RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 PLD1Q13393 1074 aa10.51□□□□□ -0.73
TPM3-210ENST00000368530 LRRC32Q14392 662 aa10.51□□□□□ -0.73
TPM3-210ENST00000368530 DGKKQ5KSL6 1271 aa10.51□□□□□ -0.73
TPM3-210ENST00000368530 C9orf57Q5W0N0 161 aa10.51□□□□□ -0.73
TPM3-210ENST00000368530 PKN3Q6P5Z2 889 aa10.51□□□□□ -0.73
TPM3-210ENST00000368530 DSTYKQ6XUX3 929 aa10.51□□□□□ -0.73
TPM3-210ENST00000368530 PRR23CQ6ZRP0 262 aa10.51□□□□□ -0.73
TPM3-210ENST00000368530 PRR23BQ6ZRT6 265 aa10.51□□□□□ -0.73
TPM3-210ENST00000368530 TMEM150AQ86TG1 271 aa10.51□□□□□ -0.73
TPM3-210ENST00000368530 LRRTM3Q86VH5 581 aa10.51□□□□□ -0.73
TPM3-210ENST00000368530 RNF10Q8N5U6 811 aaKnown RBP10.51□□□□□ -0.73
TPM3-210ENST00000368530 NETO1Q8TDF5 533 aa10.51□□□□□ -0.73
TPM3-210ENST00000368530 CAPZA3Q96KX2 299 aa10.51□□□□□ -0.73
TPM3-210ENST00000368530 TSPAN18Q96SJ8 248 aa10.51□□□□□ -0.73
TPM3-210ENST00000368530 PCDHB18PQ96TA0 734 aa10.51□□□□□ -0.73
TPM3-210ENST00000368530 SLC46A2Q9BY10 475 aa10.51□□□□□ -0.73
TPM3-210ENST00000368530 ATXN3LQ9H3M9 355 aa10.51□□□□□ -0.73
TPM3-210ENST00000368530 RAB23Q9ULC3 237 aa10.51□□□□□ -0.73
TPM3-210ENST00000368530 GRID2IPA4D2P6 1211 aa10.5□□□□□ -0.73
TPM3-210ENST00000368530 OTOL1A6NHN0 477 aaPredicted RBP10.5□□□□□ -0.73
TPM3-210ENST00000368530 ASS1P00966 412 aaKnown RBP10.5□□□□□ -0.73
TPM3-210ENST00000368530 CD58P19256 250 aa10.5□□□□□ -0.73
TPM3-210ENST00000368530 CDR1P51861 262 aa10.5□□□□□ -0.73
TPM3-210ENST00000368530 FMO1Q01740 532 aa10.5□□□□□ -0.73
TPM3-210ENST00000368530 PON2Q15165 354 aa10.5□□□□□ -0.73
TPM3-210ENST00000368530 ELF2Q15723 593 aa10.5□□□□□ -0.73
TPM3-210ENST00000368530 ZNF699Q32M78 642 aa10.5□□□□□ -0.73
TPM3-210ENST00000368530 TEX35Q5T0J7 233 aa10.5□□□□□ -0.73
TPM3-210ENST00000368530 GPR158Q5T848 1215 aa10.5□□□□□ -0.73
TPM3-210ENST00000368530 TMEM270Q6UE05 265 aa10.5□□□□□ -0.73
TPM3-210ENST00000368530 YAF2Q8IY57 180 aa10.5□□□□□ -0.73
TPM3-210ENST00000368530 FAM160A2Q8N612 972 aaPredicted RBP10.5□□□□□ -0.73
TPM3-210ENST00000368530 FAM81BQ96LP2 452 aa10.5□□□□□ -0.73
TPM3-210ENST00000368530 PSMB7Q99436 277 aa10.5□□□□□ -0.73
TPM3-210ENST00000368530 LPIN3Q9BQK8 851 aa10.5□□□□□ -0.73
TPM3-210ENST00000368530 FAM83CQ9BQN1 747 aa10.5□□□□□ -0.73
TPM3-210ENST00000368530 ZCWPW1Q9H0M4 648 aa10.5□□□□□ -0.73
TPM3-210ENST00000368530 TASP1Q9H6P5 420 aa10.5□□□□□ -0.73
TPM3-210ENST00000368530 JRKLQ9Y4A0 524 aa10.5□□□□□ -0.73
TPM3-210ENST00000368530 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.5□□□□□ -0.73
TPM3-210ENST00000368530 SAR1BQ9Y6B6 198 aa10.5□□□□□ -0.73
TPM3-210ENST00000368530 C2orf72A6NCS6 295 aa10.49□□□□□ -0.73
TPM3-210ENST00000368530 BTNL10A8MVZ5 291 aa10.49□□□□□ -0.73
TPM3-210ENST00000368530 ZNF185O15231 689 aa10.49□□□□□ -0.73
TPM3-210ENST00000368530 TADA3O75528 432 aa10.49□□□□□ -0.73
TPM3-210ENST00000368530 FTLP02792 175 aaPredicted RBP10.49□□□□□ -0.73
TPM3-210ENST00000368530 TMEM253P0C7T8 217 aa10.49□□□□□ -0.73
TPM3-210ENST00000368530 ACO1P21399 889 aaKnown RBP10.49□□□□□ -0.73
TPM3-210ENST00000368530 PAX3P23760 479 aa10.49□□□□□ -0.73
TPM3-210ENST00000368530 TBXAS1P24557 533 aaPredicted RBP10.49□□□□□ -0.73
TPM3-210ENST00000368530 CYP4F8P98187 520 aa10.49□□□□□ -0.73
TPM3-210ENST00000368530 CDR2Q01850 454 aa10.49□□□□□ -0.73
TPM3-210ENST00000368530 TUBB2AQ13885 445 aa10.49□□□□□ -0.73
TPM3-210ENST00000368530 TMEM132DQ14C87 1099 aa10.49□□□□□ -0.73
TPM3-210ENST00000368530 KYAT1Q16773 422 aa10.49□□□□□ -0.73
TPM3-210ENST00000368530 WHAMMP3Q1A5X7 153 aa10.49□□□□□ -0.73
TPM3-210ENST00000368530 ERCC6LQ2NKX8 1250 aa10.49□□□□□ -0.73
TPM3-210ENST00000368530 PPM1JQ5JR12 505 aa10.49□□□□□ -0.73
TPM3-210ENST00000368530 PAPD7Q5XG87 772 aaKnown RBP10.49□□□□□ -0.73
TPM3-210ENST00000368530 HEATR6Q6AI08 1181 aaKnown RBP10.49□□□□□ -0.73
TPM3-210ENST00000368530 WDR5BQ86VZ2 330 aa10.49□□□□□ -0.73
TPM3-210ENST00000368530 SYNPOQ8N3V7 929 aa10.49□□□□□ -0.73
TPM3-210ENST00000368530 C1orf127Q8N9H9 656 aa10.49□□□□□ -0.73
TPM3-210ENST00000368530 RBBP8NLQ8NC74 664 aaPredicted RBP10.49□□□□□ -0.73
TPM3-210ENST00000368530 RIN3Q8TB24 985 aa10.49□□□□□ -0.73
TPM3-210ENST00000368530 BPIFB1Q8TDL5 484 aa10.49□□□□□ -0.73
TPM3-210ENST00000368530 CTNNBL1Q8WYA6 563 aaPredicted RBP10.49□□□□□ -0.73
TPM3-210ENST00000368530 ARHGEF26Q96DR7 871 aa10.49□□□□□ -0.73
TPM3-210ENST00000368530 TUBB2BQ9BVA1 445 aa10.49□□□□□ -0.73
TPM3-210ENST00000368530 THAP2Q9H0W7 228 aa10.49□□□□□ -0.73
TPM3-210ENST00000368530 SMG9Q9H0W8 520 aaKnown RBP10.49□□□□□ -0.73
TPM3-210ENST00000368530 GOLPH3Q9H4A6 298 aa10.49□□□□□ -0.73
TPM3-210ENST00000368530 HPS4Q9NQG7 708 aa10.49□□□□□ -0.73
TPM3-210ENST00000368530 RXFP3Q9NSD7 469 aa10.49□□□□□ -0.73
TPM3-210ENST00000368530 WDR70Q9NW82 654 aa10.49□□□□□ -0.73
TPM3-210ENST00000368530 NXF1Q9UBU9 619 aaKnown RBP10.49□□□□□ -0.73
TPM3-210ENST00000368530 SIX4Q9UIU6 781 aa10.49□□□□□ -0.73
TPM3-210ENST00000368530 INTUQ9ULD6 942 aa10.49□□□□□ -0.73
TPM3-210ENST00000368530 PACSIN2Q9UNF0 486 aaPredicted RBP10.49□□□□□ -0.73
TPM3-210ENST00000368530 XPOTO43592 962 aaKnown RBP10.48□□□□□ -0.73
TPM3-210ENST00000368530 RTN2O75298 545 aa10.48□□□□□ -0.73
TPM3-210ENST00000368530 FGF19O95750 216 aa10.48□□□□□ -0.73
TPM3-210ENST00000368530 F11P03951 625 aa10.48□□□□□ -0.73
TPM3-210ENST00000368530 ITGB3P05106 788 aa10.48□□□□□ -0.73
TPM3-210ENST00000368530 ODC1P11926 461 aa10.48□□□□□ -0.73
TPM3-210ENST00000368530 HMGA1P17096 107 aaKnown RBP10.48□□□□□ -0.73
TPM3-210ENST00000368530 CXCR5P32302 372 aa10.48□□□□□ -0.73
TPM3-210ENST00000368530 RAP1GAPP47736 663 aa10.48□□□□□ -0.73
TPM3-210ENST00000368530 TUFMP49411 452 aaKnown RBP10.48□□□□□ -0.73
TPM3-210ENST00000368530 IFI16Q16666 785 aaKnown RBP10.48□□□□□ -0.73
TPM3-210ENST00000368530 SGSM1Q2NKQ1 1148 aa10.48□□□□□ -0.73
TPM3-210ENST00000368530 SLC39A12Q504Y0 691 aa10.48□□□□□ -0.73
TPM3-210ENST00000368530 TMEM196Q5HYL7 178 aa10.48□□□□□ -0.73
TPM3-210ENST00000368530 FSTL4Q6MZW2 842 aa10.48□□□□□ -0.73
TPM3-210ENST00000368530 ITIH5Q86UX2 942 aa10.48□□□□□ -0.73
TPM3-210ENST00000368530 CD302Q8IX05 232 aa10.48□□□□□ -0.73
TPM3-210ENST00000368530 CEP112Q8N8E3 955 aa10.48□□□□□ -0.73
TPM3-210ENST00000368530 DDX1Q92499 740 aaKnown RBP10.48□□□□□ -0.73
TPM3-210ENST00000368530 UBXN4Q92575 508 aa10.48□□□□□ -0.73
TPM3-210ENST00000368530 NIF3L1Q9GZT8 377 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms