RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 BCAT1P54687 386 aa12.67□□□□□ -0.38
COL20A1-201ENST00000358894 SLC1A5Q15758 541 aa12.67□□□□□ -0.38
COL20A1-201ENST00000358894 PDK4Q16654 411 aa12.67□□□□□ -0.38
COL20A1-201ENST00000358894 ARMCX6Q7L4S7 300 aa12.67□□□□□ -0.38
COL20A1-201ENST00000358894 TMEM109Q9BVC6 243 aa12.67□□□□□ -0.38
COL20A1-201ENST00000358894 TJP2Q9UDY2 1190 aa12.67□□□□□ -0.38
COL20A1-201ENST00000358894 ITGA11Q9UKX5 1188 aa12.67□□□□□ -0.38
COL20A1-201ENST00000358894 TIMM13Q9Y5L4 95 aaPredicted RBP12.67□□□□□ -0.38
COL20A1-201ENST00000358894 ACTL7BQ9Y614 415 aa12.67□□□□□ -0.38
COL20A1-201ENST00000358894 ZNF541Q9H0D2 1346 aa12.67□□□□□ -0.38
COL20A1-201ENST00000358894 ERBB2P04626 1255 aa12.66□□□□□ -0.38
COL20A1-201ENST00000358894 CCDC130P13994 396 aa12.66□□□□□ -0.38
COL20A1-201ENST00000358894 PTPN4P29074 926 aa12.66□□□□□ -0.38
COL20A1-201ENST00000358894 NRLP54845 237 aa12.66□□□□□ -0.38
COL20A1-201ENST00000358894 USP10Q14694 798 aaKnown RBP12.66□□□□□ -0.38
COL20A1-201ENST00000358894 TAF5Q15542 800 aa12.66□□□□□ -0.38
COL20A1-201ENST00000358894 FBXO47Q5MNV8 452 aa12.66□□□□□ -0.38
COL20A1-201ENST00000358894 ANKRD20A2Q5SQ80 823 aa12.66□□□□□ -0.38
COL20A1-201ENST00000358894 ANKRD20A1Q5TYW2 823 aa12.66□□□□□ -0.38
COL20A1-201ENST00000358894 ACAD11Q709F0 780 aa12.66□□□□□ -0.38
COL20A1-201ENST00000358894 APOPT1Q96IL0 206 aa12.66□□□□□ -0.38
COL20A1-201ENST00000358894 TASP1Q9H6P5 420 aa12.66□□□□□ -0.38
COL20A1-201ENST00000358894 RMI1Q9H9A7 625 aa12.66□□□□□ -0.38
COL20A1-201ENST00000358894 SLC17A7Q9P2U7 560 aa12.66□□□□□ -0.38
COL20A1-201ENST00000358894 IPO11Q9UI26 975 aaKnown RBP12.66□□□□□ -0.38
COL20A1-201ENST00000358894 SLC39A10Q9ULF5 831 aa12.66□□□□□ -0.38
COL20A1-201ENST00000358894 TNFSF13BQ9Y275 285 aa12.66□□□□□ -0.38
COL20A1-201ENST00000358894 AFG3L2Q9Y4W6 797 aa12.66□□□□□ -0.38
COL20A1-201ENST00000358894 MAFBQ9Y5Q3 323 aaPredicted RBP12.66□□□□□ -0.38
COL20A1-201ENST00000358894 PAPPAQ13219 1627 aa12.66□□□□□ -0.38
COL20A1-201ENST00000358894 A8MUI8 341 aa12.66□□□□□ -0.38
COL20A1-201ENST00000358894 FCHO1O14526 889 aa12.66□□□□□ -0.38
COL20A1-201ENST00000358894 USP12O75317 370 aa12.66□□□□□ -0.38
COL20A1-201ENST00000358894 PHEXP78562 749 aa12.66□□□□□ -0.38
COL20A1-201ENST00000358894 GRIK4Q16099 956 aa12.66□□□□□ -0.38
COL20A1-201ENST00000358894 MYLK4Q86YV6 388 aaPredicted RBP12.66□□□□□ -0.38
COL20A1-201ENST00000358894 COLGALT1Q8NBJ5 622 aa12.66□□□□□ -0.38
COL20A1-201ENST00000358894 MTMR14Q8NCE2 650 aa12.66□□□□□ -0.38
COL20A1-201ENST00000358894 VPS39Q96JC1 886 aa12.66□□□□□ -0.38
COL20A1-201ENST00000358894 SNRNP25Q9BV90 132 aaKnown RBP12.66□□□□□ -0.38
COL20A1-201ENST00000358894 ADARB2Q9NS39 739 aaKnown RBP12.66□□□□□ -0.38
COL20A1-201ENST00000358894 BTBD7Q9P203 1132 aa12.66□□□□□ -0.38
COL20A1-201ENST00000358894 COL4A1P02462 1669 aa12.66□□□□□ -0.38
COL20A1-201ENST00000358894 SDR42E2A6NKP2 422 aa12.66□□□□□ -0.38
COL20A1-201ENST00000358894 TRUB2O95900 331 aaKnown RBP12.66□□□□□ -0.38
COL20A1-201ENST00000358894 FAM200BP0CF97 657 aa12.66□□□□□ -0.38
COL20A1-201ENST00000358894 ZNF143P52747 638 aaPredicted RBP12.66□□□□□ -0.38
COL20A1-201ENST00000358894 DCAF4L1Q3SXM0 396 aa12.66□□□□□ -0.38
COL20A1-201ENST00000358894 SV2CQ496J9 727 aa12.66□□□□□ -0.38
COL20A1-201ENST00000358894 ISLR2Q6UXK2 745 aa12.66□□□□□ -0.38
COL20A1-201ENST00000358894 KLHL23Q8NBE8 558 aa12.66□□□□□ -0.38
COL20A1-201ENST00000358894 SLC2A14Q8TDB8 520 aa12.66□□□□□ -0.38
COL20A1-201ENST00000358894 SGF29Q96ES7 293 aa12.66□□□□□ -0.38
COL20A1-201ENST00000358894 SERPINI1Q99574 410 aa12.66□□□□□ -0.38
COL20A1-201ENST00000358894 ACSS3Q9H6R3 686 aa12.66□□□□□ -0.38
COL20A1-201ENST00000358894 DNAJC16Q9Y2G8 782 aa12.66□□□□□ -0.38
COL20A1-201ENST00000358894 PTPRJQ12913 1337 aa12.66□□□□□ -0.38
COL20A1-201ENST00000358894 KCNA4P22459 653 aa12.66□□□□□ -0.38
COL20A1-201ENST00000358894 YY1P25490 414 aa12.66□□□□□ -0.38
COL20A1-201ENST00000358894 SPRP35270 261 aaPredicted RBP12.66□□□□□ -0.38
COL20A1-201ENST00000358894 STX1BP61266 288 aa12.66□□□□□ -0.38
COL20A1-201ENST00000358894 POU5F1Q01860 360 aaKnown RBP12.66□□□□□ -0.38
COL20A1-201ENST00000358894 XRCC4Q13426 336 aa12.66□□□□□ -0.38
COL20A1-201ENST00000358894 C16orf46Q6P387 395 aa12.66□□□□□ -0.38
COL20A1-201ENST00000358894 VSTM1Q6UX27 236 aa12.66□□□□□ -0.38
COL20A1-201ENST00000358894 LBX2Q6XYB7 198 aa12.66□□□□□ -0.38
COL20A1-201ENST00000358894 POLNQ7Z5Q5 900 aa12.66□□□□□ -0.38
COL20A1-201ENST00000358894 ABI1Q8IZP0 508 aa12.66□□□□□ -0.38
COL20A1-201ENST00000358894 IPMKQ8NFU5 416 aa12.66□□□□□ -0.38
COL20A1-201ENST00000358894 LRGUKQ96M69 825 aa12.66□□□□□ -0.38
COL20A1-201ENST00000358894 B3GNT5Q9BYG0 378 aa12.66□□□□□ -0.38
COL20A1-201ENST00000358894 STARD13Q9Y3M8 1113 aa12.66□□□□□ -0.38
COL20A1-201ENST00000358894 WDR27A2RRH5 827 aa12.65□□□□□ -0.38
COL20A1-201ENST00000358894 C3orf70A6NLC5 250 aaPredicted RBP12.65□□□□□ -0.38
COL20A1-201ENST00000358894 AIM2O14862 343 aa12.65□□□□□ -0.38
COL20A1-201ENST00000358894 PMM2O15305 246 aa12.65□□□□□ -0.38
COL20A1-201ENST00000358894 GMNNO75496 209 aa12.65□□□□□ -0.38
COL20A1-201ENST00000358894 TGM2P21980 687 aa12.65□□□□□ -0.38
COL20A1-201ENST00000358894 ADORA2AP29274 412 aa12.65□□□□□ -0.38
COL20A1-201ENST00000358894 CASP2P42575 452 aa12.65□□□□□ -0.38
COL20A1-201ENST00000358894 SLC6A3Q01959 620 aa12.65□□□□□ -0.38
COL20A1-201ENST00000358894 OCRLQ01968 901 aa12.65□□□□□ -0.38
COL20A1-201ENST00000358894 ADIGQ0VDE8 80 aa12.65□□□□□ -0.38
COL20A1-201ENST00000358894 SLC44A4Q53GD3 710 aa12.65□□□□□ -0.38
COL20A1-201ENST00000358894 UBAP2Q5T6F2 1119 aaKnown RBP12.65□□□□□ -0.38
COL20A1-201ENST00000358894 KRT80Q6KB66 452 aa12.65□□□□□ -0.38
COL20A1-201ENST00000358894 OTOAQ7RTW8 1153 aa12.65□□□□□ -0.38
COL20A1-201ENST00000358894 ECHDC2Q86YB7 292 aa12.65□□□□□ -0.38
COL20A1-201ENST00000358894 DDX1Q92499 740 aaKnown RBP12.65□□□□□ -0.38
COL20A1-201ENST00000358894 RNF157Q96PX1 679 aa12.65□□□□□ -0.38
COL20A1-201ENST00000358894 TBC1D10AQ9BXI6 508 aa12.65□□□□□ -0.38
COL20A1-201ENST00000358894 FAM96AQ9H5X1 160 aa12.65□□□□□ -0.38
COL20A1-201ENST00000358894 TCRBV9S1A1TA0A576 114 aa12.65□□□□□ -0.38
COL20A1-201ENST00000358894 ARF4P18085 180 aaPredicted RBP12.65□□□□□ -0.38
COL20A1-201ENST00000358894 ABCG1P45844 678 aa12.65□□□□□ -0.38
COL20A1-201ENST00000358894 ROR2Q01974 943 aaKnown RBP12.65□□□□□ -0.38
COL20A1-201ENST00000358894 FSTL1Q12841 308 aa12.65□□□□□ -0.38
COL20A1-201ENST00000358894 PCSK7Q16549 785 aa12.65□□□□□ -0.38
COL20A1-201ENST00000358894 DNAL1Q4LDG9 190 aa12.65□□□□□ -0.38
COL20A1-201ENST00000358894 BTBD8Q5XKL5 378 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms