RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 TCF7P36402 384 aaPredicted RBP6.8□□□□□ -1.32
CSDE1-203ENST00000358528 MLH1P40692 756 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 GRIA1P42261 906 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 PTGER2P43116 358 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 PKNOX1P55347 436 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 TGFB2P61812 414 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 TBL3Q12788 808 aaKnown RBP6.8□□□□□ -1.32
CSDE1-203ENST00000358528 USP4Q13107 963 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 NME3Q13232 169 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 CAPSQ13938 189 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 PDPK2PQ6A1A2 396 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 ACOT1Q86TX2 421 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 HPS6Q86YV9 775 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 TRIML2Q8N7C3 387 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 C12orf29Q8N999 325 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 NAT8LQ8N9F0 302 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 SLC35B2Q8TB61 432 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 RNF34Q969K3 372 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 SGF29Q96ES7 293 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 Q9H521 79 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 KCNK4Q9NYG8 393 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 ARHGAP28Q9P2N2 729 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 PLA2G4CQ9UP65 541 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 DTNAQ9Y4J8 743 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 SIGLEC16A6NMB1 481 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 XPO1O14980 1071 aaKnown RBP6.8□□□□□ -1.32
CSDE1-203ENST00000358528 PEX1O43933 1283 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 LSM8O95777 96 aaKnown RBP6.8□□□□□ -1.32
CSDE1-203ENST00000358528 FESP07332 822 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 RARBP10826 455 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 RTP1P59025 263 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 MAP3K21Q5TCX8 1036 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 LRRC38Q5VT99 294 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 RNF135Q8IUD6 432 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 BRSK2Q8IWQ3 736 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 OR6Y1Q8NGX8 325 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 PPP2R3CQ969Q6 453 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 MPP4Q96JB8 637 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 MARK4Q96L34 752 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 FBXL18Q96ME1 805 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 OLFM3Q96PB7 478 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 KLHL4Q9C0H6 718 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 NUMBLQ9Y6R0 609 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 SPAG6O75602 509 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 NPTXRO95502 500 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 DLDP09622 509 aaKnown RBP6.79□□□□□ -1.32
CSDE1-203ENST00000358528 CSH1P0DML2 217 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 CSH2P0DML3 217 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 NELFEP18615 380 aaKnown RBP6.79□□□□□ -1.32
CSDE1-203ENST00000358528 MX2P20592 715 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 EIF4BP23588 611 aaKnown RBP6.79□□□□□ -1.32
CSDE1-203ENST00000358528 PEX2P28328 305 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 ARL1P40616 181 aaPredicted RBP6.79□□□□□ -1.32
CSDE1-203ENST00000358528 YWHAZP63104 245 aaKnown RBP6.79□□□□□ -1.32
CSDE1-203ENST00000358528 PRKD1Q15139 912 aaPredicted RBP6.79□□□□□ -1.32
CSDE1-203ENST00000358528 GOLGA7BQ2TAP0 167 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 FAM47CQ5HY64 1035 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 PPM1JQ5JR12 505 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 NBPF12Q5TAG4 269 aaPredicted RBP6.79□□□□□ -1.32
CSDE1-203ENST00000358528 LAYNQ6UX15 382 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 PTAR1Q7Z6K3 402 aaPredicted RBP6.79□□□□□ -1.32
CSDE1-203ENST00000358528 FAM131BQ86XD5 332 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 WDR49Q8IV35 697 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 MCUQ8NE86 351 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 NLRP7Q8WX94 980 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 ZNF669Q96BR6 464 aaPredicted RBP6.79□□□□□ -1.32
CSDE1-203ENST00000358528 CPB2Q96IY4 423 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 PANX3Q96QZ0 392 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 AS3MTQ9HBK9 375 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 ETNK2Q9NVF9 386 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 WDR35Q9P2L0 1181 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 LNPEPQ9UIQ6 1025 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 TLK1Q9UKI8 766 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 PLLPQ9Y342 182 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 RPS6KL1Q9Y6S9 549 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 RREB1Q92766 1687 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 TNRC6CQ9HCJ0 1690 aaKnown RBP6.79□□□□□ -1.32
CSDE1-203ENST00000358528 WNT10BO00744 389 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 TPP1O14773 563 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 SORBS2O94875 1100 aaKnown RBP6.79□□□□□ -1.32
CSDE1-203ENST00000358528 KLHL2O95198 593 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 TRUB2O95900 331 aaKnown RBP6.79□□□□□ -1.32
CSDE1-203ENST00000358528 ERVK-10P10266 1014 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 MGAT1P26572 445 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 AVPR1AP37288 418 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 CCNFP41002 786 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 PRAMEP78395 509 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 MRPS22P82650 360 aaKnown RBP6.79□□□□□ -1.32
CSDE1-203ENST00000358528 TMEM62Q0P6H9 643 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 CDC16Q13042 620 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 LBRQ14739 615 aaKnown RBP6.79□□□□□ -1.32
CSDE1-203ENST00000358528 SURF1Q15526 300 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 LY6KQ17RY6 165 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 SPDYE2Q495Y8 402 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 GLRA4Q5JXX5 417 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 EEF1DP3Q658K8 133 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 KRT80Q6KB66 452 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 CMC1Q7Z7K0 106 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 CDKL3Q8IVW4 592 aaPredicted RBP6.79□□□□□ -1.32
CSDE1-203ENST00000358528 ARHGAP18Q8N392 663 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms