RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 DPP7Q9UHL4 492 aa20.9■□□□□ 0.94
CDC42BPB-201ENST00000361246 EIF3LQ9Y262 564 aaKnown RBP20.9■□□□□ 0.94
CDC42BPB-201ENST00000361246 FAM205AQ6ZU69 1335 aa20.9■□□□□ 0.94
CDC42BPB-201ENST00000361246 GARTP22102 1010 aa20.89■□□□□ 0.94
CDC42BPB-201ENST00000361246 CCR1P32246 355 aa20.89■□□□□ 0.94
CDC42BPB-201ENST00000361246 AGAP9Q5VTM2 703 aa20.89■□□□□ 0.94
CDC42BPB-201ENST00000361246 CD44P16070 742 aaKnown RBP20.89■□□□□ 0.94
CDC42BPB-201ENST00000361246 ZNF677Q86XU0 584 aa20.89■□□□□ 0.94
CDC42BPB-201ENST00000361246 AASDHPPTQ9NRN7 309 aa20.89■□□□□ 0.94
CDC42BPB-201ENST00000361246 RIC8BQ9NVN3 520 aa20.89■□□□□ 0.94
CDC42BPB-201ENST00000361246 ZNHIT2Q9UHR6 403 aa20.89■□□□□ 0.94
CDC42BPB-201ENST00000361246 CCNG1P51959 295 aa20.89■□□□□ 0.93
CDC42BPB-201ENST00000361246 EDRF1Q3B7T1 1238 aa20.89■□□□□ 0.93
CDC42BPB-201ENST00000361246 WDR49Q8IV35 697 aa20.89■□□□□ 0.93
CDC42BPB-201ENST00000361246 GMCL1Q96IK5 515 aa20.89■□□□□ 0.93
CDC42BPB-201ENST00000361246 GYPCP04921 128 aa20.89■□□□□ 0.93
CDC42BPB-201ENST00000361246 SETD3Q86TU7 594 aaPredicted RBP20.89■□□□□ 0.93
CDC42BPB-201ENST00000361246 VPS37AQ8NEZ2 397 aa20.89■□□□□ 0.93
CDC42BPB-201ENST00000361246 CAAP1Q9H8G2 361 aa20.89■□□□□ 0.93
CDC42BPB-201ENST00000361246 GLT6D1Q7Z4J2 308 aa20.89■□□□□ 0.93
CDC42BPB-201ENST00000361246 FBXO36Q8NEA4 188 aa20.89■□□□□ 0.93
CDC42BPB-201ENST00000361246 MDM1Q8TC05 714 aa20.89■□□□□ 0.93
CDC42BPB-201ENST00000361246 PPP1R2P1Q96PQ5 205 aa20.89■□□□□ 0.93
CDC42BPB-201ENST00000361246 CRTAMO95727 393 aa20.89■□□□□ 0.93
CDC42BPB-201ENST00000361246 FBXL19Q6PCT2 694 aa20.89■□□□□ 0.93
CDC42BPB-201ENST00000361246 ZSCAN2Q7Z7L9 614 aaPredicted RBP20.89■□□□□ 0.93
CDC42BPB-201ENST00000361246 DENND1CQ8IV53 801 aa20.89■□□□□ 0.93
CDC42BPB-201ENST00000361246 SH3BP4Q9P0V3 963 aa20.89■□□□□ 0.93
CDC42BPB-201ENST00000361246 CXCL11O14625 94 aa20.88■□□□□ 0.93
CDC42BPB-201ENST00000361246 SETMARQ53H47 684 aaPredicted RBP20.88■□□□□ 0.93
CDC42BPB-201ENST00000361246 DUSP10Q9Y6W6 482 aa20.88■□□□□ 0.93
CDC42BPB-201ENST00000361246 GMFGO60234 142 aa20.88■□□□□ 0.93
CDC42BPB-201ENST00000361246 PRKAR2AP13861 404 aaKnown RBP20.88■□□□□ 0.93
CDC42BPB-201ENST00000361246 STIP1P31948 543 aaKnown RBP20.88■□□□□ 0.93
CDC42BPB-201ENST00000361246 DDR1Q08345 913 aa20.88■□□□□ 0.93
CDC42BPB-201ENST00000361246 TRAPPC5Q8IUR0 188 aa20.88■□□□□ 0.93
CDC42BPB-201ENST00000361246 NOP53Q9NZM5 478 aaKnown RBP20.88■□□□□ 0.93
CDC42BPB-201ENST00000361246 LGALS2P05162 132 aa20.88■□□□□ 0.93
CDC42BPB-201ENST00000361246 XRCC4Q13426 336 aa20.88■□□□□ 0.93
CDC42BPB-201ENST00000361246 TFDP3Q5H9I0 405 aa20.88■□□□□ 0.93
CDC42BPB-201ENST00000361246 DENND1BQ6P3S1 775 aa20.88■□□□□ 0.93
CDC42BPB-201ENST00000361246 SUSD6Q92537 303 aa20.88■□□□□ 0.93
CDC42BPB-201ENST00000361246 VIL1P09327 827 aaKnown RBP20.88■□□□□ 0.93
CDC42BPB-201ENST00000361246 TSGA10IPQ3SY00 556 aa20.88■□□□□ 0.93
CDC42BPB-201ENST00000361246 RAD9BQ6WBX8 426 aa20.88■□□□□ 0.93
CDC42BPB-201ENST00000361246 LRRN4Q8WUT4 740 aa20.88■□□□□ 0.93
CDC42BPB-201ENST00000361246 KCNB2Q92953 911 aa20.88■□□□□ 0.93
CDC42BPB-201ENST00000361246 ALDH8A1Q9H2A2 487 aaPredicted RBP20.88■□□□□ 0.93
CDC42BPB-201ENST00000361246 MIEF1Q9NQG6 463 aa20.88■□□□□ 0.93
CDC42BPB-201ENST00000361246 BAZ2BQ9UIF8 2168 aaKnown RBP20.88■□□□□ 0.93
CDC42BPB-201ENST00000361246 RECQL4O94761 1208 aa20.88■□□□□ 0.93
CDC42BPB-201ENST00000361246 TPCN2Q8NHX9 752 aa20.88■□□□□ 0.93
CDC42BPB-201ENST00000361246 SMARCD1Q96GM5 515 aa20.88■□□□□ 0.93
CDC42BPB-201ENST00000361246 ADAM21Q9UKJ8 722 aa20.88■□□□□ 0.93
CDC42BPB-201ENST00000361246 TBC1D12O60347 775 aa20.87■□□□□ 0.93
CDC42BPB-201ENST00000361246 ATP5HO75947 161 aa20.87■□□□□ 0.93
CDC42BPB-201ENST00000361246 SMIM10L2AP0DMW4 78 aa20.87■□□□□ 0.93
CDC42BPB-201ENST00000361246 SMIM10L2BP0DMW5 78 aa20.87■□□□□ 0.93
CDC42BPB-201ENST00000361246 MUTP22033 750 aa20.87■□□□□ 0.93
CDC42BPB-201ENST00000361246 FDFT1P37268 417 aa20.87■□□□□ 0.93
CDC42BPB-201ENST00000361246 SERPINB4P48594 390 aa20.87■□□□□ 0.93
CDC42BPB-201ENST00000361246 Q4G0T1 1027 aa20.87■□□□□ 0.93
CDC42BPB-201ENST00000361246 CACHD1Q5VU97 1274 aa20.87■□□□□ 0.93
CDC42BPB-201ENST00000361246 KIF2BQ8N4N8 673 aa20.87■□□□□ 0.93
CDC42BPB-201ENST00000361246 MANSC1Q9H8J5 431 aa20.87■□□□□ 0.93
CDC42BPB-201ENST00000361246 BPIFA1Q9NP55 256 aa20.87■□□□□ 0.93
CDC42BPB-201ENST00000361246 FAM86B1E9PN63 330 aa20.87■□□□□ 0.93
CDC42BPB-201ENST00000361246 FAM86B2P0C5J1 330 aa20.87■□□□□ 0.93
CDC42BPB-201ENST00000361246 AMPD1P23109 780 aa20.87■□□□□ 0.93
CDC42BPB-201ENST00000361246 GTF2E2P29084 291 aaKnown RBP20.87■□□□□ 0.93
CDC42BPB-201ENST00000361246 PTPN11Q06124 597 aaPredicted RBP20.87■□□□□ 0.93
CDC42BPB-201ENST00000361246 TROAPQ12815 778 aa20.87■□□□□ 0.93
CDC42BPB-201ENST00000361246 SLC27A1Q6PCB7 646 aa20.87■□□□□ 0.93
CDC42BPB-201ENST00000361246 OTOP2Q7RTS6 562 aa20.87■□□□□ 0.93
CDC42BPB-201ENST00000361246 ADCK1Q86TW2 530 aa20.87■□□□□ 0.93
CDC42BPB-201ENST00000361246 CCDC60Q8IWA6 550 aaPredicted RBP20.87■□□□□ 0.93
CDC42BPB-201ENST00000361246 CD99L2Q8TCZ2 262 aa20.87■□□□□ 0.93
CDC42BPB-201ENST00000361246 ZNF333Q96JL9 665 aa20.87■□□□□ 0.93
CDC42BPB-201ENST00000361246 RAMP2O60895 175 aa20.87■□□□□ 0.93
CDC42BPB-201ENST00000361246 KHDRBS2Q5VWX1 349 aaKnown RBP20.87■□□□□ 0.93
CDC42BPB-201ENST00000361246 PTF1AQ7RTS3 328 aa20.87■□□□□ 0.93
CDC42BPB-201ENST00000361246 RPAINQ86UA6 219 aa20.87■□□□□ 0.93
CDC42BPB-201ENST00000361246 PLD3Q8IV08 490 aa20.87■□□□□ 0.93
CDC42BPB-201ENST00000361246 USP6NLQ92738 828 aa20.87■□□□□ 0.93
CDC42BPB-201ENST00000361246 OSBPL1AQ9BXW6 950 aa20.87■□□□□ 0.93
CDC42BPB-201ENST00000361246 ZNF229Q9UJW7 825 aa20.87■□□□□ 0.93
CDC42BPB-201ENST00000361246 MRPS23Q9Y3D9 190 aaKnown RBP20.87■□□□□ 0.93
CDC42BPB-201ENST00000361246 PTPRUQ92729 1446 aa20.87■□□□□ 0.93
CDC42BPB-201ENST00000361246 TISP43B9A030 160 aa20.87■□□□□ 0.93
CDC42BPB-201ENST00000361246 NR5A2O00482 541 aa20.87■□□□□ 0.93
CDC42BPB-201ENST00000361246 WDR47O94967 919 aa20.87■□□□□ 0.93
CDC42BPB-201ENST00000361246 RRM1P23921 792 aa20.87■□□□□ 0.93
CDC42BPB-201ENST00000361246 GPR142Q7Z601 462 aa20.87■□□□□ 0.93
CDC42BPB-201ENST00000361246 C17orf75Q9HAS0 396 aa20.87■□□□□ 0.93
CDC42BPB-201ENST00000361246 ITGA11Q9UKX5 1188 aa20.87■□□□□ 0.93
CDC42BPB-201ENST00000361246 GSNP06396 782 aa20.87■□□□□ 0.93
CDC42BPB-201ENST00000361246 AMD1P17707 334 aa20.87■□□□□ 0.93
CDC42BPB-201ENST00000361246 ATP6V1C1P21283 382 aa20.87■□□□□ 0.93
CDC42BPB-201ENST00000361246 NUDT2P50583 147 aa20.87■□□□□ 0.93
CDC42BPB-201ENST00000361246 CD302Q8IX05 232 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms