RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 GEMIN8Q9NWZ8 242 aaKnown RBP23.5■■□□□ 1.35
LDB1-201ENST00000361198 SENP1Q9P0U3 644 aa23.5■■□□□ 1.35
LDB1-201ENST00000361198 CDY2AQ9Y6F7 541 aa23.5■■□□□ 1.35
LDB1-201ENST00000361198 E7ESA3 106 aa23.49■■□□□ 1.35
LDB1-201ENST00000361198 EZRP15311 586 aaKnown RBP23.49■■□□□ 1.35
LDB1-201ENST00000361198 LRPAP1P30533 357 aa23.49■■□□□ 1.35
LDB1-201ENST00000361198 SSTR1P30872 391 aa23.49■■□□□ 1.35
LDB1-201ENST00000361198 MRPS6P82932 125 aaKnown RBP23.49■■□□□ 1.35
LDB1-201ENST00000361198 CXCL17Q6UXB2 119 aa23.49■■□□□ 1.35
LDB1-201ENST00000361198 TOP6BLQ8N6T0 577 aa23.49■■□□□ 1.35
LDB1-201ENST00000361198 HSFY1Q96LI6 401 aa23.49■■□□□ 1.35
LDB1-201ENST00000361198 ZNF670Q9BS34 389 aa23.49■■□□□ 1.35
LDB1-201ENST00000361198 CYLDQ9NQC7 956 aa23.49■■□□□ 1.35
LDB1-201ENST00000361198 TGM2P21980 687 aa23.49■■□□□ 1.35
LDB1-201ENST00000361198 WARSP23381 471 aaKnown RBP23.49■■□□□ 1.35
LDB1-201ENST00000361198 ACAT1P24752 427 aaKnown RBP23.49■■□□□ 1.35
LDB1-201ENST00000361198 SKIV2L2P42285 1042 aaKnown RBP23.49■■□□□ 1.35
LDB1-201ENST00000361198 ARCQ7LC44 396 aa23.49■■□□□ 1.35
LDB1-201ENST00000361198 WNT8BQ93098 351 aa23.49■■□□□ 1.35
LDB1-201ENST00000361198 MYCBPQ99417 103 aaPredicted RBP23.49■■□□□ 1.35
LDB1-201ENST00000361198 GTF2IRD1Q9UHL9 959 aa23.49■■□□□ 1.35
LDB1-201ENST00000361198 ZMYND8Q9ULU4 1186 aaPredicted RBP23.49■■□□□ 1.35
LDB1-201ENST00000361198 STARD13Q9Y3M8 1113 aa23.49■■□□□ 1.35
LDB1-201ENST00000361198 CYB561D2O14569 222 aa23.48■■□□□ 1.35
LDB1-201ENST00000361198 SCNN1AP37088 669 aa23.48■■□□□ 1.35
LDB1-201ENST00000361198 ACADSBP45954 432 aa23.48■■□□□ 1.35
LDB1-201ENST00000361198 NBPF20Q3BBV1 942 aa23.48■■□□□ 1.35
LDB1-201ENST00000361198 PIGZQ86VD9 579 aa23.48■■□□□ 1.35
LDB1-201ENST00000361198 VSIG1Q86XK7 387 aa23.48■■□□□ 1.35
LDB1-201ENST00000361198 FAF2Q96CS3 445 aa23.48■■□□□ 1.35
LDB1-201ENST00000361198 KLHL29Q96CT2 875 aa23.48■■□□□ 1.35
LDB1-201ENST00000361198 MRRFQ96E11 262 aaKnown RBP23.48■■□□□ 1.35
LDB1-201ENST00000361198 ST3GAL5Q9UNP4 418 aa23.48■■□□□ 1.35
LDB1-201ENST00000361198 SCN10AQ9Y5Y9 1956 aa23.48■■□□□ 1.35
LDB1-201ENST00000361198 CLDN5O00501 218 aa23.48■■□□□ 1.35
LDB1-201ENST00000361198 PGK1P00558 417 aa23.48■■□□□ 1.35
LDB1-201ENST00000361198 CCNB1P14635 433 aa23.48■■□□□ 1.35
LDB1-201ENST00000361198 L1CAMP32004 1257 aa23.48■■□□□ 1.35
LDB1-201ENST00000361198 AFF1P51825 1210 aaKnown RBP23.48■■□□□ 1.35
LDB1-201ENST00000361198 SYCP2LQ5T4T6 812 aa23.48■■□□□ 1.35
LDB1-201ENST00000361198 WSCD1Q658N2 575 aa23.48■■□□□ 1.35
LDB1-201ENST00000361198 ECHDC2Q86YB7 292 aa23.48■■□□□ 1.35
LDB1-201ENST00000361198 PDIK1LQ8N165 341 aa23.48■■□□□ 1.35
LDB1-201ENST00000361198 ANKLE1Q8NAG6 615 aa23.48■■□□□ 1.35
LDB1-201ENST00000361198 FBXO36Q8NEA4 188 aa23.48■■□□□ 1.35
LDB1-201ENST00000361198 GSTCDQ8NEC7 633 aa23.48■■□□□ 1.35
LDB1-201ENST00000361198 LRRN4Q8WUT4 740 aa23.48■■□□□ 1.35
LDB1-201ENST00000361198 NDRG1Q92597 394 aaKnown RBP23.48■■□□□ 1.35
LDB1-201ENST00000361198 DHX35Q9H5Z1 703 aaKnown RBP23.48■■□□□ 1.35
LDB1-201ENST00000361198 SMG5Q9UPR3 1016 aaKnown RBP23.48■■□□□ 1.35
LDB1-201ENST00000361198 M0QZ92 97 aa23.47■■□□□ 1.35
LDB1-201ENST00000361198 SMAPO00193 183 aa23.47■■□□□ 1.35
LDB1-201ENST00000361198 KCNN4O15554 427 aa23.47■■□□□ 1.35
LDB1-201ENST00000361198 SLC10A3P09131 477 aa23.47■■□□□ 1.35
LDB1-201ENST00000361198 CTSHP09668 335 aa23.47■■□□□ 1.35
LDB1-201ENST00000361198 RARBP10826 455 aa23.47■■□□□ 1.35
LDB1-201ENST00000361198 CYP2F1P24903 491 aa23.47■■□□□ 1.35
LDB1-201ENST00000361198 RBL1P28749 1068 aa23.47■■□□□ 1.35
LDB1-201ENST00000361198 DPYSL2Q16555 572 aa23.47■■□□□ 1.35
LDB1-201ENST00000361198 BBS9Q3SYG4 887 aa23.47■■□□□ 1.35
LDB1-201ENST00000361198 GDF6Q6KF10 455 aaPredicted RBP23.47■■□□□ 1.35
LDB1-201ENST00000361198 HNRNPABQ99729 332 aaKnown RBP23.47■■□□□ 1.35
LDB1-201ENST00000361198 MTG1Q9BT17 334 aaPredicted RBP23.47■■□□□ 1.35
LDB1-201ENST00000361198 TRABDQ9H4I3 376 aa23.47■■□□□ 1.35
LDB1-201ENST00000361198 SLC24A2Q9UI40 661 aa23.47■■□□□ 1.35
LDB1-201ENST00000361198 RABGEF1Q9UJ41 708 aa23.47■■□□□ 1.35
LDB1-201ENST00000361198 BRCA2P51587 3418 aa23.47■■□□□ 1.35
LDB1-201ENST00000361198 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP23.47■■□□□ 1.35
LDB1-201ENST00000361198 XPO1O14980 1071 aaKnown RBP23.47■■□□□ 1.35
LDB1-201ENST00000361198 BEST1O76090 585 aa23.47■■□□□ 1.35
LDB1-201ENST00000361198 GJA9P57773 515 aa23.47■■□□□ 1.35
LDB1-201ENST00000361198 INHBEP58166 350 aa23.47■■□□□ 1.35
LDB1-201ENST00000361198 C3orf62Q6ZUJ4 267 aa23.47■■□□□ 1.35
LDB1-201ENST00000361198 ATP11CQ8NB49 1132 aa23.47■■□□□ 1.35
LDB1-201ENST00000361198 DNAI2Q9GZS0 605 aa23.47■■□□□ 1.35
LDB1-201ENST00000361198 NRDE2Q9H7Z3 1164 aa23.47■■□□□ 1.35
LDB1-201ENST00000361198 FAM105AQ9NUU6 356 aa23.47■■□□□ 1.35
LDB1-201ENST00000361198 MTMR10Q9NXD2 777 aa23.47■■□□□ 1.35
LDB1-201ENST00000361198 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.47■■□□□ 1.35
LDB1-201ENST00000361198 MLH1P40692 756 aa23.46■■□□□ 1.35
LDB1-201ENST00000361198 ADIGQ0VDE8 80 aa23.46■■□□□ 1.35
LDB1-201ENST00000361198 SPARCL1Q14515 664 aa23.46■■□□□ 1.35
LDB1-201ENST00000361198 KCNJ11Q14654 390 aa23.46■■□□□ 1.35
LDB1-201ENST00000361198 PKN2Q16513 984 aaKnown RBP23.46■■□□□ 1.35
LDB1-201ENST00000361198 PAQR9Q6ZVX9 377 aa23.46■■□□□ 1.35
LDB1-201ENST00000361198 CCDC185Q8N715 623 aa23.46■■□□□ 1.35
LDB1-201ENST00000361198 DUSP16Q9BY84 665 aa23.46■■□□□ 1.35
LDB1-201ENST00000361198 TSPYL2Q9H2G4 693 aaPredicted RBP23.46■■□□□ 1.35
LDB1-201ENST00000361198 FETUBQ9UGM5 382 aa23.46■■□□□ 1.35
LDB1-201ENST00000361198 AP4E1Q9UPM8 1137 aa23.46■■□□□ 1.35
LDB1-201ENST00000361198 TRPV2Q9Y5S1 764 aa23.46■■□□□ 1.35
LDB1-201ENST00000361198 PIAS1O75925 651 aa23.45■■□□□ 1.35
LDB1-201ENST00000361198 CYBAP13498 195 aa23.45■■□□□ 1.35
LDB1-201ENST00000361198 PTPN1P18031 435 aaKnown RBP23.45■■□□□ 1.35
LDB1-201ENST00000361198 RNASELQ05823 741 aaKnown RBP23.45■■□□□ 1.35
LDB1-201ENST00000361198 E2F5Q15329 346 aa23.45■■□□□ 1.35
LDB1-201ENST00000361198 EFHC2Q5JST6 749 aa23.45■■□□□ 1.35
LDB1-201ENST00000361198 PLCD3Q8N3E9 789 aa23.45■■□□□ 1.35
LDB1-201ENST00000361198 RTP4Q96DX8 246 aa23.45■■□□□ 1.35
LDB1-201ENST00000361198 KIF9Q9HAQ2 790 aa23.45■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms