RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 NEK3P51956 506 aa5.35□□□□□ -1.55
RNU4-28P-201ENST00000364739 CFHR3Q02985 330 aa5.35□□□□□ -1.55
RNU4-28P-201ENST00000364739 GPS1Q13098 491 aa5.35□□□□□ -1.55
RNU4-28P-201ENST00000364739 ZNF268Q14587 947 aaPredicted RBP5.35□□□□□ -1.55
RNU4-28P-201ENST00000364739 KCNB1Q14721 858 aa5.35□□□□□ -1.55
RNU4-28P-201ENST00000364739 LARS2Q15031 903 aaKnown RBP5.35□□□□□ -1.55
RNU4-28P-201ENST00000364739 ARHGAP15Q53QZ3 475 aa5.35□□□□□ -1.55
RNU4-28P-201ENST00000364739 FAXCQ5TGI0 409 aa5.35□□□□□ -1.55
RNU4-28P-201ENST00000364739 DENND2CQ68D51 928 aa5.35□□□□□ -1.55
RNU4-28P-201ENST00000364739 ABLIM2Q6H8Q1 611 aa5.35□□□□□ -1.55
RNU4-28P-201ENST00000364739 CCDC28AQ8IWP9 274 aa5.35□□□□□ -1.55
RNU4-28P-201ENST00000364739 PNPLA1Q8N8W4 532 aa5.35□□□□□ -1.55
RNU4-28P-201ENST00000364739 CCDC150Q8NCX0 1101 aa5.35□□□□□ -1.55
RNU4-28P-201ENST00000364739 MBD3L2Q8NHZ7 208 aaPredicted RBP5.35□□□□□ -1.55
RNU4-28P-201ENST00000364739 PNISRQ8TF01 805 aaKnown RBP5.35□□□□□ -1.55
RNU4-28P-201ENST00000364739 SEMA4CQ9C0C4 833 aa5.35□□□□□ -1.55
RNU4-28P-201ENST00000364739 PCDHAC1Q9H158 963 aa5.35□□□□□ -1.55
RNU4-28P-201ENST00000364739 BTBD3Q9Y2F9 522 aa5.35□□□□□ -1.55
RNU4-28P-201ENST00000364739 CLCA1A8K7I4 914 aa5.34□□□□□ -1.55
RNU4-28P-201ENST00000364739 BTBD19C9JJ37 291 aa5.34□□□□□ -1.55
RNU4-28P-201ENST00000364739 H3BNC9 293 aa5.34□□□□□ -1.55
RNU4-28P-201ENST00000364739 MBPP02686 304 aaPredicted RBP5.34□□□□□ -1.55
RNU4-28P-201ENST00000364739 PHKG2P15735 406 aa5.34□□□□□ -1.55
RNU4-28P-201ENST00000364739 PECAM1P16284 738 aaPredicted RBP5.34□□□□□ -1.55
RNU4-28P-201ENST00000364739 ATP5F1P24539 256 aaPredicted RBP5.34□□□□□ -1.55
RNU4-28P-201ENST00000364739 GABRB3P28472 473 aa5.34□□□□□ -1.55
RNU4-28P-201ENST00000364739 ACOX1Q15067 660 aa5.34□□□□□ -1.55
RNU4-28P-201ENST00000364739 ST3GAL2Q16842 350 aa5.34□□□□□ -1.55
RNU4-28P-201ENST00000364739 ZNF425Q6IV72 752 aa5.34□□□□□ -1.55
RNU4-28P-201ENST00000364739 GLIS1Q8NBF1 620 aa5.34□□□□□ -1.55
RNU4-28P-201ENST00000364739 RIPOR3Q96MK2 946 aa5.34□□□□□ -1.55
RNU4-28P-201ENST00000364739 PRSS22Q9GZN4 317 aa5.34□□□□□ -1.55
RNU4-28P-201ENST00000364739 ZBTB26Q9HCK0 441 aa5.34□□□□□ -1.55
RNU4-28P-201ENST00000364739 STARD7Q9NQZ5 370 aa5.34□□□□□ -1.55
RNU4-28P-201ENST00000364739 FZD4Q9ULV1 537 aa5.34□□□□□ -1.55
RNU4-28P-201ENST00000364739 INO80B-WBP1J3KQ70 363 aa5.33□□□□□ -1.56
RNU4-28P-201ENST00000364739 ADAM10O14672 748 aa5.33□□□□□ -1.56
RNU4-28P-201ENST00000364739 ZSCAN9O15535 394 aaPredicted RBP5.33□□□□□ -1.56
RNU4-28P-201ENST00000364739 KCNQ3O43525 872 aa5.33□□□□□ -1.56
RNU4-28P-201ENST00000364739 NBPF7P0C2Y1 421 aaPredicted RBP5.33□□□□□ -1.56
RNU4-28P-201ENST00000364739 TMIGD3P0DMS9 266 aaPredicted RBP5.33□□□□□ -1.56
RNU4-28P-201ENST00000364739 DRD1P21728 446 aa5.33□□□□□ -1.56
RNU4-28P-201ENST00000364739 TXNL4AP83876 142 aaKnown RBP5.33□□□□□ -1.56
RNU4-28P-201ENST00000364739 BFSP2Q13515 415 aa5.33□□□□□ -1.56
RNU4-28P-201ENST00000364739 CLCA4Q14CN2 919 aa5.33□□□□□ -1.56
RNU4-28P-201ENST00000364739 Q4G0T1 1027 aa5.33□□□□□ -1.56
RNU4-28P-201ENST00000364739 AASDHQ4L235 1098 aaPredicted RBP5.33□□□□□ -1.56
RNU4-28P-201ENST00000364739 HSP90AB2PQ58FF8 381 aa5.33□□□□□ -1.56
RNU4-28P-201ENST00000364739 CC2D1BQ5T0F9 858 aaKnown RBP5.33□□□□□ -1.56
RNU4-28P-201ENST00000364739 ZNF813Q6ZN06 617 aa5.33□□□□□ -1.56
RNU4-28P-201ENST00000364739 BEND5Q7L4P6 421 aa5.33□□□□□ -1.56
RNU4-28P-201ENST00000364739 C1QL2Q7Z5L3 287 aa5.33□□□□□ -1.56
RNU4-28P-201ENST00000364739 NGDNQ8NEJ9 315 aaKnown RBP5.33□□□□□ -1.56
RNU4-28P-201ENST00000364739 OSR1Q8TAX0 266 aaPredicted RBP5.33□□□□□ -1.56
RNU4-28P-201ENST00000364739 ABHD5Q8WTS1 349 aa5.33□□□□□ -1.56
RNU4-28P-201ENST00000364739 MAP4K1Q92918 833 aa5.33□□□□□ -1.56
RNU4-28P-201ENST00000364739 ZC3H10Q96K80 434 aaKnown RBP5.33□□□□□ -1.56
RNU4-28P-201ENST00000364739 GDF15Q99988 308 aa5.33□□□□□ -1.56
RNU4-28P-201ENST00000364739 CACNA1IQ9P0X4 2223 aa5.32□□□□□ -1.56
RNU4-28P-201ENST00000364739 CYP2D7A0A087X1C5 515 aa5.32□□□□□ -1.56
RNU4-28P-201ENST00000364739 FAM234BA2RU67 622 aa5.32□□□□□ -1.56
RNU4-28P-201ENST00000364739 C16orf96A6NNT2 1141 aa5.32□□□□□ -1.56
RNU4-28P-201ENST00000364739 CCNT2O60583 730 aaKnown RBP5.32□□□□□ -1.56
RNU4-28P-201ENST00000364739 CBFA2T3O75081 653 aa5.32□□□□□ -1.56
RNU4-28P-201ENST00000364739 BCAR3O75815 825 aa5.32□□□□□ -1.56
RNU4-28P-201ENST00000364739 KRT18P05783 430 aaKnown RBP5.32□□□□□ -1.56
RNU4-28P-201ENST00000364739 MST1P26927 711 aa5.32□□□□□ -1.56
RNU4-28P-201ENST00000364739 HOXD9P28356 352 aaPredicted RBP5.32□□□□□ -1.56
RNU4-28P-201ENST00000364739 YPEL5P62699 121 aa5.32□□□□□ -1.56
RNU4-28P-201ENST00000364739 RAE1P78406 368 aaKnown RBP5.32□□□□□ -1.56
RNU4-28P-201ENST00000364739 CCDC15Q0P6D6 951 aa5.32□□□□□ -1.56
RNU4-28P-201ENST00000364739 DNASE1L3Q13609 305 aa5.32□□□□□ -1.56
RNU4-28P-201ENST00000364739 KPNB1Q14974 876 aaKnown RBP5.32□□□□□ -1.56
RNU4-28P-201ENST00000364739 SLC35G1Q2M3R5 365 aa5.32□□□□□ -1.56
RNU4-28P-201ENST00000364739 TMEM196Q5HYL7 178 aa5.32□□□□□ -1.56
RNU4-28P-201ENST00000364739 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.32□□□□□ -1.56
RNU4-28P-201ENST00000364739 TMTC4Q5T4D3 741 aa5.32□□□□□ -1.56
RNU4-28P-201ENST00000364739 SKAP1Q86WV1 359 aa5.32□□□□□ -1.56
RNU4-28P-201ENST00000364739 ZNF398Q8TD17 642 aa5.32□□□□□ -1.56
RNU4-28P-201ENST00000364739 SMG7Q92540 1137 aaKnown RBP5.32□□□□□ -1.56
RNU4-28P-201ENST00000364739 RPL36ALQ969Q0 106 aaKnown RBP5.32□□□□□ -1.56
RNU4-28P-201ENST00000364739 SNX27Q96L92 541 aa5.32□□□□□ -1.56
RNU4-28P-201ENST00000364739 COLEC11Q9BWP8 271 aa5.32□□□□□ -1.56
RNU4-28P-201ENST00000364739 C1QTNF7Q9BXJ2 289 aa5.32□□□□□ -1.56
RNU4-28P-201ENST00000364739 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.32□□□□□ -1.56
RNU4-28P-201ENST00000364739 ARNT2Q9HBZ2 717 aa5.32□□□□□ -1.56
RNU4-28P-201ENST00000364739 TMOD4Q9NZQ9 345 aa5.32□□□□□ -1.56
RNU4-28P-201ENST00000364739 PHTF1Q9UMS5 762 aa5.32□□□□□ -1.56
RNU4-28P-201ENST00000364739 ANO9A1A5B4 782 aa5.31□□□□□ -1.56
RNU4-28P-201ENST00000364739 DSCR3O14972 297 aa5.31□□□□□ -1.56
RNU4-28P-201ENST00000364739 PRC1O43663 620 aa5.31□□□□□ -1.56
RNU4-28P-201ENST00000364739 CAND2O75155 1236 aa5.31□□□□□ -1.56
RNU4-28P-201ENST00000364739 FGF18O76093 207 aa5.31□□□□□ -1.56
RNU4-28P-201ENST00000364739 TOP3BO95985 862 aaKnown RBP5.31□□□□□ -1.56
RNU4-28P-201ENST00000364739 KRTAP10-11P60412 298 aa5.31□□□□□ -1.56
RNU4-28P-201ENST00000364739 RABEP1Q15276 862 aa5.31□□□□□ -1.56
RNU4-28P-201ENST00000364739 MEX3CQ5U5Q3 659 aaKnown RBP5.31□□□□□ -1.56
RNU4-28P-201ENST00000364739 MORN5Q5VZ52 161 aa5.31□□□□□ -1.56
RNU4-28P-201ENST00000364739 PAPD7Q5XG87 772 aaKnown RBP5.31□□□□□ -1.56
RNU4-28P-201ENST00000364739 C11orf87Q6NUJ2 197 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms