENST00000370496 TMEM31Q5JXX7 168 aa15.49■□□□□ 0.07
COL9A1-204ENST00000370496 SLC26A9Q7LBE3 791 aa15.49■□□□□ 0.07
COL9A1-204ENST00000370496 TMC6Q7Z403 805 aa15.49■□□□□ 0.07
COL9A1-204ENST00000370496 XYLT1Q86Y38 959 aa15.49■□□□□ 0.07
COL9A1-204ENST00000370496 KIAA1958Q8N8K9 716 aa15.49■□□□□ 0.07
COL9A1-204ENST00000370496 FLCNQ8NFG4 579 aa15.49■□□□□ 0.07
COL9A1-204ENST00000370496 DQX1Q8TE96 717 aaKnown RBP15.49■□□□□ 0.07
COL9A1-204ENST00000370496 SYN2Q92777 582 aaPredicted RBP15.49■□□□□ 0.07
COL9A1-204ENST00000370496 PLD4Q96BZ4 506 aa15.49■□□□□ 0.07
COL9A1-204ENST00000370496 SERPINB11Q96P15 392 aa15.49■□□□□ 0.07
COL9A1-204ENST00000370496 PCDHB18PQ96TA0 734 aa15.49■□□□□ 0.07
COL9A1-204ENST00000370496 FAM83CQ9BQN1 747 aa15.49■□□□□ 0.07
COL9A1-204ENST00000370496 FAM204AQ9H8W3 233 aa15.49■□□□□ 0.07
COL9A1-204ENST00000370496 HPS4Q9NQG7 708 aa15.49■□□□□ 0.07
COL9A1-204ENST00000370496 SFMBT1Q9UHJ3 866 aa15.49■□□□□ 0.07
COL9A1-204ENST00000370496 NAALADL1Q9UQQ1 740 aa15.49■□□□□ 0.07
COL9A1-204ENST00000370496 HBS1LQ9Y450 684 aaKnown RBP15.49■□□□□ 0.07
COL9A1-204ENST00000370496 MIA3Q5JRA6 1907 aa15.49■□□□□ 0.07
COL9A1-204ENST00000370496 AP5Z1O43299 807 aa15.49■□□□□ 0.07
COL9A1-204ENST00000370496 SKILP12757 684 aa15.49■□□□□ 0.07
COL9A1-204ENST00000370496 UNGP13051 313 aaPredicted RBP15.49■□□□□ 0.07
COL9A1-204ENST00000370496 MMP8P22894 467 aa15.49■□□□□ 0.07
COL9A1-204ENST00000370496 CORO1AP31146 461 aaKnown RBP15.49■□□□□ 0.07
COL9A1-204ENST00000370496 GABRB2P47870 512 aa15.49■□□□□ 0.07
COL9A1-204ENST00000370496 SOX9P48436 509 aa15.49■□□□□ 0.07
COL9A1-204ENST00000370496 TAF5Q15542 800 aa15.49■□□□□ 0.07
COL9A1-204ENST00000370496 DCAF6Q58WW2 860 aa15.49■□□□□ 0.07
COL9A1-204ENST00000370496 IER5LQ5T953 404 aa15.49■□□□□ 0.07
COL9A1-204ENST00000370496 PPP1R2P3Q6NXS1 205 aa15.49■□□□□ 0.07
COL9A1-204ENST00000370496 BEND5Q7L4P6 421 aa15.49■□□□□ 0.07
COL9A1-204ENST00000370496 TAC4Q86UU9 113 aa15.49■□□□□ 0.07
COL9A1-204ENST00000370496 VPS36Q86VN1 386 aa15.49■□□□□ 0.07
COL9A1-204ENST00000370496 BBS7Q8IWZ6 715 aa15.49■□□□□ 0.07
COL9A1-204ENST00000370496 PBXIP1Q96AQ6 731 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms