RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 GMIPQ9P107 970 aa6.36□□□□□ -1.39
CDC42SE2-201ENST00000360515 MAGEC2Q9UBF1 373 aaPredicted RBP6.36□□□□□ -1.39
CDC42SE2-201ENST00000360515 DMTF1Q9Y222 760 aa6.36□□□□□ -1.39
CDC42SE2-201ENST00000360515 PCDHA5Q9Y5H7 936 aa6.36□□□□□ -1.39
CDC42SE2-201ENST00000360515 CSNK1G3Q9Y6M4 447 aa6.36□□□□□ -1.39
CDC42SE2-201ENST00000360515 PCSK5Q92824 1860 aa6.36□□□□□ -1.39
CDC42SE2-201ENST00000360515 PRPF40AO75400 957 aaKnown RBP6.36□□□□□ -1.39
CDC42SE2-201ENST00000360515 CD82P27701 267 aa6.36□□□□□ -1.39
CDC42SE2-201ENST00000360515 POSTNQ15063 836 aa6.36□□□□□ -1.39
CDC42SE2-201ENST00000360515 SOWAHAQ2M3V2 549 aa6.36□□□□□ -1.39
CDC42SE2-201ENST00000360515 LY6G5CQ5SRR4 150 aa6.36□□□□□ -1.39
CDC42SE2-201ENST00000360515 HES3Q5TGS1 186 aa6.36□□□□□ -1.39
CDC42SE2-201ENST00000360515 ARL6IP4Q66PJ3 421 aaKnown RBP6.36□□□□□ -1.39
CDC42SE2-201ENST00000360515 ATG14Q6ZNE5 492 aa6.36□□□□□ -1.39
CDC42SE2-201ENST00000360515 DENND5BQ6ZUT9 1274 aa6.36□□□□□ -1.39
CDC42SE2-201ENST00000360515 TRIM69Q86WT6 500 aa6.36□□□□□ -1.39
CDC42SE2-201ENST00000360515 TTC17Q96AE7 1141 aa6.36□□□□□ -1.39
CDC42SE2-201ENST00000360515 LIN37Q96GY3 246 aaPredicted RBP6.36□□□□□ -1.39
CDC42SE2-201ENST00000360515 PNMA5Q96PV4 448 aa6.36□□□□□ -1.39
CDC42SE2-201ENST00000360515 LLPHQ9BRT6 129 aaKnown RBP6.36□□□□□ -1.39
CDC42SE2-201ENST00000360515 SIX4Q9UIU6 781 aa6.36□□□□□ -1.39
CDC42SE2-201ENST00000360515 SCML2Q9UQR0 700 aa6.36□□□□□ -1.39
CDC42SE2-201ENST00000360515 INVSQ9Y283 1065 aa6.36□□□□□ -1.39
CDC42SE2-201ENST00000360515 CPQQ9Y646 472 aa6.36□□□□□ -1.39
CDC42SE2-201ENST00000360515 H0Y8X5 98 aa6.35□□□□□ -1.39
CDC42SE2-201ENST00000360515 GPR15P49685 360 aa6.35□□□□□ -1.39
CDC42SE2-201ENST00000360515 MFAP3P55082 362 aa6.35□□□□□ -1.39
CDC42SE2-201ENST00000360515 USP46P62068 366 aa6.35□□□□□ -1.39
CDC42SE2-201ENST00000360515 SURF1Q15526 300 aa6.35□□□□□ -1.39
CDC42SE2-201ENST00000360515 PNPLA1Q8N8W4 532 aa6.35□□□□□ -1.39
CDC42SE2-201ENST00000360515 OR2I1PQ8NGU4 316 aa6.35□□□□□ -1.39
CDC42SE2-201ENST00000360515 AK8Q96MA6 479 aa6.35□□□□□ -1.39
CDC42SE2-201ENST00000360515 DEPDC7Q96QD5 511 aa6.35□□□□□ -1.39
CDC42SE2-201ENST00000360515 MMS19Q96T76 1030 aa6.35□□□□□ -1.39
CDC42SE2-201ENST00000360515 BHMT2Q9H2M3 363 aa6.35□□□□□ -1.39
CDC42SE2-201ENST00000360515 KCNJ14Q9UNX9 436 aa6.35□□□□□ -1.39
CDC42SE2-201ENST00000360515 DNM3Q9UQ16 869 aa6.35□□□□□ -1.39
CDC42SE2-201ENST00000360515 PCDHB6Q9Y5E3 794 aa6.35□□□□□ -1.39
CDC42SE2-201ENST00000360515 WIPF3A6NGB9 483 aa6.35□□□□□ -1.39
CDC42SE2-201ENST00000360515 COCHO43405 550 aa6.35□□□□□ -1.39
CDC42SE2-201ENST00000360515 LDHAP00338 332 aaKnown RBP6.35□□□□□ -1.39
CDC42SE2-201ENST00000360515 SEC13P55735 322 aa6.35□□□□□ -1.39
CDC42SE2-201ENST00000360515 TARDBPQ13148 414 aaKnown RBP eCLIP6.35□□□□□ -1.39
CDC42SE2-201ENST00000360515 C10orf76Q5T2E6 689 aa6.35□□□□□ -1.39
CDC42SE2-201ENST00000360515 C1orf127Q8N9H9 656 aa6.35□□□□□ -1.39
CDC42SE2-201ENST00000360515 MFSD2AQ8NA29 543 aa6.35□□□□□ -1.39
CDC42SE2-201ENST00000360515 STKLD1Q8NE28 680 aa6.35□□□□□ -1.39
CDC42SE2-201ENST00000360515 TPCN2Q8NHX9 752 aa6.35□□□□□ -1.39
CDC42SE2-201ENST00000360515 CNDP2Q96KP4 475 aaKnown RBP6.35□□□□□ -1.39
CDC42SE2-201ENST00000360515 AIFM3Q96NN9 605 aa6.35□□□□□ -1.39
CDC42SE2-201ENST00000360515 CYP2S1Q96SQ9 504 aa6.35□□□□□ -1.39
CDC42SE2-201ENST00000360515 FUCA2Q9BTY2 467 aa6.35□□□□□ -1.39
CDC42SE2-201ENST00000360515 ANO2Q9NQ90 1003 aa6.35□□□□□ -1.39
CDC42SE2-201ENST00000360515 GEMIN8Q9NWZ8 242 aaKnown RBP6.35□□□□□ -1.39
CDC42SE2-201ENST00000360515 CLIC5Q9NZA1 410 aa6.35□□□□□ -1.39
CDC42SE2-201ENST00000360515 BCCIPQ9P287 314 aaKnown RBP eCLIP6.35□□□□□ -1.39
CDC42SE2-201ENST00000360515 CYP8B1Q9UNU6 501 aa6.35□□□□□ -1.39
CDC42SE2-201ENST00000360515 MAN2B2Q9Y2E5 1009 aa6.35□□□□□ -1.39
CDC42SE2-201ENST00000360515 NME7Q9Y5B8 376 aa6.35□□□□□ -1.39
CDC42SE2-201ENST00000360515 ANTXRLA6NF34 631 aa6.34□□□□□ -1.39
CDC42SE2-201ENST00000360515 CYP2F1P24903 491 aa6.34□□□□□ -1.39
CDC42SE2-201ENST00000360515 ITGB7P26010 798 aa6.34□□□□□ -1.39
CDC42SE2-201ENST00000360515 RPS14P62263 151 aaKnown RBP6.34□□□□□ -1.39
CDC42SE2-201ENST00000360515 ANKRD1Q15327 319 aa6.34□□□□□ -1.39
CDC42SE2-201ENST00000360515 SF3A1Q15459 793 aaKnown RBP6.34□□□□□ -1.39
CDC42SE2-201ENST00000360515 OR4C6Q8NH72 309 aa6.34□□□□□ -1.39
CDC42SE2-201ENST00000360515 CACTINQ8WUQ7 758 aaKnown RBP6.34□□□□□ -1.39
CDC42SE2-201ENST00000360515 GTF3C6Q969F1 213 aa6.34□□□□□ -1.39
CDC42SE2-201ENST00000360515 TMEM159Q96B96 161 aa6.34□□□□□ -1.39
CDC42SE2-201ENST00000360515 P2RY11Q96G91 374 aa6.34□□□□□ -1.39
CDC42SE2-201ENST00000360515 JAKMIP1Q96N16 626 aaKnown RBP6.34□□□□□ -1.39
CDC42SE2-201ENST00000360515 NCOA5Q9HCD5 579 aaKnown RBP6.34□□□□□ -1.39
CDC42SE2-201ENST00000360515 USP3Q9Y6I4 520 aa6.34□□□□□ -1.39
CDC42SE2-201ENST00000360515 HHLA1C9JL84 531 aa6.34□□□□□ -1.39
CDC42SE2-201ENST00000360515 MAGEC1O60732 1142 aa6.34□□□□□ -1.39
CDC42SE2-201ENST00000360515 CKMP06732 381 aa6.34□□□□□ -1.39
CDC42SE2-201ENST00000360515 GLDCP23378 1020 aa6.34□□□□□ -1.39
CDC42SE2-201ENST00000360515 ATICP31939 592 aa6.34□□□□□ -1.39
CDC42SE2-201ENST00000360515 CLN3Q13286 438 aa6.34□□□□□ -1.39
CDC42SE2-201ENST00000360515 IL17AQ16552 155 aa6.34□□□□□ -1.39
CDC42SE2-201ENST00000360515 BMT2Q1RMZ1 405 aa6.34□□□□□ -1.39
CDC42SE2-201ENST00000360515 KCNT1Q5JUK3 1230 aa6.34□□□□□ -1.39
CDC42SE2-201ENST00000360515 TRMT1LQ7Z2T5 733 aaKnown RBP6.34□□□□□ -1.39
CDC42SE2-201ENST00000360515 ADGRF2Q8IZF7 708 aa6.34□□□□□ -1.39
CDC42SE2-201ENST00000360515 NUP93Q8N1F7 819 aa6.34□□□□□ -1.39
CDC42SE2-201ENST00000360515 ZCCHC9Q8N567 271 aaKnown RBP6.34□□□□□ -1.39
CDC42SE2-201ENST00000360515 NSUN7Q8NE18 718 aaKnown RBP6.34□□□□□ -1.39
CDC42SE2-201ENST00000360515 ASB12Q8WXK4 309 aa6.34□□□□□ -1.39
CDC42SE2-201ENST00000360515 CCDC43Q96MW1 224 aaKnown RBP6.34□□□□□ -1.39
CDC42SE2-201ENST00000360515 RAB34Q9BZG1 259 aa6.34□□□□□ -1.39
CDC42SE2-201ENST00000360515 LHX5Q9H2C1 402 aa6.34□□□□□ -1.39
CDC42SE2-201ENST00000360515 PABPC3Q9H361 631 aaKnown RBP6.34□□□□□ -1.39
CDC42SE2-201ENST00000360515 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.34□□□□□ -1.39
CDC42SE2-201ENST00000360515 OLFML3Q9NRN5 406 aa6.34□□□□□ -1.39
CDC42SE2-201ENST00000360515 DDX43Q9NXZ2 648 aaKnown RBP6.34□□□□□ -1.39
CDC42SE2-201ENST00000360515 CFAP97Q9P2B7 532 aa6.34□□□□□ -1.39
CDC42SE2-201ENST00000360515 LARSQ9P2J5 1176 aaKnown RBP6.34□□□□□ -1.39
CDC42SE2-201ENST00000360515 TIMM13Q9Y5L4 95 aaPredicted RBP6.34□□□□□ -1.39
CDC42SE2-201ENST00000360515 FREM2Q5SZK8 3169 aa6.34□□□□□ -1.39
CDC42SE2-201ENST00000360515 TARSL2A2RTX5 802 aaKnown RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms