RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 HSCBQ8IWL3 235 aa10.93□□□□□ -0.66
CLRN3-201ENST00000368671 C12orf29Q8N999 325 aa10.93□□□□□ -0.66
CLRN3-201ENST00000368671 TERB1Q8NA31 727 aa10.93□□□□□ -0.66
CLRN3-201ENST00000368671 PAGE5Q96GU1 130 aa10.93□□□□□ -0.66
CLRN3-201ENST00000368671 REPIN1Q9BWE0 567 aaKnown RBP10.93□□□□□ -0.66
CLRN3-201ENST00000368671 NUSAP1Q9BXS6 441 aaKnown RBP10.93□□□□□ -0.66
CLRN3-201ENST00000368671 FBXO44Q9H4M3 255 aa10.93□□□□□ -0.66
CLRN3-201ENST00000368671 TLR8Q9NR97 1041 aaKnown RBP10.93□□□□□ -0.66
CLRN3-201ENST00000368671 TMEM74BQ9NUR3 256 aa10.93□□□□□ -0.66
CLRN3-201ENST00000368671 DNAJC17Q9NVM6 304 aaKnown RBP10.93□□□□□ -0.66
CLRN3-201ENST00000368671 DMAC2Q9NW81 257 aa10.93□□□□□ -0.66
CLRN3-201ENST00000368671 IL37Q9NZH6 218 aa10.93□□□□□ -0.66
CLRN3-201ENST00000368671 CFAP45Q9UL16 551 aa10.93□□□□□ -0.66
CLRN3-201ENST00000368671 ADAMTS9Q9P2N4 1935 aa10.92□□□□□ -0.66
CLRN3-201ENST00000368671 FAM92AA1XBS5 289 aa10.92□□□□□ -0.66
CLRN3-201ENST00000368671 C1QTNF9BB2RNN3 333 aa10.92□□□□□ -0.66
CLRN3-201ENST00000368671 NEDD8-MDP1E9PL57 170 aa10.92□□□□□ -0.66
CLRN3-201ENST00000368671 CYP26A1O43174 497 aa10.92□□□□□ -0.66
CLRN3-201ENST00000368671 TBX18O95935 607 aa10.92□□□□□ -0.66
CLRN3-201ENST00000368671 HLA-DRAP01903 254 aa10.92□□□□□ -0.66
CLRN3-201ENST00000368671 RPN1P04843 607 aaKnown RBP10.92□□□□□ -0.66
CLRN3-201ENST00000368671 CFIP05156 583 aa10.92□□□□□ -0.66
CLRN3-201ENST00000368671 SLFN14P0C7P3 912 aa10.92□□□□□ -0.66
CLRN3-201ENST00000368671 C1QTNF9P0C862 333 aa10.92□□□□□ -0.66
CLRN3-201ENST00000368671 FAM200BP0CF97 657 aa10.92□□□□□ -0.66
CLRN3-201ENST00000368671 ENGP17813 658 aa10.92□□□□□ -0.66
CLRN3-201ENST00000368671 GABRG2P18507 467 aa10.92□□□□□ -0.66
CLRN3-201ENST00000368671 TRIM21P19474 475 aaKnown RBP10.92□□□□□ -0.66
CLRN3-201ENST00000368671 ASPAP45381 313 aa10.92□□□□□ -0.66
CLRN3-201ENST00000368671 GOLGA8FQ08AF8 430 aa10.92□□□□□ -0.66
CLRN3-201ENST00000368671 GOLGA8DPQ0D2H9 430 aa10.92□□□□□ -0.66
CLRN3-201ENST00000368671 LMAN2Q12907 356 aa10.92□□□□□ -0.66
CLRN3-201ENST00000368671 PKP1Q13835 747 aa10.92□□□□□ -0.66
CLRN3-201ENST00000368671 EGFLAMQ63HQ2 1017 aa10.92□□□□□ -0.66
CLRN3-201ENST00000368671 BLOC1S3Q6QNY0 202 aa10.92□□□□□ -0.66
CLRN3-201ENST00000368671 TPGS1Q6ZTW0 290 aa10.92□□□□□ -0.66
CLRN3-201ENST00000368671 SV2AQ7L0J3 742 aa10.92□□□□□ -0.66
CLRN3-201ENST00000368671 GPRIN1Q7Z2K8 1008 aa10.92□□□□□ -0.66
CLRN3-201ENST00000368671 UNC93AQ86WB7 457 aa10.92□□□□□ -0.66
CLRN3-201ENST00000368671 SYT12Q8IV01 421 aa10.92□□□□□ -0.66
CLRN3-201ENST00000368671 SLC9A9Q8IVB4 645 aa10.92□□□□□ -0.66
CLRN3-201ENST00000368671 CRYBG2Q8N1P7 616 aa10.92□□□□□ -0.66
CLRN3-201ENST00000368671 DEFB124Q8NES8 71 aa10.92□□□□□ -0.66
CLRN3-201ENST00000368671 SNX21Q969T3 373 aa10.92□□□□□ -0.66
CLRN3-201ENST00000368671 XPO6Q96QU8 1125 aaKnown RBP10.92□□□□□ -0.66
CLRN3-201ENST00000368671 BBS2Q9BXC9 721 aa10.92□□□□□ -0.66
CLRN3-201ENST00000368671 KLF16Q9BXK1 252 aaPredicted RBP10.92□□□□□ -0.66
CLRN3-201ENST00000368671 KCTD10Q9H3F6 313 aa10.92□□□□□ -0.66
CLRN3-201ENST00000368671 MMRN2Q9H8L6 949 aa10.92□□□□□ -0.66
CLRN3-201ENST00000368671 CSNK1G1Q9HCP0 422 aa10.92□□□□□ -0.66
CLRN3-201ENST00000368671 FSCN3Q9NQT6 498 aa10.92□□□□□ -0.66
CLRN3-201ENST00000368671 CALCOCO1Q9P1Z2 691 aa10.92□□□□□ -0.66
CLRN3-201ENST00000368671 EVLQ9UI08 416 aaPredicted RBP10.92□□□□□ -0.66
CLRN3-201ENST00000368671 LSM7Q9UK45 103 aaKnown RBP10.92□□□□□ -0.66
CLRN3-201ENST00000368671 NUDT5Q9UKK9 219 aa10.92□□□□□ -0.66
CLRN3-201ENST00000368671 ABCA7Q8IZY2 2146 aa10.91□□□□□ -0.66
CLRN3-201ENST00000368671 A0A1B0GVL5 298 aa10.91□□□□□ -0.66
CLRN3-201ENST00000368671 PDXKO00764 312 aa10.91□□□□□ -0.66
CLRN3-201ENST00000368671 MDM4O15151 490 aa10.91□□□□□ -0.66
CLRN3-201ENST00000368671 AP5Z1O43299 807 aa10.91□□□□□ -0.66
CLRN3-201ENST00000368671 CALUO43852 315 aaPredicted RBP10.91□□□□□ -0.66
CLRN3-201ENST00000368671 KIF20AO95235 890 aa10.91□□□□□ -0.66
CLRN3-201ENST00000368671 TOP3BO95985 862 aaKnown RBP10.91□□□□□ -0.66
CLRN3-201ENST00000368671 ASS1P00966 412 aaKnown RBP10.91□□□□□ -0.66
CLRN3-201ENST00000368671 PDIA4P13667 645 aaKnown RBP10.91□□□□□ -0.66
CLRN3-201ENST00000368671 CEACAM1P13688 526 aa10.91□□□□□ -0.66
CLRN3-201ENST00000368671 TYRP14679 529 aa10.91□□□□□ -0.66
CLRN3-201ENST00000368671 PFKFB1P16118 471 aa10.91□□□□□ -0.66
CLRN3-201ENST00000368671 CSRP1P21291 193 aaKnown RBP10.91□□□□□ -0.66
CLRN3-201ENST00000368671 ACO1P21399 889 aaKnown RBP10.91□□□□□ -0.66
CLRN3-201ENST00000368671 ITPKAP23677 461 aa10.91□□□□□ -0.66
CLRN3-201ENST00000368671 NTSR1P30989 418 aa10.91□□□□□ -0.66
CLRN3-201ENST00000368671 ATP5C1P36542 298 aaKnown RBP10.91□□□□□ -0.66
CLRN3-201ENST00000368671 VAMP7P51809 220 aa10.91□□□□□ -0.66
CLRN3-201ENST00000368671 COPS2P61201 443 aa10.91□□□□□ -0.66
CLRN3-201ENST00000368671 RPL6Q02878 288 aaKnown RBP10.91□□□□□ -0.66
CLRN3-201ENST00000368671 ATL3Q6DD88 541 aa10.91□□□□□ -0.66
CLRN3-201ENST00000368671 SDE2Q6IQ49 451 aa10.91□□□□□ -0.66
CLRN3-201ENST00000368671 UNQ6494/PRO21346Q6UXR6 183 aa10.91□□□□□ -0.66
CLRN3-201ENST00000368671 CLEC20AQ6ZU45 233 aa10.91□□□□□ -0.66
CLRN3-201ENST00000368671 HTR3DQ70Z44 454 aa10.91□□□□□ -0.66
CLRN3-201ENST00000368671 MIB1Q86YT6 1006 aa10.91□□□□□ -0.66
CLRN3-201ENST00000368671 CHPFQ8IZ52 775 aa10.91□□□□□ -0.66
CLRN3-201ENST00000368671 TAF4BQ92750 862 aa10.91□□□□□ -0.66
CLRN3-201ENST00000368671 TWNKQ96RR1 684 aa10.91□□□□□ -0.66
CLRN3-201ENST00000368671 ACOX2Q99424 681 aa10.91□□□□□ -0.66
CLRN3-201ENST00000368671 DUSP9Q99956 384 aaKnown RBP10.91□□□□□ -0.66
CLRN3-201ENST00000368671 GTPBP2Q9BX10 602 aaKnown RBP10.91□□□□□ -0.66
CLRN3-201ENST00000368671 NMUR1Q9HB89 426 aa10.91□□□□□ -0.66
CLRN3-201ENST00000368671 OSER1Q9NX31 292 aa10.91□□□□□ -0.66
CLRN3-201ENST00000368671 HCN2Q9UL51 889 aa10.91□□□□□ -0.66
CLRN3-201ENST00000368671 FRMD4BQ9Y2L6 1034 aa10.91□□□□□ -0.66
CLRN3-201ENST00000368671 RAD54BQ9Y620 910 aa10.91□□□□□ -0.66
CLRN3-201ENST00000368671 A0A1W2PQF6 199 aa10.9□□□□□ -0.66
CLRN3-201ENST00000368671 A0A1W2PQH9 124 aa10.9□□□□□ -0.66
CLRN3-201ENST00000368671 PRRT4C9JH25 899 aa10.9□□□□□ -0.66
CLRN3-201ENST00000368671 HHLA1C9JL84 531 aa10.9□□□□□ -0.66
CLRN3-201ENST00000368671 ZBTB24O43167 697 aaPredicted RBP10.9□□□□□ -0.66
CLRN3-201ENST00000368671 CACNG3O60359 315 aa10.9□□□□□ -0.66
CLRN3-201ENST00000368671 GREM1O60565 184 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms