RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 TSPAN3O60637 253 aa11.28□□□□□ -0.6
CLIP1-203ENST00000361654 ENO1P06733 434 aaKnown RBP11.28□□□□□ -0.6
CLIP1-203ENST00000361654 PTPN11Q06124 597 aaPredicted RBP11.28□□□□□ -0.6
CLIP1-203ENST00000361654 TRIP4Q15650 581 aaPredicted RBP11.28□□□□□ -0.6
CLIP1-203ENST00000361654 CYP2A13Q16696 494 aa11.28□□□□□ -0.6
CLIP1-203ENST00000361654 C3orf20Q8ND61 904 aa11.28□□□□□ -0.6
CLIP1-203ENST00000361654 SYN2Q92777 582 aaPredicted RBP11.28□□□□□ -0.6
CLIP1-203ENST00000361654 LENG9Q96B70 501 aa11.28□□□□□ -0.6
CLIP1-203ENST00000361654 TMEM237Q96Q45 408 aa11.28□□□□□ -0.6
CLIP1-203ENST00000361654 AGO4Q9HCK5 861 aaKnown RBP11.28□□□□□ -0.6
CLIP1-203ENST00000361654 TLL1O43897 1013 aa11.27□□□□□ -0.6
CLIP1-203ENST00000361654 SERPINB8P50452 374 aa11.27□□□□□ -0.6
CLIP1-203ENST00000361654 ALDH5A1P51649 535 aaPredicted RBP11.27□□□□□ -0.6
CLIP1-203ENST00000361654 VSNL1P62760 191 aa11.27□□□□□ -0.6
CLIP1-203ENST00000361654 UBE3AQ05086 875 aa11.27□□□□□ -0.6
CLIP1-203ENST00000361654 CCDC142Q17RM4 750 aa11.27□□□□□ -0.6
CLIP1-203ENST00000361654 CBWD3Q5JTY5 395 aa11.27□□□□□ -0.6
CLIP1-203ENST00000361654 CBWD5Q5RIA9 395 aa11.27□□□□□ -0.6
CLIP1-203ENST00000361654 FKBP1CQ5VVH2 108 aa11.27□□□□□ -0.6
CLIP1-203ENST00000361654 ADCK1Q86TW2 530 aa11.27□□□□□ -0.6
CLIP1-203ENST00000361654 B3GALNT2Q8NCR0 500 aa11.27□□□□□ -0.6
CLIP1-203ENST00000361654 OLFM3Q96PB7 478 aa11.27□□□□□ -0.6
CLIP1-203ENST00000361654 ILKAPQ9H0C8 392 aaPredicted RBP11.27□□□□□ -0.6
CLIP1-203ENST00000361654 CTNNAL1Q9UBT7 734 aa11.27□□□□□ -0.6
CLIP1-203ENST00000361654 RPTORQ8N122 1335 aa11.27□□□□□ -0.6
CLIP1-203ENST00000361654 POLR1AO95602 1720 aaPredicted RBP11.27□□□□□ -0.6
CLIP1-203ENST00000361654 TMEM114B3SHH9 223 aa11.27□□□□□ -0.6
CLIP1-203ENST00000361654 JCHAINP01591 159 aa11.27□□□□□ -0.6
CLIP1-203ENST00000361654 SERPINA4P29622 427 aa11.27□□□□□ -0.6
CLIP1-203ENST00000361654 CCZ1BP86790 482 aa11.27□□□□□ -0.6
CLIP1-203ENST00000361654 CCZ1P86791 482 aaPredicted RBP11.27□□□□□ -0.6
CLIP1-203ENST00000361654 DENND5BQ6ZUT9 1274 aa11.27□□□□□ -0.6
CLIP1-203ENST00000361654 SPATA21Q7Z572 469 aa11.27□□□□□ -0.6
CLIP1-203ENST00000361654 ADI1Q9BV57 179 aa11.27□□□□□ -0.6
CLIP1-203ENST00000361654 PHACTR1Q9C0D0 580 aa11.27□□□□□ -0.6
CLIP1-203ENST00000361654 NEK6Q9HC98 313 aa11.27□□□□□ -0.6
CLIP1-203ENST00000361654 SNX12Q9UMY4 172 aa11.27□□□□□ -0.6
CLIP1-203ENST00000361654 TDRKHQ9Y2W6 561 aaKnown RBP11.27□□□□□ -0.6
CLIP1-203ENST00000361654 PCDHGA4Q9Y5G9 962 aa11.27□□□□□ -0.6
CLIP1-203ENST00000361654 ALG6Q9Y672 507 aa11.27□□□□□ -0.6
CLIP1-203ENST00000361654 PREX2Q70Z35 1606 aa11.27□□□□□ -0.61
CLIP1-203ENST00000361654 ADCY10Q96PN6 1610 aa11.27□□□□□ -0.61
CLIP1-203ENST00000361654 SEC24DO94855 1032 aaPredicted RBP11.27□□□□□ -0.61
CLIP1-203ENST00000361654 ARP10275 920 aa11.27□□□□□ -0.61
CLIP1-203ENST00000361654 FAM46CQ5VWP2 391 aa11.27□□□□□ -0.61
CLIP1-203ENST00000361654 NT5DC3Q86UY8 548 aa11.27□□□□□ -0.61
CLIP1-203ENST00000361654 SGF29Q96ES7 293 aa11.27□□□□□ -0.61
CLIP1-203ENST00000361654 PNMA5Q96PV4 448 aa11.27□□□□□ -0.61
CLIP1-203ENST00000361654 ROPN1BQ9BZX4 212 aaPredicted RBP11.27□□□□□ -0.61
CLIP1-203ENST00000361654 ROPN1Q9HAT0 212 aaPredicted RBP11.27□□□□□ -0.61
CLIP1-203ENST00000361654 GLRA3O75311 464 aa11.27□□□□□ -0.61
CLIP1-203ENST00000361654 GRK4P32298 578 aa11.27□□□□□ -0.61
CLIP1-203ENST00000361654 ZNF135P52742 658 aaPredicted RBP11.27□□□□□ -0.61
CLIP1-203ENST00000361654 CYP24A1Q07973 514 aa11.27□□□□□ -0.61
CLIP1-203ENST00000361654 LY6KQ17RY6 165 aa11.27□□□□□ -0.61
CLIP1-203ENST00000361654 INTS5Q6P9B9 1019 aaKnown RBP11.27□□□□□ -0.61
CLIP1-203ENST00000361654 C11orf74Q86VG3 221 aa11.27□□□□□ -0.61
CLIP1-203ENST00000361654 CCDC134Q9H6E4 229 aa11.27□□□□□ -0.61
CLIP1-203ENST00000361654 RBM22Q9NW64 420 aaKnown RBP eCLIP11.27□□□□□ -0.612e-7■■■□□ 15.8
CLIP1-203ENST00000361654 DCDC2Q9UHG0 476 aa11.27□□□□□ -0.61
CLIP1-203ENST00000361654 BARX2Q9UMQ3 279 aaPredicted RBP11.27□□□□□ -0.61
CLIP1-203ENST00000361654 HPS5Q9UPZ3 1129 aa11.27□□□□□ -0.61
CLIP1-203ENST00000361654 ARL2BPQ9Y2Y0 163 aa11.27□□□□□ -0.61
CLIP1-203ENST00000361654 MTO1Q9Y2Z2 717 aaKnown RBP11.27□□□□□ -0.61
CLIP1-203ENST00000361654 MED14O60244 1454 aa11.27□□□□□ -0.61
CLIP1-203ENST00000361654 DAB1O75553 588 aa11.27□□□□□ -0.61
CLIP1-203ENST00000361654 GGCXP38435 758 aa11.27□□□□□ -0.61
CLIP1-203ENST00000361654 PWP1Q13610 501 aa11.27□□□□□ -0.61
CLIP1-203ENST00000361654 CNGA3Q16281 694 aa11.27□□□□□ -0.61
CLIP1-203ENST00000361654 IYDQ6PHW0 289 aa11.27□□□□□ -0.61
CLIP1-203ENST00000361654 E2F7Q96AV8 911 aa11.27□□□□□ -0.61
CLIP1-203ENST00000361654 EME1Q96AY2 570 aa11.27□□□□□ -0.61
CLIP1-203ENST00000361654 QRFPRQ96P65 431 aa11.27□□□□□ -0.61
CLIP1-203ENST00000361654 C2orf49Q9BVC5 232 aaPredicted RBP11.27□□□□□ -0.61
CLIP1-203ENST00000361654 SOX13Q9UN79 622 aa11.27□□□□□ -0.61
CLIP1-203ENST00000361654 GAKO14976 1311 aa11.27□□□□□ -0.61
CLIP1-203ENST00000361654 SF3B1O75533 1304 aaKnown RBP eCLIP11.27□□□□□ -0.618e-7■■■■■ 170.2
CLIP1-203ENST00000361654 TRPM1Q7Z4N2 1603 aa11.27□□□□□ -0.61
CLIP1-203ENST00000361654 A0A1W2PQJ5 194 aa11.26□□□□□ -0.61
CLIP1-203ENST00000361654 OR6A2O95222 327 aa11.26□□□□□ -0.61
CLIP1-203ENST00000361654 STAU1O95793 577 aaKnown RBP11.26□□□□□ -0.61
CLIP1-203ENST00000361654 CHKAP35790 457 aa11.26□□□□□ -0.61
CLIP1-203ENST00000361654 Q4G0T1 1027 aa11.26□□□□□ -0.61
CLIP1-203ENST00000361654 EPC2Q52LR7 807 aa11.26□□□□□ -0.61
CLIP1-203ENST00000361654 WLSQ5T9L3 541 aa11.26□□□□□ -0.61
CLIP1-203ENST00000361654 USP45Q70EL2 814 aa11.26□□□□□ -0.61
CLIP1-203ENST00000361654 OTOAQ7RTW8 1153 aa11.26□□□□□ -0.61
CLIP1-203ENST00000361654 FAM131BQ86XD5 332 aa11.26□□□□□ -0.61
CLIP1-203ENST00000361654 LGI2Q8N0V4 545 aa11.26□□□□□ -0.61
CLIP1-203ENST00000361654 TINF2Q9BSI4 451 aa11.26□□□□□ -0.61
CLIP1-203ENST00000361654 EPB41L4AQ9HCS5 686 aaPredicted RBP11.26□□□□□ -0.61
CLIP1-203ENST00000361654 TNFSF13BQ9Y275 285 aa11.26□□□□□ -0.61
CLIP1-203ENST00000361654 MAGEB16A2A368 324 aa11.26□□□□□ -0.61
CLIP1-203ENST00000361654 IL1R1P14778 569 aa11.26□□□□□ -0.61
CLIP1-203ENST00000361654 ALG11Q2TAA5 492 aa11.26□□□□□ -0.61
CLIP1-203ENST00000361654 FGD2Q7Z6J4 655 aa11.26□□□□□ -0.61
CLIP1-203ENST00000361654 PALB2Q86YC2 1186 aa11.26□□□□□ -0.61
CLIP1-203ENST00000361654 CYP4Z2PQ8N1L4 340 aa11.26□□□□□ -0.61
CLIP1-203ENST00000361654 GLMNQ92990 594 aa11.26□□□□□ -0.61
CLIP1-203ENST00000361654 EPN3Q9H201 632 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms