RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 TSNAXIP1Q2TAA8 658 aa10.99□□□□□ -0.65
SMC3-201ENST00000361804 GJC2Q5T442 439 aaPredicted RBP10.99□□□□□ -0.65
SMC3-201ENST00000361804 VWA5B1Q5TIE3 1220 aa10.99□□□□□ -0.65
SMC3-201ENST00000361804 NIPA2Q8N8Q9 360 aa10.99□□□□□ -0.65
SMC3-201ENST00000361804 TEKT4Q8WW24 435 aa10.99□□□□□ -0.65
SMC3-201ENST00000361804 APOL6Q9BWW8 343 aa10.99□□□□□ -0.65
SMC3-201ENST00000361804 USP29Q9HBJ7 922 aa10.99□□□□□ -0.65
SMC3-201ENST00000361804 IQANK1A0A1B0GTG1 560 aa10.99□□□□□ -0.65
SMC3-201ENST00000361804 ADM5C9JUS6 153 aa10.99□□□□□ -0.65
SMC3-201ENST00000361804 RFPL1O75677 317 aa10.99□□□□□ -0.65
SMC3-201ENST00000361804 PDGFRAP16234 1089 aa10.99□□□□□ -0.65
SMC3-201ENST00000361804 KCNA4P22459 653 aa10.99□□□□□ -0.65
SMC3-201ENST00000361804 ABCG1P45844 678 aa10.99□□□□□ -0.65
SMC3-201ENST00000361804 GTF2A2P52657 109 aa10.99□□□□□ -0.65
SMC3-201ENST00000361804 RALGPS1Q5JS13 557 aa10.99□□□□□ -0.65
SMC3-201ENST00000361804 CES3Q6UWW8 571 aa10.99□□□□□ -0.65
SMC3-201ENST00000361804 LBX2Q6XYB7 198 aa10.99□□□□□ -0.65
SMC3-201ENST00000361804 SH3TC2Q8TF17 1288 aa10.99□□□□□ -0.65
SMC3-201ENST00000361804 STMN2Q93045 179 aa10.99□□□□□ -0.65
SMC3-201ENST00000361804 CCDC124Q96CT7 223 aaKnown RBP10.99□□□□□ -0.65
SMC3-201ENST00000361804 C2CD2Q9Y426 696 aa10.99□□□□□ -0.65
SMC3-201ENST00000361804 TRIP12Q14669 1992 aaPredicted RBP10.99□□□□□ -0.65
SMC3-201ENST00000361804 COL4A4P53420 1690 aaPredicted RBP10.99□□□□□ -0.65
SMC3-201ENST00000361804 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.99□□□□□ -0.65
SMC3-201ENST00000361804 OGTO15294 1046 aa10.99□□□□□ -0.65
SMC3-201ENST00000361804 PDE5AO76074 875 aa10.99□□□□□ -0.65
SMC3-201ENST00000361804 IL4RP24394 825 aa10.99□□□□□ -0.65
SMC3-201ENST00000361804 STXBP2Q15833 593 aa10.99□□□□□ -0.65
SMC3-201ENST00000361804 AMHR2Q16671 573 aa10.99□□□□□ -0.65
SMC3-201ENST00000361804 RIPOR1Q6ZS17 1223 aa10.99□□□□□ -0.65
SMC3-201ENST00000361804 FAM183BPQ6ZVS7 135 aa10.99□□□□□ -0.65
SMC3-201ENST00000361804 PCGF5Q86SE9 256 aa10.99□□□□□ -0.65
SMC3-201ENST00000361804 NDUFAF2Q8N183 169 aa10.99□□□□□ -0.65
SMC3-201ENST00000361804 GSTCDQ8NEC7 633 aa10.99□□□□□ -0.65
SMC3-201ENST00000361804 CFAP61Q8NHU2 1237 aa10.99□□□□□ -0.65
SMC3-201ENST00000361804 AGR3Q8TD06 166 aa10.99□□□□□ -0.65
SMC3-201ENST00000361804 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.99□□□□□ -0.65
SMC3-201ENST00000361804 ATXN7L3BQ96GX2 97 aa10.99□□□□□ -0.65
SMC3-201ENST00000361804 TEX13BQ9BXU2 312 aa10.99□□□□□ -0.65
SMC3-201ENST00000361804 MRPL4Q9BYD3 311 aaKnown RBP10.99□□□□□ -0.65
SMC3-201ENST00000361804 MIS12Q9H081 205 aa10.99□□□□□ -0.65
SMC3-201ENST00000361804 POPDC2Q9HBU9 364 aa10.99□□□□□ -0.65
SMC3-201ENST00000361804 FAM49BQ9NUQ9 324 aa10.99□□□□□ -0.65
SMC3-201ENST00000361804 STOML1Q9UBI4 398 aa10.99□□□□□ -0.65
SMC3-201ENST00000361804 A0A1B0GVG6 124 aa10.98□□□□□ -0.65
SMC3-201ENST00000361804 GPR25O00155 361 aa10.98□□□□□ -0.65
SMC3-201ENST00000361804 RNF8O76064 485 aa10.98□□□□□ -0.65
SMC3-201ENST00000361804 HMGB2P26583 209 aaKnown RBP10.98□□□□□ -0.65
SMC3-201ENST00000361804 PTPN7P35236 360 aa10.98□□□□□ -0.65
SMC3-201ENST00000361804 INHBEP58166 350 aa10.98□□□□□ -0.65
SMC3-201ENST00000361804 YWHAEP62258 255 aaKnown RBP10.98□□□□□ -0.65
SMC3-201ENST00000361804 RPL10AP62906 217 aaKnown RBP10.98□□□□□ -0.65
SMC3-201ENST00000361804 GBE1Q04446 702 aa10.98□□□□□ -0.65
SMC3-201ENST00000361804 SLC34A1Q06495 639 aa10.98□□□□□ -0.65
SMC3-201ENST00000361804 JADE1Q6IE81 842 aa10.98□□□□□ -0.65
SMC3-201ENST00000361804 UNC5AQ6ZN44 842 aa10.98□□□□□ -0.65
SMC3-201ENST00000361804 CEP128Q6ZU80 1094 aa10.98□□□□□ -0.65
SMC3-201ENST00000361804 SCUBE3Q8IX30 993 aa10.98□□□□□ -0.65
SMC3-201ENST00000361804 CMASQ8NFW8 434 aaPredicted RBP10.98□□□□□ -0.65
SMC3-201ENST00000361804 CLEC4CQ8WTT0 213 aa10.98□□□□□ -0.65
SMC3-201ENST00000361804 PYDC1Q8WXC3 89 aa10.98□□□□□ -0.65
SMC3-201ENST00000361804 C6orf222P0C671 652 aaPredicted RBP10.98□□□□□ -0.65
SMC3-201ENST00000361804 ACADSP16219 412 aa10.98□□□□□ -0.65
SMC3-201ENST00000361804 YBX3P16989 372 aaKnown RBP eCLIP10.98□□□□□ -0.656e-7■■■■□ 19.3
SMC3-201ENST00000361804 ICAM3P32942 547 aa10.98□□□□□ -0.65
SMC3-201ENST00000361804 OAZ1P54368 228 aa10.98□□□□□ -0.65
SMC3-201ENST00000361804 POLE2P56282 527 aa10.98□□□□□ -0.65
SMC3-201ENST00000361804 SLC18A2Q05940 514 aa10.98□□□□□ -0.65
SMC3-201ENST00000361804 PTPN11Q06124 597 aaPredicted RBP10.98□□□□□ -0.65
SMC3-201ENST00000361804 EML3Q32P44 896 aa10.98□□□□□ -0.65
SMC3-201ENST00000361804 PLD5Q8N7P1 536 aa10.98□□□□□ -0.65
SMC3-201ENST00000361804 FBXO41Q8TF61 875 aa10.98□□□□□ -0.65
SMC3-201ENST00000361804 ZNF778Q96MU6 729 aa10.98□□□□□ -0.65
SMC3-201ENST00000361804 CYP4F11Q9HBI6 524 aa10.98□□□□□ -0.65
SMC3-201ENST00000361804 TMPRSS4Q9NRS4 437 aa10.98□□□□□ -0.65
SMC3-201ENST00000361804 ZNF358Q9NW07 568 aa10.98□□□□□ -0.65
SMC3-201ENST00000361804 GJD2Q9UKL4 321 aa10.98□□□□□ -0.65
SMC3-201ENST00000361804 PCDHGC3Q9UN70 934 aa10.98□□□□□ -0.65
SMC3-201ENST00000361804 DNAJC25-GNG10A0A024R161 153 aa10.98□□□□□ -0.65
SMC3-201ENST00000361804 H0YCG3 227 aa10.98□□□□□ -0.65
SMC3-201ENST00000361804 DKC1O60832 514 aaKnown RBP eCLIP10.98□□□□□ -0.65
SMC3-201ENST00000361804 KRT81Q14533 505 aa10.98□□□□□ -0.65
SMC3-201ENST00000361804 NOMO1Q15155 1222 aa10.98□□□□□ -0.65
SMC3-201ENST00000361804 ZNF667Q5HYK9 610 aa10.98□□□□□ -0.65
SMC3-201ENST00000361804 AEBP2Q6ZN18 517 aaPredicted RBP10.98□□□□□ -0.65
SMC3-201ENST00000361804 NUDCD3Q8IVD9 361 aa10.98□□□□□ -0.65
SMC3-201ENST00000361804 PQLC3Q8N755 202 aa10.98□□□□□ -0.65
SMC3-201ENST00000361804 E2F7Q96AV8 911 aa10.98□□□□□ -0.65
SMC3-201ENST00000361804 SLC7A8Q9UHI5 535 aa10.98□□□□□ -0.65
SMC3-201ENST00000361804 CITO14578 2027 aa10.97□□□□□ -0.65
SMC3-201ENST00000361804 LACTBL1A8MY62 500 aa10.97□□□□□ -0.65
SMC3-201ENST00000361804 MAFGO15525 162 aa10.97□□□□□ -0.65
SMC3-201ENST00000361804 CDH5P33151 784 aaPredicted RBP10.97□□□□□ -0.65
SMC3-201ENST00000361804 EPHB1P54762 984 aa10.97□□□□□ -0.65
SMC3-201ENST00000361804 SLC10A2Q12908 348 aaPredicted RBP10.97□□□□□ -0.65
SMC3-201ENST00000361804 OR52E8Q6IFG1 317 aa10.97□□□□□ -0.65
SMC3-201ENST00000361804 IZUMO2Q6UXV1 221 aa10.97□□□□□ -0.65
SMC3-201ENST00000361804 DENND5BQ6ZUT9 1274 aa10.97□□□□□ -0.65
SMC3-201ENST00000361804 SLC26A11Q86WA9 606 aa10.97□□□□□ -0.65
SMC3-201ENST00000361804 PCDH19Q8TAB3 1148 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms