RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 SUPT20HL2P0C7V6 817 aa5.97□□□□□ -1.45
BRCA1-203ENST00000357654 GARTP22102 1010 aa5.97□□□□□ -1.45
BRCA1-203ENST00000357654 CMA1P23946 247 aa5.97□□□□□ -1.45
BRCA1-203ENST00000357654 ACADLP28330 430 aa5.97□□□□□ -1.45
BRCA1-203ENST00000357654 MAGEA10P43363 369 aaPredicted RBP5.97□□□□□ -1.45
BRCA1-203ENST00000357654 DNASE1L1P49184 302 aa5.97□□□□□ -1.45
BRCA1-203ENST00000357654 TRAP1Q12931 704 aaKnown RBP5.97□□□□□ -1.45
BRCA1-203ENST00000357654 SUSD4Q5VX71 490 aa5.97□□□□□ -1.45
BRCA1-203ENST00000357654 PSRC1Q6PGN9 363 aaPredicted RBP5.97□□□□□ -1.45
BRCA1-203ENST00000357654 LDHDQ86WU2 507 aa5.97□□□□□ -1.45
BRCA1-203ENST00000357654 FAM129CQ86XR2 697 aa5.97□□□□□ -1.45
BRCA1-203ENST00000357654 TTC39CQ8N584 583 aa5.97□□□□□ -1.45
BRCA1-203ENST00000357654 RNF31Q96EP0 1072 aa5.97□□□□□ -1.45
BRCA1-203ENST00000357654 TGS1Q96RS0 853 aaKnown RBP5.97□□□□□ -1.45
BRCA1-203ENST00000357654 YIPF3Q9GZM5 350 aa5.97□□□□□ -1.45
BRCA1-203ENST00000357654 ADAMTS1Q9UHI8 967 aa5.97□□□□□ -1.45
BRCA1-203ENST00000357654 GGA2Q9UJY4 613 aa5.97□□□□□ -1.45
BRCA1-203ENST00000357654 PCDHB15Q9Y5E8 787 aa5.97□□□□□ -1.45
BRCA1-203ENST00000357654 PALLDQ8WX93 1383 aa5.96□□□□□ -1.45
BRCA1-203ENST00000357654 IGSF1Q8N6C5 1336 aa5.96□□□□□ -1.45
BRCA1-203ENST00000357654 CPED1A4D0V7 1026 aa5.96□□□□□ -1.45
BRCA1-203ENST00000357654 FAM227AF5H4B4 570 aa5.96□□□□□ -1.45
BRCA1-203ENST00000357654 PCCAP05165 728 aaPredicted RBP5.96□□□□□ -1.45
BRCA1-203ENST00000357654 CCDC166P0CW27 439 aa5.96□□□□□ -1.45
BRCA1-203ENST00000357654 ITGALP20701 1170 aa5.96□□□□□ -1.45
BRCA1-203ENST00000357654 GLRBP48167 497 aa5.96□□□□□ -1.45
BRCA1-203ENST00000357654 CASP6P55212 293 aa5.96□□□□□ -1.45
BRCA1-203ENST00000357654 PER3P56645 1201 aa5.96□□□□□ -1.45
BRCA1-203ENST00000357654 MLLT1Q03111 559 aaPredicted RBP5.96□□□□□ -1.45
BRCA1-203ENST00000357654 LAMB3Q13751 1172 aa5.96□□□□□ -1.45
BRCA1-203ENST00000357654 TRADDQ15628 312 aa5.96□□□□□ -1.45
BRCA1-203ENST00000357654 RNASE12Q5GAN4 147 aaKnown RBP5.96□□□□□ -1.45
BRCA1-203ENST00000357654 RSBN1Q5VWQ0 802 aaPredicted RBP5.96□□□□□ -1.45
BRCA1-203ENST00000357654 MTHFD1LQ6UB35 978 aa5.96□□□□□ -1.45
BRCA1-203ENST00000357654 HSDL2Q6YN16 418 aa5.96□□□□□ -1.45
BRCA1-203ENST00000357654 LRRC49Q8IUZ0 686 aa5.96□□□□□ -1.45
BRCA1-203ENST00000357654 FBXO16Q8IX29 292 aaPredicted RBP5.96□□□□□ -1.45
BRCA1-203ENST00000357654 OR10Q1Q8NGQ4 319 aa5.96□□□□□ -1.45
BRCA1-203ENST00000357654 SLC20A1Q8WUM9 679 aa5.96□□□□□ -1.45
BRCA1-203ENST00000357654 THRSPQ92748 146 aa5.96□□□□□ -1.45
BRCA1-203ENST00000357654 TP53INP1Q96A56 240 aa5.96□□□□□ -1.45
BRCA1-203ENST00000357654 RBBP8Q99708 897 aa5.96□□□□□ -1.45
BRCA1-203ENST00000357654 PI4K2AQ9BTU6 479 aa5.96□□□□□ -1.45
BRCA1-203ENST00000357654 ADPRHL2Q9NX46 363 aa5.96□□□□□ -1.45
BRCA1-203ENST00000357654 STOML2Q9UJZ1 356 aa5.96□□□□□ -1.45
BRCA1-203ENST00000357654 NCOA1Q15788 1441 aa5.96□□□□□ -1.45
BRCA1-203ENST00000357654 CDK13Q14004 1512 aaKnown RBP5.96□□□□□ -1.46
BRCA1-203ENST00000357654 UGGT2Q9NYU1 1516 aa5.96□□□□□ -1.46
BRCA1-203ENST00000357654 H0Y858 1186 aa5.96□□□□□ -1.46
BRCA1-203ENST00000357654 TP73O15350 636 aa5.96□□□□□ -1.46
BRCA1-203ENST00000357654 TMCC2O75069 709 aa5.96□□□□□ -1.46
BRCA1-203ENST00000357654 USP1O94782 785 aa5.96□□□□□ -1.46
BRCA1-203ENST00000357654 DPEP1P16444 411 aa5.96□□□□□ -1.46
BRCA1-203ENST00000357654 FGFR4P22455 802 aa5.96□□□□□ -1.46
BRCA1-203ENST00000357654 ADSLP30566 484 aaPredicted RBP5.96□□□□□ -1.46
BRCA1-203ENST00000357654 RAP1GAPP47736 663 aa5.96□□□□□ -1.46
BRCA1-203ENST00000357654 BCAP31P51572 246 aa5.96□□□□□ -1.46
BRCA1-203ENST00000357654 DEFA1P59665 94 aa5.96□□□□□ -1.46
BRCA1-203ENST00000357654 DEFA3P59666 94 aa5.96□□□□□ -1.46
BRCA1-203ENST00000357654 SKP1P63208 163 aa5.96□□□□□ -1.46
BRCA1-203ENST00000357654 PTK6Q13882 451 aa5.96□□□□□ -1.46
BRCA1-203ENST00000357654 EIF2S3LQ2VIR3 472 aaKnown RBP5.96□□□□□ -1.46
BRCA1-203ENST00000357654 C8orf34Q49A92 452 aa5.96□□□□□ -1.46
BRCA1-203ENST00000357654 IZUMO3Q5VZ72 239 aa5.96□□□□□ -1.46
BRCA1-203ENST00000357654 SERPINA13PQ6UXR4 307 aa5.96□□□□□ -1.46
BRCA1-203ENST00000357654 RBM43Q6ZSC3 357 aaKnown RBP5.96□□□□□ -1.46
BRCA1-203ENST00000357654 ATG9AQ7Z3C6 839 aa5.96□□□□□ -1.46
BRCA1-203ENST00000357654 ZNF248Q8NDW4 579 aa5.96□□□□□ -1.46
BRCA1-203ENST00000357654 SPPL2AQ8TCT8 520 aa5.96□□□□□ -1.46
BRCA1-203ENST00000357654 RAD51AP1Q96B01 352 aa5.96□□□□□ -1.46
BRCA1-203ENST00000357654 IFT52Q9Y366 437 aa5.96□□□□□ -1.46
BRCA1-203ENST00000357654 DAGLAQ9Y4D2 1042 aa5.96□□□□□ -1.46
BRCA1-203ENST00000357654 EMSYQ7Z589 1322 aa5.96□□□□□ -1.46
BRCA1-203ENST00000357654 TEX14Q8IWB6 1497 aa5.96□□□□□ -1.46
BRCA1-203ENST00000357654 TRDMT1O14717 391 aaKnown RBP5.96□□□□□ -1.46
BRCA1-203ENST00000357654 KERAO60938 352 aa5.96□□□□□ -1.46
BRCA1-203ENST00000357654 TYMPP19971 482 aa5.96□□□□□ -1.46
BRCA1-203ENST00000357654 GUCY2CP25092 1073 aa5.96□□□□□ -1.46
BRCA1-203ENST00000357654 RANBP1P43487 201 aa5.96□□□□□ -1.46
BRCA1-203ENST00000357654 IKBKEQ14164 716 aa5.96□□□□□ -1.46
BRCA1-203ENST00000357654 KLHL12Q53G59 568 aa5.96□□□□□ -1.46
BRCA1-203ENST00000357654 CHRDL2Q6WN34 429 aa5.96□□□□□ -1.46
BRCA1-203ENST00000357654 TMPRSS9Q7Z410 1059 aa5.96□□□□□ -1.46
BRCA1-203ENST00000357654 BRSK1Q8TDC3 778 aa5.96□□□□□ -1.46
BRCA1-203ENST00000357654 KCNB2Q92953 911 aa5.96□□□□□ -1.46
BRCA1-203ENST00000357654 C18orf8Q96DM3 657 aa5.96□□□□□ -1.46
BRCA1-203ENST00000357654 RNPC3Q96LT9 517 aaKnown RBP5.96□□□□□ -1.46
BRCA1-203ENST00000357654 TSC22D3Q99576 134 aa5.96□□□□□ -1.46
BRCA1-203ENST00000357654 EIF2AK1Q9BQI3 630 aaKnown RBP5.96□□□□□ -1.46
BRCA1-203ENST00000357654 CLEC4MQ9H2X3 399 aaPredicted RBP5.96□□□□□ -1.46
BRCA1-203ENST00000357654 TMEM138Q9NPI0 162 aa5.96□□□□□ -1.46
BRCA1-203ENST00000357654 WDR35Q9P2L0 1181 aa5.96□□□□□ -1.46
BRCA1-203ENST00000357654 FAM220BPB1ANY3 271 aa5.96□□□□□ -1.46
BRCA1-203ENST00000357654 H3BUI4 141 aa5.96□□□□□ -1.46
BRCA1-203ENST00000357654 WWP2O00308 870 aa5.96□□□□□ -1.46
BRCA1-203ENST00000357654 SLC2A4P14672 509 aa5.96□□□□□ -1.46
BRCA1-203ENST00000357654 NFKB1P19838 968 aa5.96□□□□□ -1.46
BRCA1-203ENST00000357654 NR1D1P20393 614 aa5.96□□□□□ -1.46
BRCA1-203ENST00000357654 NT5C2P49902 561 aa5.96□□□□□ -1.46
BRCA1-203ENST00000357654 AP1S1P61966 158 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms