RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 FLT3P36888 993 aa12.97□□□□□ -0.33
NIF3L1-201ENST00000359683 MTHFRP42898 656 aa12.97□□□□□ -0.33
NIF3L1-201ENST00000359683 HADHBP55084 474 aaKnown RBP12.97□□□□□ -0.33
NIF3L1-201ENST00000359683 KIF5AQ12840 1032 aa12.97□□□□□ -0.33
NIF3L1-201ENST00000359683 HECTD3Q5T447 861 aa12.97□□□□□ -0.33
NIF3L1-201ENST00000359683 SYPL2Q5VXT5 272 aa12.97□□□□□ -0.33
NIF3L1-201ENST00000359683 MSANTD2Q6P1R3 559 aa12.97□□□□□ -0.33
NIF3L1-201ENST00000359683 DCUN1D2Q6PH85 259 aa12.97□□□□□ -0.33
NIF3L1-201ENST00000359683 KLHDC10Q6PID8 442 aa12.97□□□□□ -0.33
NIF3L1-201ENST00000359683 EMC1Q8N766 993 aa12.97□□□□□ -0.33
NIF3L1-201ENST00000359683 FNIP1Q8TF40 1166 aa12.97□□□□□ -0.33
NIF3L1-201ENST00000359683 RXFP2Q8WXD0 754 aa12.97□□□□□ -0.33
NIF3L1-201ENST00000359683 EDEM1Q92611 657 aa12.97□□□□□ -0.33
NIF3L1-201ENST00000359683 MRPS31Q92665 395 aaKnown RBP12.97□□□□□ -0.33
NIF3L1-201ENST00000359683 NT5C3BQ969T7 300 aa12.97□□□□□ -0.33
NIF3L1-201ENST00000359683 MCEEQ96PE7 176 aa12.97□□□□□ -0.33
NIF3L1-201ENST00000359683 GCNAQ96QF7 691 aa12.97□□□□□ -0.33
NIF3L1-201ENST00000359683 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.97□□□□□ -0.33
NIF3L1-201ENST00000359683 CTTNBP2NLQ9P2B4 639 aa12.97□□□□□ -0.33
NIF3L1-201ENST00000359683 CD207Q9UJ71 328 aa12.97□□□□□ -0.33
NIF3L1-201ENST00000359683 CDH22Q9UJ99 828 aa12.97□□□□□ -0.33
NIF3L1-201ENST00000359683 SALL4Q9UJQ4 1053 aa12.97□□□□□ -0.33
NIF3L1-201ENST00000359683 MRPS23Q9Y3D9 190 aaKnown RBP12.97□□□□□ -0.33
NIF3L1-201ENST00000359683 DUSP10Q9Y6W6 482 aa12.97□□□□□ -0.33
NIF3L1-201ENST00000359683 XIRP2A4UGR9 3374 aa12.97□□□□□ -0.33
NIF3L1-201ENST00000359683 TLR5O60602 858 aa12.96□□□□□ -0.33
NIF3L1-201ENST00000359683 OAS1P00973 400 aaKnown RBP12.96□□□□□ -0.33
NIF3L1-201ENST00000359683 NCAM1P13591 858 aa12.96□□□□□ -0.33
NIF3L1-201ENST00000359683 PDGFRAP16234 1089 aa12.96□□□□□ -0.33
NIF3L1-201ENST00000359683 FSHRP23945 695 aa12.96□□□□□ -0.33
NIF3L1-201ENST00000359683 DDX6P26196 483 aaKnown RBP eCLIP12.96□□□□□ -0.33
NIF3L1-201ENST00000359683 ARHGAP25P42331 645 aa12.96□□□□□ -0.33
NIF3L1-201ENST00000359683 CYP4F8P98187 520 aa12.96□□□□□ -0.33
NIF3L1-201ENST00000359683 OGDHQ02218 1023 aa12.96□□□□□ -0.33
NIF3L1-201ENST00000359683 DCAF6Q58WW2 860 aa12.96□□□□□ -0.33
NIF3L1-201ENST00000359683 TXNDC8Q6A555 127 aa12.96□□□□□ -0.33
NIF3L1-201ENST00000359683 REXO1L1PQ8IX06 675 aa12.96□□□□□ -0.33
NIF3L1-201ENST00000359683 ITFG1Q8TB96 612 aa12.96□□□□□ -0.33
NIF3L1-201ENST00000359683 ZNF564Q8TBZ8 553 aaPredicted RBP12.96□□□□□ -0.33
NIF3L1-201ENST00000359683 SUSD6Q92537 303 aa12.96□□□□□ -0.33
NIF3L1-201ENST00000359683 RIPOR3Q96MK2 946 aa12.96□□□□□ -0.33
NIF3L1-201ENST00000359683 CDK5RAP1Q96SZ6 601 aaKnown RBP12.96□□□□□ -0.33
NIF3L1-201ENST00000359683 NPY6RQ99463 290 aa12.96□□□□□ -0.33
NIF3L1-201ENST00000359683 SLC46A2Q9BY10 475 aa12.96□□□□□ -0.33
NIF3L1-201ENST00000359683 TRIM7Q9C029 511 aa12.96□□□□□ -0.33
NIF3L1-201ENST00000359683 TASP1Q9H6P5 420 aa12.96□□□□□ -0.33
NIF3L1-201ENST00000359683 CCSER2Q9H7U1 834 aa12.96□□□□□ -0.33
NIF3L1-201ENST00000359683 OSGEPQ9NPF4 335 aa12.96□□□□□ -0.33
NIF3L1-201ENST00000359683 OLA1Q9NTK5 396 aaKnown RBP12.96□□□□□ -0.33
NIF3L1-201ENST00000359683 RRN3Q9NYV6 651 aa12.96□□□□□ -0.33
NIF3L1-201ENST00000359683 ZMYM5Q9UJ78 669 aa12.96□□□□□ -0.33
NIF3L1-201ENST00000359683 OBSL1O75147 1896 aa12.96□□□□□ -0.33
NIF3L1-201ENST00000359683 CLUHO75153 1309 aa12.96□□□□□ -0.34
NIF3L1-201ENST00000359683 C2orf78A6NCI8 922 aa12.95□□□□□ -0.34
NIF3L1-201ENST00000359683 H3BQ06 376 aaPredicted RBP12.95□□□□□ -0.34
NIF3L1-201ENST00000359683 DPYSL4O14531 572 aa12.95□□□□□ -0.34
NIF3L1-201ENST00000359683 CAPN9O14815 690 aa12.95□□□□□ -0.34
NIF3L1-201ENST00000359683 ZSCAN12O43309 604 aa12.95□□□□□ -0.34
NIF3L1-201ENST00000359683 OLFM2O95897 454 aa12.95□□□□□ -0.34
NIF3L1-201ENST00000359683 TBX18O95935 607 aa12.95□□□□□ -0.34
NIF3L1-201ENST00000359683 GPD1P21695 349 aa12.95□□□□□ -0.34
NIF3L1-201ENST00000359683 ATP5C1P36542 298 aaKnown RBP12.95□□□□□ -0.34
NIF3L1-201ENST00000359683 PTPN9P43378 593 aa12.95□□□□□ -0.34
NIF3L1-201ENST00000359683 ZNF143P52747 638 aaPredicted RBP12.95□□□□□ -0.34
NIF3L1-201ENST00000359683 EIF4EBP2Q13542 120 aaPredicted RBP12.95□□□□□ -0.34
NIF3L1-201ENST00000359683 TEAD2Q15562 447 aa12.95□□□□□ -0.34
NIF3L1-201ENST00000359683 SLC25A52Q3SY17 297 aa12.95□□□□□ -0.34
NIF3L1-201ENST00000359683 CCDC14Q49A88 953 aa12.95□□□□□ -0.34
NIF3L1-201ENST00000359683 ARHGAP15Q53QZ3 475 aa12.95□□□□□ -0.34
NIF3L1-201ENST00000359683 GPR158Q5T848 1215 aa12.95□□□□□ -0.34
NIF3L1-201ENST00000359683 BNIPLQ7Z465 357 aa12.95□□□□□ -0.34
NIF3L1-201ENST00000359683 TADA2BQ86TJ2 420 aa12.95□□□□□ -0.34
NIF3L1-201ENST00000359683 RNF139Q8WU17 664 aa12.95□□□□□ -0.34
NIF3L1-201ENST00000359683 TRIM44Q96DX7 344 aaPredicted RBP12.95□□□□□ -0.34
NIF3L1-201ENST00000359683 CALR3Q96L12 384 aaKnown RBP12.95□□□□□ -0.34
NIF3L1-201ENST00000359683 NECTIN4Q96NY8 510 aa12.95□□□□□ -0.34
NIF3L1-201ENST00000359683 TSGA10Q9BZW7 698 aa12.95□□□□□ -0.34
NIF3L1-201ENST00000359683 RNF38Q9H0F5 515 aa12.95□□□□□ -0.34
NIF3L1-201ENST00000359683 TRIM10Q9UDY6 481 aa12.95□□□□□ -0.34
NIF3L1-201ENST00000359683 NUDT5Q9UKK9 219 aa12.95□□□□□ -0.34
NIF3L1-201ENST00000359683 BDP1A6H8Y1 2624 aa12.95□□□□□ -0.34
NIF3L1-201ENST00000359683 MYO1FO00160 1098 aa12.95□□□□□ -0.34
NIF3L1-201ENST00000359683 COCHO43405 550 aa12.95□□□□□ -0.34
NIF3L1-201ENST00000359683 KRT86O43790 486 aa12.95□□□□□ -0.34
NIF3L1-201ENST00000359683 ENDOD1O94919 500 aa12.95□□□□□ -0.34
NIF3L1-201ENST00000359683 IGLV3-25P01717 112 aa12.95□□□□□ -0.34
NIF3L1-201ENST00000359683 CEBPBP17676 345 aa12.95□□□□□ -0.34
NIF3L1-201ENST00000359683 HDCP19113 662 aa12.95□□□□□ -0.34
NIF3L1-201ENST00000359683 KCNA5P22460 613 aa12.95□□□□□ -0.34
NIF3L1-201ENST00000359683 SDC4P31431 198 aa12.95□□□□□ -0.34
NIF3L1-201ENST00000359683 NOP2P46087 812 aaKnown RBP12.95□□□□□ -0.34
NIF3L1-201ENST00000359683 PITX1P78337 314 aaPredicted RBP12.95□□□□□ -0.34
NIF3L1-201ENST00000359683 ZNF252P-AS1Q0IIN9 211 aa12.95□□□□□ -0.34
NIF3L1-201ENST00000359683 CLUL1Q15846 466 aa12.95□□□□□ -0.34
NIF3L1-201ENST00000359683 C10orf120Q5SQS8 335 aa12.95□□□□□ -0.34
NIF3L1-201ENST00000359683 STXBP5Q5T5C0 1151 aa12.95□□□□□ -0.34
NIF3L1-201ENST00000359683 RSRC2Q7L4I2 434 aaKnown RBP12.95□□□□□ -0.34
NIF3L1-201ENST00000359683 RNF10Q8N5U6 811 aaKnown RBP12.95□□□□□ -0.34
NIF3L1-201ENST00000359683 MAB21L3Q8N8X9 362 aa12.95□□□□□ -0.34
NIF3L1-201ENST00000359683 KIAA1524Q8TCG1 905 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms