RNA–Protein interactions for RNA: ENST00000368300.8

LMNA-206, Transcript of lamin A/C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNA, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-206ENST00000368300 KATNAL1Q9BW62 490 aa12.8□□□□□ -0.36
LMNA-206ENST00000368300 RABGEF1Q9UJ41 708 aa12.8□□□□□ -0.36
LMNA-206ENST00000368300 AP4E1Q9UPM8 1137 aa12.8□□□□□ -0.36
LMNA-206ENST00000368300 GOLGA6L7A0A1B0GV03 622 aa12.79□□□□□ -0.36
LMNA-206ENST00000368300 ZBED1O96006 694 aa12.79□□□□□ -0.36
LMNA-206ENST00000368300 CHRNA1P02708 482 aa12.79□□□□□ -0.36
LMNA-206ENST00000368300 GNAT1P11488 350 aa12.79□□□□□ -0.36
LMNA-206ENST00000368300 PTPN1P18031 435 aaKnown RBP12.79□□□□□ -0.36
LMNA-206ENST00000368300 CLCNKBP51801 687 aa12.79□□□□□ -0.36
LMNA-206ENST00000368300 E2F5Q15329 346 aa12.79□□□□□ -0.36
LMNA-206ENST00000368300 XKR4Q5GH76 650 aa12.79□□□□□ -0.36
LMNA-206ENST00000368300 SYPL2Q5VXT5 272 aa12.79□□□□□ -0.36
LMNA-206ENST00000368300 CCDC121Q6ZUS5 278 aa12.79□□□□□ -0.36
LMNA-206ENST00000368300 SLC26A9Q7LBE3 791 aa12.79□□□□□ -0.36
LMNA-206ENST00000368300 PCGF5Q86SE9 256 aa12.79□□□□□ -0.36
LMNA-206ENST00000368300 TRABD2AQ86V40 505 aa12.79□□□□□ -0.36
LMNA-206ENST00000368300 STK32AQ8WU08 396 aa12.79□□□□□ -0.36
LMNA-206ENST00000368300 SPOCK2Q92563 424 aa12.79□□□□□ -0.36
LMNA-206ENST00000368300 MIEF2Q96C03 454 aa12.79□□□□□ -0.36
LMNA-206ENST00000368300 KCTD15Q96SI1 283 aaPredicted RBP12.79□□□□□ -0.36
LMNA-206ENST00000368300 TSPYL2Q9H2G4 693 aaPredicted RBP12.79□□□□□ -0.36
LMNA-206ENST00000368300 TRABDQ9H4I3 376 aa12.79□□□□□ -0.36
LMNA-206ENST00000368300 NRDE2Q9H7Z3 1164 aa12.79□□□□□ -0.36
LMNA-206ENST00000368300 AGO3Q9H9G7 860 aaKnown RBP12.79□□□□□ -0.36
LMNA-206ENST00000368300 ZFYVE28Q9HCC9 887 aa12.79□□□□□ -0.36
LMNA-206ENST00000368300 MTMR10Q9NXD2 777 aa12.79□□□□□ -0.36
LMNA-206ENST00000368300 XPOTO43592 962 aaKnown RBP12.79□□□□□ -0.36
LMNA-206ENST00000368300 APRTP07741 180 aa12.79□□□□□ -0.36
LMNA-206ENST00000368300 GOT1P17174 413 aa12.79□□□□□ -0.36
LMNA-206ENST00000368300 STIP1P31948 543 aaKnown RBP12.79□□□□□ -0.36
LMNA-206ENST00000368300 WDR4P57081 412 aaKnown RBP12.79□□□□□ -0.36
LMNA-206ENST00000368300 MRPS6P82932 125 aaKnown RBP12.79□□□□□ -0.36
LMNA-206ENST00000368300 NME3Q13232 169 aa12.79□□□□□ -0.36
LMNA-206ENST00000368300 PDK2Q15119 407 aa12.79□□□□□ -0.36
LMNA-206ENST00000368300 AGGF1Q8N302 714 aaeCLIP12.79□□□□□ -0.369e-9■■■■■ 30.4
LMNA-206ENST00000368300 CCDC197Q8NCU1 140 aa12.79□□□□□ -0.36
LMNA-206ENST00000368300 C3orf58Q8NDZ4 430 aa12.79□□□□□ -0.36
LMNA-206ENST00000368300 TRIB2Q92519 343 aa12.79□□□□□ -0.36
LMNA-206ENST00000368300 SENP8Q96LD8 212 aa12.79□□□□□ -0.36
LMNA-206ENST00000368300 KCNK16Q96T55 309 aa12.79□□□□□ -0.36
LMNA-206ENST00000368300 RHOBTB2Q9BYZ6 727 aa12.79□□□□□ -0.36
LMNA-206ENST00000368300 FRMD8P1Q9BZ68 369 aaPredicted RBP12.79□□□□□ -0.36
LMNA-206ENST00000368300 NKIRAS1Q9NYS0 192 aa12.79□□□□□ -0.36
LMNA-206ENST00000368300 DCAF8L1A6NGE4 600 aa12.79□□□□□ -0.36
LMNA-206ENST00000368300 DNM1LO00429 736 aa12.79□□□□□ -0.36
LMNA-206ENST00000368300 FOXN2P32314 431 aa12.79□□□□□ -0.36
LMNA-206ENST00000368300 SCNN1GP51170 649 aa12.79□□□□□ -0.36
LMNA-206ENST00000368300 PCBP1Q15365 356 aaKnown RBP eCLIP12.79□□□□□ -0.368e-7■■□□□ 14
LMNA-206ENST00000368300 FAM47EQ6ZV65 393 aa12.79□□□□□ -0.36
LMNA-206ENST00000368300 HASPINQ8TF76 798 aa12.79□□□□□ -0.36
LMNA-206ENST00000368300 TNIP3Q96KP6 325 aa12.79□□□□□ -0.36
LMNA-206ENST00000368300 PPP1R10Q96QC0 940 aaKnown RBP12.79□□□□□ -0.36
LMNA-206ENST00000368300 CEP41Q9BYV8 373 aa12.79□□□□□ -0.36
LMNA-206ENST00000368300 FAM105AQ9NUU6 356 aa12.79□□□□□ -0.36
LMNA-206ENST00000368300 TMEM30AQ9NV96 361 aa12.79□□□□□ -0.36
LMNA-206ENST00000368300 DDX43Q9NXZ2 648 aaKnown RBP12.79□□□□□ -0.36
LMNA-206ENST00000368300 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.79□□□□□ -0.363e-8■■□□□ 12.4
LMNA-206ENST00000368300 MYBPHLA2RUH7 354 aa12.78□□□□□ -0.36
LMNA-206ENST00000368300 M0QZ92 97 aa12.78□□□□□ -0.36
LMNA-206ENST00000368300 RPA3P35244 121 aaPredicted RBP12.78□□□□□ -0.36
LMNA-206ENST00000368300 PNPLA4P41247 253 aa12.78□□□□□ -0.36
LMNA-206ENST00000368300 SULT1E1P49888 294 aa12.78□□□□□ -0.36
LMNA-206ENST00000368300 CACNA2D1P54289 1103 aa12.78□□□□□ -0.36
LMNA-206ENST00000368300 YWHAGP61981 247 aaKnown RBP eCLIP12.78□□□□□ -0.36
LMNA-206ENST00000368300 RNASELQ05823 741 aaKnown RBP12.78□□□□□ -0.36
LMNA-206ENST00000368300 CEP128Q6ZU80 1094 aa12.78□□□□□ -0.36
LMNA-206ENST00000368300 CFAP36Q96G28 342 aa12.78□□□□□ -0.36
LMNA-206ENST00000368300 SAMD15Q9P1V8 674 aa12.78□□□□□ -0.36
LMNA-206ENST00000368300 ENO4A6NNW6 628 aa12.78□□□□□ -0.36
LMNA-206ENST00000368300 DUSP11O75319 330 aaKnown RBP12.78□□□□□ -0.36
LMNA-206ENST00000368300 FLT3LGP49771 235 aa12.78□□□□□ -0.36
LMNA-206ENST00000368300 CAP1Q01518 475 aa12.78□□□□□ -0.36
LMNA-206ENST00000368300 SLC9A4Q6AI14 798 aa12.78□□□□□ -0.36
LMNA-206ENST00000368300 PIGWQ7Z7B1 504 aa12.78□□□□□ -0.36
LMNA-206ENST00000368300 NME8Q8N427 588 aa12.78□□□□□ -0.36
LMNA-206ENST00000368300 ATP11CQ8NB49 1132 aa12.78□□□□□ -0.36
LMNA-206ENST00000368300 TEKT4Q8WW24 435 aa12.78□□□□□ -0.36
LMNA-206ENST00000368300 CKAP2Q8WWK9 683 aa12.78□□□□□ -0.36
LMNA-206ENST00000368300 CSPG4P5Q96PW8 444 aa12.78□□□□□ -0.36
LMNA-206ENST00000368300 TGS1Q96RS0 853 aaKnown RBP12.78□□□□□ -0.36
LMNA-206ENST00000368300 C11orf84Q9BUA3 381 aaPredicted RBP12.78□□□□□ -0.36
LMNA-206ENST00000368300 FAM124BQ9H5Z6 455 aaPredicted RBP12.78□□□□□ -0.36
LMNA-206ENST00000368300 ETNK1Q9HBU6 452 aa12.78□□□□□ -0.36
LMNA-206ENST00000368300 CRTAC1Q9NQ79 661 aa12.78□□□□□ -0.36
LMNA-206ENST00000368300 KRT82Q9NSB4 513 aa12.78□□□□□ -0.36
LMNA-206ENST00000368300 GTF2IRD1Q9UHL9 959 aa12.78□□□□□ -0.36
LMNA-206ENST00000368300 EME2A4GXA9 379 aaPredicted RBP12.77□□□□□ -0.36
LMNA-206ENST00000368300 KBTBD13C9JR72 458 aa12.77□□□□□ -0.36
LMNA-206ENST00000368300 NRP1O14786 923 aa12.77□□□□□ -0.36
LMNA-206ENST00000368300 POMCP01189 267 aa12.77□□□□□ -0.36
LMNA-206ENST00000368300 KRT4P19013 534 aa12.77□□□□□ -0.36
LMNA-206ENST00000368300 AP1ARQ63HQ0 302 aa12.77□□□□□ -0.36
LMNA-206ENST00000368300 TAF2Q6P1X5 1199 aa12.77□□□□□ -0.36
LMNA-206ENST00000368300 KCNT2Q6UVM3 1135 aa12.77□□□□□ -0.36
LMNA-206ENST00000368300 TP53INP2Q8IXH6 220 aa12.77□□□□□ -0.36
LMNA-206ENST00000368300 SOCS4Q8WXH5 440 aa12.77□□□□□ -0.36
LMNA-206ENST00000368300 PAFAH2Q99487 392 aa12.77□□□□□ -0.36
LMNA-206ENST00000368300 DUSP16Q9BY84 665 aa12.77□□□□□ -0.36
LMNA-206ENST00000368300 LRRC4Q9HBW1 653 aa12.77□□□□□ -0.36
LMNA-206ENST00000368300 PIH1D1Q9NWS0 290 aaKnown RBP12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms